RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 SLC24A1O60721 1099 aa24.77■■□□□ 1.56
COPS6-206ENST00000468499 MMP10P09238 476 aa24.77■■□□□ 1.56
COPS6-206ENST00000468499 ATG3Q9NT62 314 aa24.77■■□□□ 1.56
COPS6-206ENST00000468499 PHKG2P15735 406 aa24.76■■□□□ 1.55
COPS6-206ENST00000468499 HMGB2P26583 209 aaKnown RBP24.76■■□□□ 1.55
COPS6-206ENST00000468499 MYH14Q7Z406 1995 aaKnown RBP24.76■■□□□ 1.55
COPS6-206ENST00000468499 ATP6V1AP38606 617 aa24.75■■□□□ 1.55
COPS6-206ENST00000468499 TMOD3Q9NYL9 352 aa24.75■■□□□ 1.55
COPS6-206ENST00000468499 WASHC2AQ641Q2 1341 aa24.75■■□□□ 1.55
COPS6-206ENST00000468499 DNAJC5GQ8N7S2 189 aa24.74■■□□□ 1.55
COPS6-206ENST00000468499 SPG7Q9UQ90 795 aa24.74■■□□□ 1.55
COPS6-206ENST00000468499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.73■■□□□ 1.557e-6■■□□□ 12.8
COPS6-206ENST00000468499 ARFGEF1Q9Y6D6 1849 aa24.72■■□□□ 1.55
COPS6-206ENST00000468499 WDR90Q96KV7 1748 aa24.72■■□□□ 1.55
COPS6-206ENST00000468499 A0A0G2JLW4 131 aa24.71■■□□□ 1.55
COPS6-206ENST00000468499 PPM1GO15355 546 aaPredicted RBP24.71■■□□□ 1.55
COPS6-206ENST00000468499 NMRK2Q9NPI5 230 aa24.7■■□□□ 1.54
COPS6-206ENST00000468499 POLKQ9UBT6 870 aa24.7■■□□□ 1.54
COPS6-206ENST00000468499 IFNL2Q8IZJ0 200 aa24.69■■□□□ 1.54
COPS6-206ENST00000468499 BCS1LQ9Y276 419 aa24.68■■□□□ 1.54
COPS6-206ENST00000468499 ADAMTS7Q9UKP4 1686 aa24.68■■□□□ 1.54
COPS6-206ENST00000468499 KDM6AO15550 1401 aaPredicted RBP24.68■■□□□ 1.54
COPS6-206ENST00000468499 GYS1P13807 737 aa24.67■■□□□ 1.54
COPS6-206ENST00000468499 DPEP1P16444 411 aa24.67■■□□□ 1.54
COPS6-206ENST00000468499 KCNA3P22001 575 aa24.67■■□□□ 1.54
COPS6-206ENST00000468499 TGFB2P61812 414 aa24.67■■□□□ 1.54
COPS6-206ENST00000468499 TJP1Q07157 1748 aa24.66■■□□□ 1.54
COPS6-206ENST00000468499 TOMM70O94826 608 aa24.66■■□□□ 1.54
COPS6-206ENST00000468499 APLP1P51693 650 aa24.66■■□□□ 1.54
COPS6-206ENST00000468499 EIF4A2Q14240 407 aaKnown RBP24.66■■□□□ 1.54
COPS6-206ENST00000468499 ARHGEF1Q92888 912 aaKnown RBP24.66■■□□□ 1.54
COPS6-206ENST00000468499 PCNTO95613 3336 aa24.64■■□□□ 1.54
COPS6-206ENST00000468499 TRAPPC3LQ5T215 181 aa24.64■■□□□ 1.54
COPS6-206ENST00000468499 CNTNAP4Q9C0A0 1308 aa24.63■■□□□ 1.53
COPS6-206ENST00000468499 RTCBQ9Y3I0 505 aaKnown RBP24.63■■□□□ 1.53
COPS6-206ENST00000468499 SBF1O95248 1867 aa24.62■■□□□ 1.53
COPS6-206ENST00000468499 HTRA3P83110 453 aa24.62■■□□□ 1.53
COPS6-206ENST00000468499 NLGN1Q8N2Q7 840 aa24.62■■□□□ 1.53
COPS6-206ENST00000468499 PLEKHG2Q9H7P9 1386 aa24.62■■□□□ 1.53
COPS6-206ENST00000468499 CDCA8Q53HL2 280 aa24.61■■□□□ 1.53
COPS6-206ENST00000468499 RC3H1Q5TC82 1133 aaKnown RBP24.61■■□□□ 1.53
COPS6-206ENST00000468499 ARHGAP27Q6ZUM4 889 aa24.61■■□□□ 1.53
COPS6-206ENST00000468499 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
COPS6-206ENST00000468499 KCPQ6ZWJ8 1503 aa24.6■■□□□ 1.53
COPS6-206ENST00000468499 RPS6KA4O75676 772 aa24.59■■□□□ 1.53
COPS6-206ENST00000468499 FCHSD2O94868 740 aa24.59■■□□□ 1.53
COPS6-206ENST00000468499 ERVV-2B6SEH9 535 aa24.58■■□□□ 1.53
COPS6-206ENST00000468499 ADRA2BP18089 450 aa24.58■■□□□ 1.53
COPS6-206ENST00000468499 CCDC87Q9NVE4 849 aa24.58■■□□□ 1.53
COPS6-206ENST00000468499 DDR1Q08345 913 aa24.57■■□□□ 1.52
COPS6-206ENST00000468499 C9orf131Q5VYM1 1079 aa24.57■■□□□ 1.52
COPS6-206ENST00000468499 SRP68Q9UHB9 627 aaKnown RBP24.57■■□□□ 1.52
COPS6-206ENST00000468499 TNRC6CQ9HCJ0 1690 aaKnown RBP24.56■■□□□ 1.52
COPS6-206ENST00000468499 RBM46Q8TBY0 533 aaKnown RBP24.55■■□□□ 1.52
COPS6-206ENST00000468499 DCAF5Q96JK2 942 aa24.55■■□□□ 1.52
COPS6-206ENST00000468499 RFC4P35249 363 aa24.54■■□□□ 1.52
COPS6-206ENST00000468499 TNNT2P45379 298 aaPredicted RBP24.54■■□□□ 1.52
COPS6-206ENST00000468499 FKBP8Q14318 412 aa24.54■■□□□ 1.52
COPS6-206ENST00000468499 SCN11AQ9UI33 1791 aa24.54■■□□□ 1.52
COPS6-206ENST00000468499 PARP3Q9Y6F1 533 aa24.53■■□□□ 1.52
COPS6-206ENST00000468499 USP42Q9H9J4 1324 aaKnown RBP24.53■■□□□ 1.52
COPS6-206ENST00000468499 AFDNP55196 1824 aaKnown RBP24.52■■□□□ 1.52
COPS6-206ENST00000468499 AEBP1Q8IUX7 1158 aa24.52■■□□□ 1.52
COPS6-206ENST00000468499 CHRNA5P30532 468 aa24.51■■□□□ 1.51
COPS6-206ENST00000468499 CRKLP46109 303 aaKnown RBP24.51■■□□□ 1.51
COPS6-206ENST00000468499 JMYQ8N9B5 988 aa24.51■■□□□ 1.51
COPS6-206ENST00000468499 NRXN2Q9P2S2 1712 aa24.5■■□□□ 1.51
COPS6-206ENST00000468499 DLEC1Q9Y238 1755 aa24.5■■□□□ 1.51
COPS6-206ENST00000468499 COL13A1Q5TAT6 717 aaPredicted RBP24.5■■□□□ 1.51
COPS6-206ENST00000468499 KLRG1Q96E93 195 aa24.5■■□□□ 1.51
COPS6-206ENST00000468499 PTCD1O75127 700 aaKnown RBP24.49■■□□□ 1.51
COPS6-206ENST00000468499 ZNF530Q6P9A1 599 aaPredicted RBP24.49■■□□□ 1.51
COPS6-206ENST00000468499 PIM2Q9P1W9 311 aa24.49■■□□□ 1.51
COPS6-206ENST00000468499 PRELPP51888 382 aa24.48■■□□□ 1.51
COPS6-206ENST00000468499 CABP4P57796 275 aa24.48■■□□□ 1.51
COPS6-206ENST00000468499 VIRMAQ69YN4 1812 aaKnown RBP24.48■■□□□ 1.51
COPS6-206ENST00000468499 POLRMTO00411 1230 aaKnown RBP24.47■■□□□ 1.51
COPS6-206ENST00000468499 HSP90AB1P08238 724 aaKnown RBP24.47■■□□□ 1.51
COPS6-206ENST00000468499 INTS5Q6P9B9 1019 aaKnown RBP24.47■■□□□ 1.51
COPS6-206ENST00000468499 RNF181Q9P0P0 153 aa24.47■■□□□ 1.51
COPS6-206ENST00000468499 PLEKHO1Q53GL0 409 aaPredicted RBP24.46■■□□□ 1.51
COPS6-206ENST00000468499 DALRD3Q5D0E6 543 aaKnown RBP24.46■■□□□ 1.51
COPS6-206ENST00000468499 TIAM2Q8IVF5 1701 aa24.45■■□□□ 1.5
COPS6-206ENST00000468499 TM4SF1P30408 202 aa24.45■■□□□ 1.5
COPS6-206ENST00000468499 FSTL1Q12841 308 aa24.45■■□□□ 1.5
COPS6-206ENST00000468499 NFATC2IPQ8NCF5 419 aa24.45■■□□□ 1.5
COPS6-206ENST00000468499 RRAGCQ9HB90 399 aa24.45■■□□□ 1.5
COPS6-206ENST00000468499 RASSF7Q02833 373 aa24.43■■□□□ 1.5
COPS6-206ENST00000468499 CCDC88AQ3V6T2 1871 aa24.43■■□□□ 1.5
COPS6-206ENST00000468499 MTHFSP49914 203 aa24.42■■□□□ 1.5
COPS6-206ENST00000468499 AMOTQ4VCS5 1084 aa24.42■■□□□ 1.5
COPS6-206ENST00000468499 MRC1P22897 1456 aa24.42■■□□□ 1.5
COPS6-206ENST00000468499 KDM2BQ8NHM5 1336 aa24.4■■□□□ 1.5
COPS6-206ENST00000468499 DNAJC10Q8IXB1 793 aa24.4■■□□□ 1.5
COPS6-206ENST00000468499 SOS1Q07889 1333 aaPredicted RBP24.39■■□□□ 1.5
COPS6-206ENST00000468499 USPL1Q5W0Q7 1092 aa24.39■■□□□ 1.49
COPS6-206ENST00000468499 C16orf71Q8IYS4 520 aaPredicted RBP24.39■■□□□ 1.49
COPS6-206ENST00000468499 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
COPS6-206ENST00000468499 ANKRD31Q8N7Z5 1873 aa24.38■■□□□ 1.49
COPS6-206ENST00000468499 CARMIL3Q8ND23 1372 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms