RNA–Protein interactions for RNA: ENST00000467722.2

SPECC1-208, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, human

TSL 2

Gene SPECC1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPECC1-208	ENST00000467722	COL5A3	P25940	1745 aa	Predicted RBP	33.41	■■■□□ 2.94
SPECC1-208	ENST00000467722	PXDNL	A1KZ92	1463 aa		33.4	■■■□□ 2.94
SPECC1-208	ENST00000467722	PHKG2	P15735	406 aa		33.4	■■■□□ 2.94
SPECC1-208	ENST00000467722	KDR	P35968	1356 aa		33.39	■■■□□ 2.94
SPECC1-208	ENST00000467722	PLEKHG2	Q9H7P9	1386 aa		33.38	■■■□□ 2.93
SPECC1-208	ENST00000467722	BRCA1	P38398	1863 aa	Known RBP	33.38	■■■□□ 2.93
SPECC1-208	ENST00000467722	ATP6V1A	P38606	617 aa		33.38	■■■□□ 2.93
SPECC1-208	ENST00000467722	IFNL2	Q8IZJ0	200 aa		33.38	■■■□□ 2.93
SPECC1-208	ENST00000467722	KIF3C	O14782	793 aa		33.36	■■■□□ 2.93
SPECC1-208	ENST00000467722	ATG3	Q9NT62	314 aa		33.36	■■■□□ 2.93
SPECC1-208	ENST00000467722	MMP10	P09238	476 aa		33.35	■■■□□ 2.93
SPECC1-208	ENST00000467722	POLK	Q9UBT6	870 aa		33.34	■■■□□ 2.93
SPECC1-208	ENST00000467722	C4A	P0C0L4	1744 aa		33.33	■■■□□ 2.93
SPECC1-208	ENST00000467722	C10orf71	Q711Q0	1435 aa		33.33	■■■□□ 2.93
SPECC1-208	ENST00000467722	MYH14	Q7Z406	1995 aa	Known RBP	33.3	■■■□□ 2.92
SPECC1-208	ENST00000467722	EIF4A2	Q14240	407 aa	Known RBP	33.28	■■■□□ 2.92
SPECC1-208	ENST00000467722	SLC4A9	Q96Q91	983 aa		33.28	■■■□□ 2.92
SPECC1-208	ENST00000467722	ARFGEF1	Q9Y6D6	1849 aa		33.28	■■■□□ 2.92
SPECC1-208	ENST00000467722	TGFB2	P61812	414 aa		33.27	■■■□□ 2.92
SPECC1-208	ENST00000467722	RTCB	Q9Y3I0	505 aa	Known RBP	33.27	■■■□□ 2.92
SPECC1-208	ENST00000467722	TRAPPC3L	Q5T215	181 aa		33.25	■■■□□ 2.91
SPECC1-208	ENST00000467722	NLGN1	Q8N2Q7	840 aa		33.25	■■■□□ 2.91
SPECC1-208	ENST00000467722	ERVV-2	B6SEH9	535 aa		33.24	■■■□□ 2.91
SPECC1-208	ENST00000467722	CNTNAP4	Q9C0A0	1308 aa		33.24	■■■□□ 2.91
SPECC1-208	ENST00000467722	ADRA2B	P18089	450 aa		33.23	■■■□□ 2.91
SPECC1-208	ENST00000467722	RC3H1	Q5TC82	1133 aa	Known RBP	33.23	■■■□□ 2.91
SPECC1-208	ENST00000467722		A0A0G2JLW4	131 aa		33.22	■■■□□ 2.91
SPECC1-208	ENST00000467722	BCS1L	Q9Y276	419 aa		33.22	■■■□□ 2.91
SPECC1-208	ENST00000467722	KDM6A	O15550	1401 aa	Predicted RBP	33.21	■■■□□ 2.91
SPECC1-208	ENST00000467722	ARHGEF1	Q92888	912 aa	Known RBP	33.21	■■■□□ 2.91
SPECC1-208	ENST00000467722	GYS1	P13807	737 aa		33.2	■■■□□ 2.91
SPECC1-208	ENST00000467722	DCAF5	Q96JK2	942 aa		33.2	■■■□□ 2.91
SPECC1-208	ENST00000467722	RBM42	Q9BTD8	480 aa	Known RBP	33.19	■■■□□ 2.9
SPECC1-208	ENST00000467722	CCDC87	Q9NVE4	849 aa		33.18	■■■□□ 2.9
SPECC1-208	ENST00000467722	TJP1	Q07157	1748 aa		33.17	■■■□□ 2.9
SPECC1-208	ENST00000467722	RPS6KA4	O75676	772 aa		33.17	■■■□□ 2.9
SPECC1-208	ENST00000467722	HSP90AB1	P08238	724 aa	Known RBP	33.17	■■■□□ 2.9
SPECC1-208	ENST00000467722	TNNT2	P45379	298 aa	Predicted RBP	33.17	■■■□□ 2.9
SPECC1-208	ENST00000467722	APLP1	P51693	650 aa		33.17	■■■□□ 2.9
SPECC1-208	ENST00000467722	TOMM70	O94826	608 aa		33.16	■■■□□ 2.9
SPECC1-208	ENST00000467722	DPEP1	P16444	411 aa		33.16	■■■□□ 2.9
SPECC1-208	ENST00000467722	WDR90	Q96KV7	1748 aa		33.14	■■■□□ 2.9
SPECC1-208	ENST00000467722	RFC4	P35249	363 aa		33.14	■■■□□ 2.9
SPECC1-208	ENST00000467722	ARHGAP27	Q6ZUM4	889 aa		33.14	■■■□□ 2.9
SPECC1-208	ENST00000467722	PARP3	Q9Y6F1	533 aa		33.13	■■■□□ 2.89
SPECC1-208	ENST00000467722	FCHSD2	O94868	740 aa		33.12	■■■□□ 2.89
SPECC1-208	ENST00000467722	ADAMTS7	Q9UKP4	1686 aa		33.12	■■■□□ 2.89
SPECC1-208	ENST00000467722	SCN11A	Q9UI33	1791 aa		33.11	■■■□□ 2.89
SPECC1-208	ENST00000467722	KCNA3	P22001	575 aa		33.11	■■■□□ 2.89
SPECC1-208	ENST00000467722	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.11	■■■□□ 2.89
SPECC1-208	ENST00000467722	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.11	■■■□□ 2.89
SPECC1-208	ENST00000467722	NMRK2	Q9NPI5	230 aa		33.11	■■■□□ 2.89
SPECC1-208	ENST00000467722	DNAJC5G	Q8N7S2	189 aa		33.1	■■■□□ 2.89
SPECC1-208	ENST00000467722	CABP4	P57796	275 aa		33.09	■■■□□ 2.89
SPECC1-208	ENST00000467722	SBF1	O95248	1867 aa		33.09	■■■□□ 2.89
SPECC1-208	ENST00000467722	AMOT	Q4VCS5	1084 aa		33.08	■■■□□ 2.89
SPECC1-208	ENST00000467722	TIMELESS	Q9UNS1	1208 aa		33.07	■■■□□ 2.88
SPECC1-208	ENST00000467722	CRKL	P46109	303 aa	Known RBP	33.05	■■■□□ 2.88
SPECC1-208	ENST00000467722	USP42	Q9H9J4	1324 aa	Known RBP	33.04	■■■□□ 2.88
SPECC1-208	ENST00000467722	PTCD1	O75127	700 aa	Known RBP	33.04	■■■□□ 2.88
SPECC1-208	ENST00000467722	C9orf131	Q5VYM1	1079 aa		33.04	■■■□□ 2.88
SPECC1-208	ENST00000467722	POLR3GL	Q9BT43	218 aa		33.04	■■■□□ 2.88
SPECC1-208	ENST00000467722	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.04	■■■□□ 2.88
SPECC1-208	ENST00000467722	PCNT	O95613	3336 aa		33.04	■■■□□ 2.88
SPECC1-208	ENST00000467722	VIRMA	Q69YN4	1812 aa	Known RBP	33.03	■■■□□ 2.88
SPECC1-208	ENST00000467722	MTHFS	P49914	203 aa		33.03	■■■□□ 2.88
SPECC1-208	ENST00000467722	AEBP1	Q8IUX7	1158 aa		33.03	■■■□□ 2.88
SPECC1-208	ENST00000467722	PIM2	Q9P1W9	311 aa		33.03	■■■□□ 2.88
SPECC1-208	ENST00000467722	SRP68	Q9UHB9	627 aa	Known RBP	33.03	■■■□□ 2.88
SPECC1-208	ENST00000467722	DDR1	Q08345	913 aa		33.02	■■■□□ 2.88
SPECC1-208	ENST00000467722	RBM46	Q8TBY0	533 aa	Known RBP	33.02	■■■□□ 2.88
SPECC1-208	ENST00000467722	FKBP8	Q14318	412 aa		33.01	■■■□□ 2.87
SPECC1-208	ENST00000467722	C1orf141	Q5JVX7	400 aa		33	■■■□□ 2.87
SPECC1-208	ENST00000467722	NFATC2IP	Q8NCF5	419 aa		33	■■■□□ 2.87
SPECC1-208	ENST00000467722	KCP	Q6ZWJ8	1503 aa		33	■■■□□ 2.87
SPECC1-208	ENST00000467722	AFDN	P55196	1824 aa	Known RBP	32.99	■■■□□ 2.87
SPECC1-208	ENST00000467722	DALRD3	Q5D0E6	543 aa	Known RBP	32.98	■■■□□ 2.87
SPECC1-208	ENST00000467722	PANK3	Q9H999	370 aa		32.97	■■■□□ 2.87
SPECC1-208	ENST00000467722	DLEC1	Q9Y238	1755 aa		32.96	■■■□□ 2.87
SPECC1-208	ENST00000467722	NRXN2	Q9P2S2	1712 aa		32.96	■■■□□ 2.87
SPECC1-208	ENST00000467722	TRIM26	Q12899	539 aa	Predicted RBP	32.95	■■■□□ 2.87
SPECC1-208	ENST00000467722	INTS5	Q6P9B9	1019 aa	Known RBP	32.95	■■■□□ 2.87
SPECC1-208	ENST00000467722	POLRMT	O00411	1230 aa	Known RBP	32.94	■■■□□ 2.86
SPECC1-208	ENST00000467722	SULT6B1	Q6IMI4	303 aa		32.93	■■■□□ 2.86
SPECC1-208	ENST00000467722	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.93	■■■□□ 2.86
SPECC1-208	ENST00000467722	RNF181	Q9P0P0	153 aa		32.93	■■■□□ 2.86
SPECC1-208	ENST00000467722	KDM2B	Q8NHM5	1336 aa		32.93	■■■□□ 2.86
SPECC1-208	ENST00000467722	MRC1	P22897	1456 aa		32.93	■■■□□ 2.86
SPECC1-208	ENST00000467722	TM4SF1	P30408	202 aa		32.92	■■■□□ 2.86
SPECC1-208	ENST00000467722	CHRNA5	P30532	468 aa		32.92	■■■□□ 2.86
SPECC1-208	ENST00000467722	FSTL1	Q12841	308 aa		32.92	■■■□□ 2.86
SPECC1-208	ENST00000467722	MORC1	Q86VD1	984 aa		32.89	■■■□□ 2.86
SPECC1-208	ENST00000467722	SOS1	Q07889	1333 aa	Predicted RBP	32.88	■■■□□ 2.85
SPECC1-208	ENST00000467722	HTRA3	P83110	453 aa		32.88	■■■□□ 2.85
SPECC1-208	ENST00000467722	KLRG1	Q96E93	195 aa		32.88	■■■□□ 2.85
SPECC1-208	ENST00000467722	CLSPN	Q9HAW4	1339 aa		32.87	■■■□□ 2.85
SPECC1-208	ENST00000467722	IL13	P35225	146 aa		32.87	■■■□□ 2.85
SPECC1-208	ENST00000467722	DNAJC10	Q8IXB1	793 aa		32.86	■■■□□ 2.85
SPECC1-208	ENST00000467722	JMY	Q8N9B5	988 aa		32.86	■■■□□ 2.85
SPECC1-208	ENST00000467722	CCDC88A	Q3V6T2	1871 aa		32.86	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms