RNA–Protein interactions for RNA: ENST00000467716.1

C1GALT1-206, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 5

Gene C1GALT1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-206ENST00000467716 AMIGO3Q86WK7 504 aa23.54■■□□□ 1.36
C1GALT1-206ENST00000467716 C4BP0C0L5 1744 aa23.53■■□□□ 1.36
C1GALT1-206ENST00000467716 NKX1-1Q15270 411 aaPredicted RBP23.53■■□□□ 1.36
C1GALT1-206ENST00000467716 LOC102724428A0A0B4J2F2 783 aa23.52■■□□□ 1.36
C1GALT1-206ENST00000467716 PPP2R1AP30153 589 aa23.52■■□□□ 1.36
C1GALT1-206ENST00000467716 IL13P35225 146 aa23.52■■□□□ 1.36
C1GALT1-206ENST00000467716 SIK1P57059 783 aa23.52■■□□□ 1.36
C1GALT1-206ENST00000467716 RALBP1Q15311 655 aa23.52■■□□□ 1.36
C1GALT1-206ENST00000467716 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
C1GALT1-206ENST00000467716 WWC3Q9ULE0 1092 aa23.51■■□□□ 1.35
C1GALT1-206ENST00000467716 ITGB4P16144 1822 aa23.51■■□□□ 1.35
C1GALT1-206ENST00000467716 TAF1LQ8IZX4 1826 aa23.51■■□□□ 1.35
C1GALT1-206ENST00000467716 IFNL2Q8IZJ0 200 aa23.5■■□□□ 1.35
C1GALT1-206ENST00000467716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.5■■□□□ 1.35
C1GALT1-206ENST00000467716 ASAP1Q9ULH1 1129 aa23.5■■□□□ 1.35
C1GALT1-206ENST00000467716 GNPATO15228 680 aa23.49■■□□□ 1.35
C1GALT1-206ENST00000467716 PHKG2P15735 406 aa23.49■■□□□ 1.35
C1GALT1-206ENST00000467716 SSFA2P28290 1259 aa23.49■■□□□ 1.35
C1GALT1-206ENST00000467716 ATP6V1AP38606 617 aa23.48■■□□□ 1.35
C1GALT1-206ENST00000467716 NUDCQ9Y266 331 aa23.48■■□□□ 1.35
C1GALT1-206ENST00000467716 SULT6B1Q6IMI4 303 aa23.47■■□□□ 1.35
C1GALT1-206ENST00000467716 ATP10DQ9P241 1426 aa23.47■■□□□ 1.35
C1GALT1-206ENST00000467716 COL3A1P02461 1466 aaPredicted RBP23.46■■□□□ 1.35
C1GALT1-206ENST00000467716 KDRP35968 1356 aa23.46■■□□□ 1.35
C1GALT1-206ENST00000467716 ITPK1Q13572 414 aa23.46■■□□□ 1.35
C1GALT1-206ENST00000467716 AMOTQ4VCS5 1084 aa23.45■■□□□ 1.34
C1GALT1-206ENST00000467716 PLEKHO1Q53GL0 409 aaPredicted RBP23.45■■□□□ 1.34
C1GALT1-206ENST00000467716 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
C1GALT1-206ENST00000467716 ATG3Q9NT62 314 aa23.44■■□□□ 1.34
C1GALT1-206ENST00000467716 UBR3Q6ZT12 1888 aa23.43■■□□□ 1.34
C1GALT1-206ENST00000467716 ZNF526Q8TF50 670 aaPredicted RBP23.43■■□□□ 1.34
C1GALT1-206ENST00000467716 GPBP1L1Q9HC44 474 aaPredicted RBP23.42■■□□□ 1.34
C1GALT1-206ENST00000467716 AEBP1Q8IUX7 1158 aa23.41■■□□□ 1.34
C1GALT1-206ENST00000467716 RBM42Q9BTD8 480 aaKnown RBP23.41■■□□□ 1.34
C1GALT1-206ENST00000467716 MYBBP1AQ9BQG0 1328 aaKnown RBP23.4■■□□□ 1.34
C1GALT1-206ENST00000467716 HSP90AB1P08238 724 aaKnown RBP23.4■■□□□ 1.34
C1GALT1-206ENST00000467716 MMP10P09238 476 aa23.39■■□□□ 1.33
C1GALT1-206ENST00000467716 HMOX1P09601 288 aa23.39■■□□□ 1.33
C1GALT1-206ENST00000467716 C1orf141Q5JVX7 400 aa23.38■■□□□ 1.33
C1GALT1-206ENST00000467716 RTCBQ9Y3I0 505 aaKnown RBP23.38■■□□□ 1.33
C1GALT1-206ENST00000467716 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
C1GALT1-206ENST00000467716 ERVV-2B6SEH9 535 aa23.36■■□□□ 1.33
C1GALT1-206ENST00000467716 TRAPPC3LQ5T215 181 aa23.36■■□□□ 1.33
C1GALT1-206ENST00000467716 DCAF5Q96JK2 942 aa23.36■■□□□ 1.33
C1GALT1-206ENST00000467716 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
C1GALT1-206ENST00000467716 CABP4P57796 275 aa23.35■■□□□ 1.33
C1GALT1-206ENST00000467716 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.334e-9■□□□□ 11.3
C1GALT1-206ENST00000467716 PRKRIP1Q9H875 184 aaPredicted RBP23.35■■□□□ 1.33
C1GALT1-206ENST00000467716 ADCY9O60503 1353 aa23.35■■□□□ 1.33
C1GALT1-206ENST00000467716 CEP350Q5VT06 3117 aa23.34■■□□□ 1.33
C1GALT1-206ENST00000467716 NEFMP07197 916 aa23.33■■□□□ 1.33
C1GALT1-206ENST00000467716 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.33
C1GALT1-206ENST00000467716 NLGN1Q8N2Q7 840 aa23.32■■□□□ 1.32
C1GALT1-206ENST00000467716 RFC4P35249 363 aa23.31■■□□□ 1.32
C1GALT1-206ENST00000467716 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
C1GALT1-206ENST00000467716 PTCD1O75127 700 aaKnown RBP23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 AKAP4Q5JQC9 854 aa23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 RC3H1Q5TC82 1133 aaKnown RBP23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 GAS2L2Q8NHY3 880 aa23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 BCS1LQ9Y276 419 aa23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 KDM6AO15550 1401 aaPredicted RBP23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
C1GALT1-206ENST00000467716 ANP32CO43423 234 aa23.29■■□□□ 1.32
C1GALT1-206ENST00000467716 FCHSD2O94868 740 aa23.29■■□□□ 1.32
C1GALT1-206ENST00000467716 ADRA2BP18089 450 aa23.29■■□□□ 1.32
C1GALT1-206ENST00000467716 PXDNLA1KZ92 1463 aa23.29■■□□□ 1.32
C1GALT1-206ENST00000467716 CNTNAP4Q9C0A0 1308 aa23.29■■□□□ 1.32
C1GALT1-206ENST00000467716 A0A0G2JLW4 131 aa23.28■■□□□ 1.32
C1GALT1-206ENST00000467716 PRKAR2BP31323 418 aa23.28■■□□□ 1.32
C1GALT1-206ENST00000467716 CCDC87Q9NVE4 849 aa23.28■■□□□ 1.32
C1GALT1-206ENST00000467716 RPS6KA4O75676 772 aa23.27■■□□□ 1.32
C1GALT1-206ENST00000467716 GYS1P13807 737 aa23.27■■□□□ 1.32
C1GALT1-206ENST00000467716 TGFB2P61812 414 aa23.27■■□□□ 1.32
C1GALT1-206ENST00000467716 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
C1GALT1-206ENST00000467716 PARP3Q9Y6F1 533 aa23.27■■□□□ 1.32
C1GALT1-206ENST00000467716 C10orf71Q711Q0 1435 aa23.25■■□□□ 1.31
C1GALT1-206ENST00000467716 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
C1GALT1-206ENST00000467716 NFATC2IPQ8NCF5 419 aa23.25■■□□□ 1.31
C1GALT1-206ENST00000467716 HSPA6P17066 643 aa23.24■■□□□ 1.31
C1GALT1-206ENST00000467716 DPEP1P16444 411 aa23.23■■□□□ 1.31
C1GALT1-206ENST00000467716 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
C1GALT1-206ENST00000467716 ARHGAP27Q6ZUM4 889 aa23.23■■□□□ 1.31
C1GALT1-206ENST00000467716 CRKLP46109 303 aaKnown RBP23.22■■□□□ 1.31
C1GALT1-206ENST00000467716 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
C1GALT1-206ENST00000467716 SRP68Q9UHB9 627 aaKnown RBP23.21■■□□□ 1.31
C1GALT1-206ENST00000467716 MAPK8IP3Q9UPT6 1336 aa23.21■■□□□ 1.31
C1GALT1-206ENST00000467716 COL5A3P25940 1745 aaPredicted RBP23.21■■□□□ 1.31
C1GALT1-206ENST00000467716 N4BP2Q86UW6 1770 aaPredicted RBP23.21■■□□□ 1.31
C1GALT1-206ENST00000467716 SCN11AQ9UI33 1791 aa23.2■■□□□ 1.3
C1GALT1-206ENST00000467716 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
C1GALT1-206ENST00000467716 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
C1GALT1-206ENST00000467716 KIF3CO14782 793 aa23.2■■□□□ 1.3
C1GALT1-206ENST00000467716 KIF13BQ9NQT8 1826 aa23.18■■□□□ 1.3
C1GALT1-206ENST00000467716 KIAA1551Q9HCM1 1747 aa23.17■■□□□ 1.3
C1GALT1-206ENST00000467716 USP42Q9H9J4 1324 aaKnown RBP23.17■■□□□ 1.3
C1GALT1-206ENST00000467716 RNMTO43148 476 aaKnown RBP23.17■■□□□ 1.3
C1GALT1-206ENST00000467716 FKBP8Q14318 412 aa23.17■■□□□ 1.3
C1GALT1-206ENST00000467716 RTF1Q92541 710 aaKnown RBP23.17■■□□□ 1.3
C1GALT1-206ENST00000467716 PHACTR3Q96KR7 559 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms