RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 GNPATO15228 680 aa26.71■■□□□ 1.87
FAM53A-204ENST00000467215 ASAP1Q9ULH1 1129 aa26.71■■□□□ 1.87
FAM53A-204ENST00000467215 PHKG2P15735 406 aa26.69■■□□□ 1.86
FAM53A-204ENST00000467215 MYH14Q7Z406 1995 aaKnown RBP26.67■■□□□ 1.86
FAM53A-204ENST00000467215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.67■■□□□ 1.86
FAM53A-204ENST00000467215 ATP6V1AP38606 617 aa26.66■■□□□ 1.86
FAM53A-204ENST00000467215 POLKQ9UBT6 870 aa26.66■■□□□ 1.86
FAM53A-204ENST00000467215 C10orf71Q711Q0 1435 aa26.65■■□□□ 1.86
FAM53A-204ENST00000467215 IFNL2Q8IZJ0 200 aa26.65■■□□□ 1.86
FAM53A-204ENST00000467215 ATG3Q9NT62 314 aa26.64■■□□□ 1.86
FAM53A-204ENST00000467215 TJP1Q07157 1748 aa26.64■■□□□ 1.85
FAM53A-204ENST00000467215 ARFGEF1Q9Y6D6 1849 aa26.63■■□□□ 1.85
FAM53A-204ENST00000467215 MMP10P09238 476 aa26.63■■□□□ 1.85
FAM53A-204ENST00000467215 EIF4A2Q14240 407 aaKnown RBP26.63■■□□□ 1.85
FAM53A-204ENST00000467215 PLEKHG2Q9H7P9 1386 aa26.62■■□□□ 1.85
FAM53A-204ENST00000467215 HSPA6P17066 643 aa26.62■■□□□ 1.85
FAM53A-204ENST00000467215 KDM6AO15550 1401 aaPredicted RBP26.62■■□□□ 1.85
FAM53A-204ENST00000467215 IFFO2Q5TF58 517 aa26.61■■□□□ 1.85
FAM53A-204ENST00000467215 VIRMAQ69YN4 1812 aaKnown RBP26.6■■□□□ 1.85
FAM53A-204ENST00000467215 TNNT2P45379 298 aaPredicted RBP26.6■■□□□ 1.85
FAM53A-204ENST00000467215 SLC4A9Q96Q91 983 aa26.59■■□□□ 1.85
FAM53A-204ENST00000467215 POLR3GLQ9BT43 218 aa26.58■■□□□ 1.85
FAM53A-204ENST00000467215 SCN11AQ9UI33 1791 aa26.58■■□□□ 1.85
FAM53A-204ENST00000467215 KIF3CO14782 793 aa26.57■■□□□ 1.84
FAM53A-204ENST00000467215 RTCBQ9Y3I0 505 aaKnown RBP26.56■■□□□ 1.84
FAM53A-204ENST00000467215 RBM42Q9BTD8 480 aaKnown RBP26.55■■□□□ 1.84
FAM53A-204ENST00000467215 ADAMTS7Q9UKP4 1686 aa26.54■■□□□ 1.84
FAM53A-204ENST00000467215 CNTNAP4Q9C0A0 1308 aa26.54■■□□□ 1.84
FAM53A-204ENST00000467215 BCS1LQ9Y276 419 aa26.53■■□□□ 1.84
FAM53A-204ENST00000467215 WDR90Q96KV7 1748 aa26.52■■□□□ 1.84
FAM53A-204ENST00000467215 A0A0G2JLW4 131 aa26.51■■□□□ 1.83
FAM53A-204ENST00000467215 TRAPPC3LQ5T215 181 aa26.51■■□□□ 1.83
FAM53A-204ENST00000467215 ERVV-2B6SEH9 535 aa26.5■■□□□ 1.83
FAM53A-204ENST00000467215 GYS1P13807 737 aa26.5■■□□□ 1.83
FAM53A-204ENST00000467215 ZNF530Q6P9A1 599 aaPredicted RBP26.5■■□□□ 1.83
FAM53A-204ENST00000467215 ARHGEF1Q92888 912 aaKnown RBP26.5■■□□□ 1.83
FAM53A-204ENST00000467215 DCAF5Q96JK2 942 aa26.5■■□□□ 1.83
FAM53A-204ENST00000467215 ADRA2BP18089 450 aa26.49■■□□□ 1.83
FAM53A-204ENST00000467215 TGFB2P61812 414 aa26.49■■□□□ 1.83
FAM53A-204ENST00000467215 NLGN1Q8N2Q7 840 aa26.49■■□□□ 1.83
FAM53A-204ENST00000467215 CCDC87Q9NVE4 849 aa26.48■■□□□ 1.83
FAM53A-204ENST00000467215 HSP90AB1P08238 724 aaKnown RBP26.47■■□□□ 1.83
FAM53A-204ENST00000467215 DPEP1P16444 411 aa26.47■■□□□ 1.83
FAM53A-204ENST00000467215 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
FAM53A-204ENST00000467215 RC3H1Q5TC82 1133 aaKnown RBP26.47■■□□□ 1.83
FAM53A-204ENST00000467215 RPS6KA4O75676 772 aa26.46■■□□□ 1.83
FAM53A-204ENST00000467215 AEBP1Q8IUX7 1158 aa26.46■■□□□ 1.83
FAM53A-204ENST00000467215 SBF1O95248 1867 aa26.46■■□□□ 1.83
FAM53A-204ENST00000467215 AFDNP55196 1824 aaKnown RBP26.46■■□□□ 1.83
FAM53A-204ENST00000467215 RFC4P35249 363 aa26.45■■□□□ 1.82
FAM53A-204ENST00000467215 CABP4P57796 275 aa26.45■■□□□ 1.82
FAM53A-204ENST00000467215 PLEKHO1Q53GL0 409 aaPredicted RBP26.45■■□□□ 1.82
FAM53A-204ENST00000467215 TNRC6CQ9HCJ0 1690 aaKnown RBP26.44■■□□□ 1.82
FAM53A-204ENST00000467215 FCHSD2O94868 740 aa26.44■■□□□ 1.82
FAM53A-204ENST00000467215 DLEC1Q9Y238 1755 aa26.43■■□□□ 1.82
FAM53A-204ENST00000467215 PTCD1O75127 700 aaKnown RBP26.43■■□□□ 1.82
FAM53A-204ENST00000467215 ARHGAP27Q6ZUM4 889 aa26.43■■□□□ 1.82
FAM53A-204ENST00000467215 PARP3Q9Y6F1 533 aa26.43■■□□□ 1.82
FAM53A-204ENST00000467215 NMRK2Q9NPI5 230 aa26.42■■□□□ 1.82
FAM53A-204ENST00000467215 SRP68Q9UHB9 627 aaKnown RBP26.42■■□□□ 1.82
FAM53A-204ENST00000467215 CRKLP46109 303 aaKnown RBP26.41■■□□□ 1.82
FAM53A-204ENST00000467215 TIMELESSQ9UNS1 1208 aa26.41■■□□□ 1.82
FAM53A-204ENST00000467215 MRC1P22897 1456 aa26.41■■□□□ 1.82
FAM53A-204ENST00000467215 USP42Q9H9J4 1324 aaKnown RBP26.4■■□□□ 1.82
FAM53A-204ENST00000467215 AMOTQ4VCS5 1084 aa26.4■■□□□ 1.82
FAM53A-204ENST00000467215 KCNA3P22001 575 aa26.39■■□□□ 1.82
FAM53A-204ENST00000467215 MTHFSP49914 203 aa26.39■■□□□ 1.82
FAM53A-204ENST00000467215 DDR1Q08345 913 aa26.39■■□□□ 1.82
FAM53A-204ENST00000467215 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
FAM53A-204ENST00000467215 PANK3Q9H999 370 aa26.39■■□□□ 1.82
FAM53A-204ENST00000467215 NRXN2Q9P2S2 1712 aa26.39■■□□□ 1.81
FAM53A-204ENST00000467215 KCPQ6ZWJ8 1503 aa26.39■■□□□ 1.81
FAM53A-204ENST00000467215 TOMM70O94826 608 aa26.38■■□□□ 1.81
FAM53A-204ENST00000467215 TIAM2Q8IVF5 1701 aa26.38■■□□□ 1.81
FAM53A-204ENST00000467215 APLP1P51693 650 aa26.37■■□□□ 1.81
FAM53A-204ENST00000467215 FKBP8Q14318 412 aa26.37■■□□□ 1.81
FAM53A-204ENST00000467215 UBR2Q8IWV8 1755 aa26.37■■□□□ 1.81
FAM53A-204ENST00000467215 HSPA5P11021 654 aaKnown RBP26.36■■□□□ 1.81
FAM53A-204ENST00000467215 C9orf131Q5VYM1 1079 aa26.36■■□□□ 1.81
FAM53A-204ENST00000467215 NFATC2IPQ8NCF5 419 aa26.35■■□□□ 1.81
FAM53A-204ENST00000467215 SULT6B1Q6IMI4 303 aa26.34■■□□□ 1.81
FAM53A-204ENST00000467215 MORC1Q86VD1 984 aa26.34■■□□□ 1.81
FAM53A-204ENST00000467215 CCDC88AQ3V6T2 1871 aa26.34■■□□□ 1.81
FAM53A-204ENST00000467215 EIF4G2P78344 907 aaKnown RBP eCLIP26.33■■□□□ 1.81
FAM53A-204ENST00000467215 CLSPNQ9HAW4 1339 aa26.33■■□□□ 1.81
FAM53A-204ENST00000467215 CHRNA5P30532 468 aa26.32■■□□□ 1.8
FAM53A-204ENST00000467215 PIM2Q9P1W9 311 aa26.32■■□□□ 1.8
FAM53A-204ENST00000467215 INTS5Q6P9B9 1019 aaKnown RBP26.3■■□□□ 1.8
FAM53A-204ENST00000467215 SCN7AQ01118 1682 aa26.29■■□□□ 1.8
FAM53A-204ENST00000467215 POLRMTO00411 1230 aaKnown RBP26.29■■□□□ 1.8
FAM53A-204ENST00000467215 DALRD3Q5D0E6 543 aaKnown RBP26.29■■□□□ 1.8
FAM53A-204ENST00000467215 DNAJC10Q8IXB1 793 aa26.29■■□□□ 1.8
FAM53A-204ENST00000467215 RNF181Q9P0P0 153 aa26.29■■□□□ 1.8
FAM53A-204ENST00000467215 IL13P35225 146 aa26.28■■□□□ 1.8
FAM53A-204ENST00000467215 DNAJC5GQ8N7S2 189 aa26.28■■□□□ 1.8
FAM53A-204ENST00000467215 RBM46Q8TBY0 533 aaKnown RBP26.28■■□□□ 1.8
FAM53A-204ENST00000467215 SOS1Q07889 1333 aaPredicted RBP26.28■■□□□ 1.8
FAM53A-204ENST00000467215 ANKRD31Q8N7Z5 1873 aa26.28■■□□□ 1.8
FAM53A-204ENST00000467215 COL15A1P39059 1388 aa26.27■■□□□ 1.8
FAM53A-204ENST00000467215 COL11A2P13942 1736 aaPredicted RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms