RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ZSCAN10Q96SZ4 725 aaPredicted RBP7.13□□□□□ -1.27
GTF3C3-209ENST00000466862 ALG2Q9H553 416 aa7.13□□□□□ -1.27
GTF3C3-209ENST00000466862 TIMMDC1Q9NPL8 285 aa7.13□□□□□ -1.27
GTF3C3-209ENST00000466862 A0A1B0GTH6 734 aa7.12□□□□□ -1.27
GTF3C3-209ENST00000466862 F11P03951 625 aa7.12□□□□□ -1.27
GTF3C3-209ENST00000466862 MAP7D1Q3KQU3 841 aa7.12□□□□□ -1.27
GTF3C3-209ENST00000466862 ESCO1Q5FWF5 840 aa7.12□□□□□ -1.27
GTF3C3-209ENST00000466862 RIPOR1Q6ZS17 1223 aa7.12□□□□□ -1.27
GTF3C3-209ENST00000466862 GTPBP3Q969Y2 492 aaKnown RBP7.12□□□□□ -1.27
GTF3C3-209ENST00000466862 GAS2L1Q99501 681 aaPredicted RBP7.12□□□□□ -1.27
GTF3C3-209ENST00000466862 IGF1RP08069 1367 aa7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 H7C1W4 665 aa7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 GDF10P55107 478 aa7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 TLR1Q15399 786 aa7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 PPARGC1BQ86YN6 1023 aaKnown RBP7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 ADAMTS19Q8TE59 1207 aa7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 RHBDD1Q8TEB9 315 aa7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 NUCKS1Q9H1E3 243 aaKnown RBP7.11□□□□□ -1.27
GTF3C3-209ENST00000466862 TMEM229AB2RXF0 380 aa7.1□□□□□ -1.27
GTF3C3-209ENST00000466862 INHAP05111 366 aa7.1□□□□□ -1.27
GTF3C3-209ENST00000466862 CELA2BP08218 269 aaPredicted RBP7.1□□□□□ -1.27
GTF3C3-209ENST00000466862 PHKA2P46019 1235 aa7.1□□□□□ -1.27
GTF3C3-209ENST00000466862 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
GTF3C3-209ENST00000466862 ATP4AP20648 1035 aa7.09□□□□□ -1.27
GTF3C3-209ENST00000466862 SEMA3FQ13275 785 aa7.09□□□□□ -1.27
GTF3C3-209ENST00000466862 SIRT1Q96EB6 747 aa7.09□□□□□ -1.27
GTF3C3-209ENST00000466862 GPAMQ9HCL2 828 aa7.09□□□□□ -1.27
GTF3C3-209ENST00000466862 IQSEC3Q9UPP2 1182 aaPredicted RBP7.09□□□□□ -1.27
GTF3C3-209ENST00000466862 PCDHGA11Q9Y5H2 935 aa7.09□□□□□ -1.27
GTF3C3-209ENST00000466862 POM121CA8CG34 1229 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 IRS1P35568 1242 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 LBRQ14739 615 aaKnown RBP7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 MTFR1Q15390 333 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 GNASQ5JWF2 1037 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 TMEM214Q6NUQ4 689 aaKnown RBP7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 NFATC2IPQ8NCF5 419 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 ACDQ96AP0 544 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 CRISPLD1Q9H336 500 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 NDFIP2Q9NV92 336 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 DNAAF2Q9NVR5 837 aaKnown RBP7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 USP3Q9Y6I4 520 aa7.08□□□□□ -1.28
GTF3C3-209ENST00000466862 RNF225M0QZC1 329 aaPredicted RBP7.07□□□□□ -1.28
GTF3C3-209ENST00000466862 MSX1P28360 303 aa7.07□□□□□ -1.28
GTF3C3-209ENST00000466862 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
GTF3C3-209ENST00000466862 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
GTF3C3-209ENST00000466862 UCN2Q96RP3 112 aa7.07□□□□□ -1.28
GTF3C3-209ENST00000466862 PLA2G4AP47712 749 aa7.06□□□□□ -1.28
GTF3C3-209ENST00000466862 FOXR1Q6PIV2 292 aa7.06□□□□□ -1.28
GTF3C3-209ENST00000466862 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
GTF3C3-209ENST00000466862 CFHR5Q9BXR6 569 aa7.06□□□□□ -1.28
GTF3C3-209ENST00000466862 RUBCNLQ9H714 662 aa7.06□□□□□ -1.28
GTF3C3-209ENST00000466862 USP17L5A8MUK1 530 aa7.05□□□□□ -1.28
GTF3C3-209ENST00000466862 SMTNP53814 917 aa7.05□□□□□ -1.28
GTF3C3-209ENST00000466862 EPHA4P54764 986 aa7.05□□□□□ -1.28
GTF3C3-209ENST00000466862 FLIIQ13045 1269 aa7.05□□□□□ -1.28
GTF3C3-209ENST00000466862 NCOA4Q13772 614 aa7.05□□□□□ -1.28
GTF3C3-209ENST00000466862 HCN2Q9UL51 889 aa7.05□□□□□ -1.28
GTF3C3-209ENST00000466862 SKIP12755 728 aa7.04□□□□□ -1.28
GTF3C3-209ENST00000466862 MX2P20592 715 aa7.04□□□□□ -1.28
GTF3C3-209ENST00000466862 EML3Q32P44 896 aa7.04□□□□□ -1.28
GTF3C3-209ENST00000466862 LRRC4BQ9NT99 713 aa7.04□□□□□ -1.28
GTF3C3-209ENST00000466862 BCRP11274 1271 aa7.03□□□□□ -1.28
GTF3C3-209ENST00000466862 UBTFP17480 764 aaKnown RBP7.03□□□□□ -1.28
GTF3C3-209ENST00000466862 GTF2IP78347 998 aa7.03□□□□□ -1.28
GTF3C3-209ENST00000466862 MAP3K10Q02779 954 aa7.03□□□□□ -1.28
GTF3C3-209ENST00000466862 PLEKHM2Q8IWE5 1019 aa7.03□□□□□ -1.28
GTF3C3-209ENST00000466862 ATXN7L1Q9ULK2 861 aaPredicted RBP7.03□□□□□ -1.28
GTF3C3-209ENST00000466862 A6NJY4 79 aa7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 LZTS3O60299 673 aaPredicted RBP7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 GTF2E1P29083 439 aaPredicted RBP7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 FOXK2Q01167 660 aa7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 TBC1D9Q6ZT07 1266 aa7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 FNBP4Q8N3X1 1017 aaPredicted RBP7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 C1orf216Q8TAB5 229 aa7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 ZNF358Q9NW07 568 aa7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 SERTAD1Q9UHV2 236 aa7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 KIAA1024Q9UPX6 916 aa7.02□□□□□ -1.29
GTF3C3-209ENST00000466862 CDK2AP1O14519 115 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 C2CD2LO14523 706 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 OIP5O43482 229 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 BNIP3LO60238 219 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 MAP2K3P46734 347 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 C1orf229Q6ZS94 237 aaPredicted RBP7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 ZDHHC1Q8WTX9 485 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 ABHD17AQ96GS6 310 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 OXCT2Q9BYC2 517 aaPredicted RBP7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 NIFKQ9BYG3 293 aaKnown RBP7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
GTF3C3-209ENST00000466862 USP17L3A6NCW0 530 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 USP17L4A6NCW7 530 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 SHISA8B8ZZ34 492 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 RAD21O60216 631 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 CSB-PGBD3P0DP91 1061 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 EFHC2Q5JST6 749 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 USP17L2Q6R6M4 530 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 USP17L1Q7RTZ2 530 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 WWC1Q8IX03 1113 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 DEPDC4Q8N2C3 294 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 PGBD3Q8N328 593 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 KLRG1Q96E93 195 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms