RNA–Protein interactions for RNA: ENST00000466559.1

REPIN1-204, Transcript of replication initiator 1, humanhuman

TSL 1 (best) BASIC

Gene REPIN1, Length 1,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-204ENST00000466559 CNGB1Q14028 1251 aaPredicted RBP35.25■■■■□ 3.23
REPIN1-204ENST00000466559 ATG3Q9NT62 314 aa35.25■■■■□ 3.23
REPIN1-204ENST00000466559 DIAPH1O60610 1272 aaKnown RBP35.22■■■■□ 3.23
REPIN1-204ENST00000466559 MSL1Q68DK7 614 aa35.21■■■■□ 3.23
REPIN1-204ENST00000466559 KDM6AO15550 1401 aaPredicted RBP35.21■■■■□ 3.23
REPIN1-204ENST00000466559 PHF14O94880 888 aa35.2■■■■□ 3.23
REPIN1-204ENST00000466559 LINC00116Q8NCU8 138 aa35.2■■■■□ 3.23
REPIN1-204ENST00000466559 UBR3Q6ZT12 1888 aa35.18■■■■□ 3.22
REPIN1-204ENST00000466559 ITPK1Q13572 414 aa35.18■■■■□ 3.22
REPIN1-204ENST00000466559 RBM42Q9BTD8 480 aaKnown RBP35.18■■■■□ 3.22
REPIN1-204ENST00000466559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.17■■■■□ 3.22
REPIN1-204ENST00000466559 HMOX1P09601 288 aa35.17■■■■□ 3.22
REPIN1-204ENST00000466559 SSFA2P28290 1259 aa35.17■■■■□ 3.22
REPIN1-204ENST00000466559 GNPATO15228 680 aa35.15■■■■□ 3.22
REPIN1-204ENST00000466559 AKAP4Q5JQC9 854 aa35.15■■■■□ 3.22
REPIN1-204ENST00000466559 GPR162Q16538 588 aa35.11■■■■□ 3.21
REPIN1-204ENST00000466559 AMIGO3Q86WK7 504 aa35.11■■■■□ 3.21
REPIN1-204ENST00000466559 NFATC2IPQ8NCF5 419 aa35.11■■■■□ 3.21
REPIN1-204ENST00000466559 ZNF831Q5JPB2 1677 aa35.11■■■■□ 3.21
REPIN1-204ENST00000466559 SCN11AQ9UI33 1791 aa35.1■■■■□ 3.21
REPIN1-204ENST00000466559 U2SURPO15042 1029 aaKnown RBP35.08■■■■□ 3.21
REPIN1-204ENST00000466559 SMIM5Q71RC9 77 aa35.08■■■■□ 3.21
REPIN1-204ENST00000466559 PELP1Q8IZL8 1130 aaKnown RBP35.07■■■■□ 3.2
REPIN1-204ENST00000466559 RTCBQ9Y3I0 505 aaKnown RBP35.07■■■■□ 3.2
REPIN1-204ENST00000466559 PTCD1O75127 700 aaKnown RBP35.06■■■■□ 3.2
REPIN1-204ENST00000466559 NLGN2Q8NFZ4 835 aa35.06■■■■□ 3.2
REPIN1-204ENST00000466559 CFAP53Q96M91 514 aa35.06■■■■□ 3.2
REPIN1-204ENST00000466559 SLC4A9Q96Q91 983 aa35.06■■■■□ 3.2
REPIN1-204ENST00000466559 COL3A1P02461 1466 aaPredicted RBP35.04■■■■□ 3.2
REPIN1-204ENST00000466559 RC3H1Q5TC82 1133 aaKnown RBP35.04■■■■□ 3.2
REPIN1-204ENST00000466559 SLC52A2Q9HAB3 445 aa35.03■■■■□ 3.2
REPIN1-204ENST00000466559 CNTNAP4Q9C0A0 1308 aa35.03■■■■□ 3.2
REPIN1-204ENST00000466559 CHD4Q14839 1912 aa35.02■■■■□ 3.2
REPIN1-204ENST00000466559 MTHFSDQ2M296 383 aaKnown RBP35.02■■■■□ 3.2
REPIN1-204ENST00000466559 TRAPPC3LQ5T215 181 aa35.02■■■■□ 3.2
REPIN1-204ENST00000466559 CD2APQ9Y5K6 639 aa35.02■■■■□ 3.2
REPIN1-204ENST00000466559 RNMTO43148 476 aaKnown RBP35.01■■■■□ 3.2
REPIN1-204ENST00000466559 COL5A3P25940 1745 aaPredicted RBP35.01■■■■□ 3.19
REPIN1-204ENST00000466559 ADRA2BP18089 450 aa35■■■■□ 3.19
REPIN1-204ENST00000466559 LGR6Q9HBX8 967 aa35■■■■□ 3.19
REPIN1-204ENST00000466559 VIRMAQ69YN4 1812 aaKnown RBP34.97■■■■□ 3.19
REPIN1-204ENST00000466559 RPS6KA4O75676 772 aa34.96■■■■□ 3.19
REPIN1-204ENST00000466559 NUDCQ9Y266 331 aa34.96■■■■□ 3.19
REPIN1-204ENST00000466559 GAS2L2Q8NHY3 880 aa34.95■■■■□ 3.19
REPIN1-204ENST00000466559 MRC1P22897 1456 aa34.95■■■■□ 3.19
REPIN1-204ENST00000466559 RFC4P35249 363 aa34.94■■■■□ 3.18
REPIN1-204ENST00000466559 CRKLP46109 303 aaKnown RBP34.93■■■■□ 3.18
REPIN1-204ENST00000466559 ARHGEF1Q92888 912 aaKnown RBP34.93■■■■□ 3.18
REPIN1-204ENST00000466559 NLGN1Q8N2Q7 840 aa34.92■■■■□ 3.18
REPIN1-204ENST00000466559 MYH14Q7Z406 1995 aaKnown RBP34.92■■■■□ 3.18
REPIN1-204ENST00000466559 GRIN3BO60391 1043 aa34.91■■■■□ 3.18
REPIN1-204ENST00000466559 PPP2R1AP30153 589 aa34.91■■■■□ 3.18
REPIN1-204ENST00000466559 MMP10P09238 476 aa34.9■■■■□ 3.18
REPIN1-204ENST00000466559 ADAMTS7Q9UKP4 1686 aa34.89■■■■□ 3.18
REPIN1-204ENST00000466559 CICQ96RK0 1608 aaPredicted RBP34.89■■■■□ 3.18
REPIN1-204ENST00000466559 GNAT3A8MTJ3 354 aa34.89■■■■□ 3.18
REPIN1-204ENST00000466559 TJP1Q07157 1748 aa34.89■■■■□ 3.18
REPIN1-204ENST00000466559 UTRNP46939 3433 aa34.88■■■■□ 3.18
REPIN1-204ENST00000466559 SLC39A6Q13433 755 aa34.88■■■■□ 3.17
REPIN1-204ENST00000466559 PRKAR2BP31323 418 aa34.86■■■■□ 3.17
REPIN1-204ENST00000466559 TEFQ10587 303 aa34.86■■■■□ 3.17
REPIN1-204ENST00000466559 YBX3P16989 372 aaKnown RBP eCLIP34.85■■■■□ 3.171e-11■□□□□ 10.7
REPIN1-204ENST00000466559 DNAJC10Q8IXB1 793 aa34.85■■■■□ 3.17
REPIN1-204ENST00000466559 TTC5Q8N0Z6 440 aa34.85■■■■□ 3.17
REPIN1-204ENST00000466559 U2AF1L5P0DN76 240 aaPredicted RBP34.84■■■■□ 3.17
REPIN1-204ENST00000466559 U2AF1Q01081 240 aaKnown RBP eCLIP34.84■■■■□ 3.171e-8■■■□□ 16.3
REPIN1-204ENST00000466559 GYS1P13807 737 aa34.83■■■■□ 3.17
REPIN1-204ENST00000466559 ZNF784Q8NCA9 323 aaPredicted RBP34.83■■■■□ 3.17
REPIN1-204ENST00000466559 RSPH6AQ9H0K4 717 aa34.83■■■■□ 3.17
REPIN1-204ENST00000466559 C4AP0C0L4 1744 aa34.82■■■■□ 3.16
REPIN1-204ENST00000466559 CCDC87Q9NVE4 849 aa34.82■■■■□ 3.16
REPIN1-204ENST00000466559 GOLGB1Q14789 3259 aaKnown RBP34.8■■■■□ 3.16
REPIN1-204ENST00000466559 INTS5Q6P9B9 1019 aaKnown RBP34.8■■■■□ 3.16
REPIN1-204ENST00000466559 VSIG10Q8N0Z9 540 aa34.8■■■■□ 3.16
REPIN1-204ENST00000466559 KCPQ6ZWJ8 1503 aa34.8■■■■□ 3.16
REPIN1-204ENST00000466559 PARP3Q9Y6F1 533 aa34.79■■■■□ 3.16
REPIN1-204ENST00000466559 IL17REQ8NFR9 667 aa34.78■■■■□ 3.16
REPIN1-204ENST00000466559 PHACTR3Q96KR7 559 aa34.78■■■■□ 3.16
REPIN1-204ENST00000466559 CYP19A1P11511 503 aaPredicted RBP34.77■■■■□ 3.16
REPIN1-204ENST00000466559 FCHSD2O94868 740 aa34.76■■■■□ 3.16
REPIN1-204ENST00000466559 USP42Q9H9J4 1324 aaKnown RBP34.76■■■■□ 3.15
REPIN1-204ENST00000466559 SRP68Q9UHB9 627 aaKnown RBP34.75■■■■□ 3.15
REPIN1-204ENST00000466559 UBR2Q8IWV8 1755 aa34.74■■■■□ 3.15
REPIN1-204ENST00000466559 ZPR1O75312 459 aa34.74■■■■□ 3.15
REPIN1-204ENST00000466559 SOS1Q07889 1333 aaPredicted RBP34.73■■■■□ 3.15
REPIN1-204ENST00000466559 STARD3NLO95772 234 aa34.72■■■■□ 3.15
REPIN1-204ENST00000466559 ZNF790Q6PG37 636 aa34.72■■■■□ 3.15
REPIN1-204ENST00000466559 RTF1Q92541 710 aaKnown RBP34.72■■■■□ 3.15
REPIN1-204ENST00000466559 WWC3Q9ULE0 1092 aa34.72■■■■□ 3.15
REPIN1-204ENST00000466559 TGFB2P61812 414 aa34.71■■■■□ 3.15
REPIN1-204ENST00000466559 KIF13BQ9NQT8 1826 aa34.71■■■■□ 3.15
REPIN1-204ENST00000466559 FKBP8Q14318 412 aa34.7■■■■□ 3.15
REPIN1-204ENST00000466559 ZBTB1Q9Y2K1 713 aa34.7■■■■□ 3.15
REPIN1-204ENST00000466559 CEMIPQ8WUJ3 1361 aa34.7■■■■□ 3.15
REPIN1-204ENST00000466559 C10orf71Q711Q0 1435 aa34.7■■■■□ 3.15
REPIN1-204ENST00000466559 SIPA1L3O60292 1781 aaPredicted RBP34.69■■■■□ 3.14
REPIN1-204ENST00000466559 NEFMP07197 916 aa34.69■■■■□ 3.14
REPIN1-204ENST00000466559 TEX13AQ9BXU3 409 aaPredicted RBP34.69■■■■□ 3.14
REPIN1-204ENST00000466559 COL15A1P39059 1388 aa34.68■■■■□ 3.14
REPIN1-204ENST00000466559 ZNF496Q96IT1 587 aaPredicted RBP34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms