RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
ATG9A-219ENST00000466217 ATG3Q9NT62 314 aa19.05■□□□□ 0.64
ATG9A-219ENST00000466217 KIF13BQ9NQT8 1826 aa19.04■□□□□ 0.64
ATG9A-219ENST00000466217 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
ATG9A-219ENST00000466217 KDRP35968 1356 aa19.04■□□□□ 0.64
ATG9A-219ENST00000466217 MMP10P09238 476 aa19.03■□□□□ 0.64
ATG9A-219ENST00000466217 TGFB2P61812 414 aa19.03■□□□□ 0.64
ATG9A-219ENST00000466217 ZNF526Q8TF50 670 aaPredicted RBP19.03■□□□□ 0.64
ATG9A-219ENST00000466217 ERVV-2B6SEH9 535 aa19.02■□□□□ 0.64
ATG9A-219ENST00000466217 RTCBQ9Y3I0 505 aaKnown RBP19.02■□□□□ 0.64
ATG9A-219ENST00000466217 PXDNLA1KZ92 1463 aa19.02■□□□□ 0.63
ATG9A-219ENST00000466217 KIF3CO14782 793 aa19.01■□□□□ 0.63
ATG9A-219ENST00000466217 HSP90AB1P08238 724 aaKnown RBP19.01■□□□□ 0.63
ATG9A-219ENST00000466217 ADRA2BP18089 450 aa19.01■□□□□ 0.63
ATG9A-219ENST00000466217 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
ATG9A-219ENST00000466217 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
ATG9A-219ENST00000466217 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
ATG9A-219ENST00000466217 NLGN1Q8N2Q7 840 aa19.01■□□□□ 0.63
ATG9A-219ENST00000466217 TIMELESSQ9UNS1 1208 aa19.01■□□□□ 0.63
ATG9A-219ENST00000466217 WWC3Q9ULE0 1092 aa19■□□□□ 0.63
ATG9A-219ENST00000466217 KIAA1551Q9HCM1 1747 aa19■□□□□ 0.63
ATG9A-219ENST00000466217 C10orf71Q711Q0 1435 aa19■□□□□ 0.63
ATG9A-219ENST00000466217 DCAF5Q96JK2 942 aa18.99■□□□□ 0.63
ATG9A-219ENST00000466217 CNTNAP4Q9C0A0 1308 aa18.99■□□□□ 0.63
ATG9A-219ENST00000466217 SLC4A9Q96Q91 983 aa18.98■□□□□ 0.63
ATG9A-219ENST00000466217 COL5A3P25940 1745 aaPredicted RBP18.97■□□□□ 0.63
ATG9A-219ENST00000466217 ARHGEF1Q92888 912 aaKnown RBP18.96■□□□□ 0.63
ATG9A-219ENST00000466217 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
ATG9A-219ENST00000466217 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
ATG9A-219ENST00000466217 GYS1P13807 737 aa18.95■□□□□ 0.62
ATG9A-219ENST00000466217 AMOTQ4VCS5 1084 aa18.95■□□□□ 0.62
ATG9A-219ENST00000466217 PLEKHO1Q53GL0 409 aaPredicted RBP18.95■□□□□ 0.62
ATG9A-219ENST00000466217 RBM42Q9BTD8 480 aaKnown RBP18.95■□□□□ 0.62
ATG9A-219ENST00000466217 C4AP0C0L4 1744 aa18.94■□□□□ 0.62
ATG9A-219ENST00000466217 N4BP2Q86UW6 1770 aaPredicted RBP18.94■□□□□ 0.62
ATG9A-219ENST00000466217 KDM6AO15550 1401 aaPredicted RBP18.94■□□□□ 0.62
ATG9A-219ENST00000466217 BCS1LQ9Y276 419 aa18.94■□□□□ 0.62
ATG9A-219ENST00000466217 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
ATG9A-219ENST00000466217 RFC4P35249 363 aa18.93■□□□□ 0.62
ATG9A-219ENST00000466217 APLP1P51693 650 aa18.93■□□□□ 0.62
ATG9A-219ENST00000466217 PARP3Q9Y6F1 533 aa18.93■□□□□ 0.62
ATG9A-219ENST00000466217 TOMM70O94826 608 aa18.92■□□□□ 0.62
ATG9A-219ENST00000466217 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
ATG9A-219ENST00000466217 BRCA1P38398 1863 aaKnown RBP18.91■□□□□ 0.62
ATG9A-219ENST00000466217 DPEP1P16444 411 aa18.91■□□□□ 0.62
ATG9A-219ENST00000466217 CABP4P57796 275 aa18.91■□□□□ 0.62
ATG9A-219ENST00000466217 ZNF530Q6P9A1 599 aaPredicted RBP18.91■□□□□ 0.62
ATG9A-219ENST00000466217 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
ATG9A-219ENST00000466217 FCHSD2O94868 740 aa18.9■□□□□ 0.62
ATG9A-219ENST00000466217 ARHGAP27Q6ZUM4 889 aa18.9■□□□□ 0.62
ATG9A-219ENST00000466217 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
ATG9A-219ENST00000466217 KCNA3P22001 575 aa18.89■□□□□ 0.61
ATG9A-219ENST00000466217 ARFGEF1Q9Y6D6 1849 aa18.88■□□□□ 0.61
ATG9A-219ENST00000466217 MTHFSP49914 203 aa18.88■□□□□ 0.61
ATG9A-219ENST00000466217 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
ATG9A-219ENST00000466217 CRKLP46109 303 aaKnown RBP18.87■□□□□ 0.61
ATG9A-219ENST00000466217 POLR3GLQ9BT43 218 aa18.87■□□□□ 0.61
ATG9A-219ENST00000466217 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
ATG9A-219ENST00000466217 PTCD1O75127 700 aaKnown RBP18.86■□□□□ 0.61
ATG9A-219ENST00000466217 PANK3Q9H999 370 aa18.86■□□□□ 0.61
ATG9A-219ENST00000466217 PIM2Q9P1W9 311 aa18.86■□□□□ 0.61
ATG9A-219ENST00000466217 DNAJC5GQ8N7S2 189 aa18.85■□□□□ 0.61
ATG9A-219ENST00000466217 NFATC2IPQ8NCF5 419 aa18.85■□□□□ 0.61
ATG9A-219ENST00000466217 RBM46Q8TBY0 533 aaKnown RBP18.85■□□□□ 0.61
ATG9A-219ENST00000466217 NMRK2Q9NPI5 230 aa18.85■□□□□ 0.61
ATG9A-219ENST00000466217 C9orf131Q5VYM1 1079 aa18.84■□□□□ 0.61
ATG9A-219ENST00000466217 AEBP1Q8IUX7 1158 aa18.84■□□□□ 0.61
ATG9A-219ENST00000466217 TJP1Q07157 1748 aa18.83■□□□□ 0.61
ATG9A-219ENST00000466217 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
ATG9A-219ENST00000466217 FKBP8Q14318 412 aa18.83■□□□□ 0.6
ATG9A-219ENST00000466217 DALRD3Q5D0E6 543 aaKnown RBP18.83■□□□□ 0.6
ATG9A-219ENST00000466217 SRP68Q9UHB9 627 aaKnown RBP18.83■□□□□ 0.6
ATG9A-219ENST00000466217 DDR1Q08345 913 aa18.82■□□□□ 0.6
ATG9A-219ENST00000466217 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
ATG9A-219ENST00000466217 MORC1Q86VD1 984 aa18.82■□□□□ 0.6
ATG9A-219ENST00000466217 INTS5Q6P9B9 1019 aaKnown RBP18.81■□□□□ 0.6
ATG9A-219ENST00000466217 CCER1Q8TC90 406 aaPredicted RBP18.81■□□□□ 0.6
ATG9A-219ENST00000466217 ADAMTS7Q9UKP4 1686 aa18.81■□□□□ 0.6
ATG9A-219ENST00000466217 SCN11AQ9UI33 1791 aa18.81■□□□□ 0.6
ATG9A-219ENST00000466217 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
ATG9A-219ENST00000466217 POLRMTO00411 1230 aaKnown RBP18.8■□□□□ 0.6
ATG9A-219ENST00000466217 TM4SF1P30408 202 aa18.8■□□□□ 0.6
ATG9A-219ENST00000466217 IL13P35225 146 aa18.8■□□□□ 0.6
ATG9A-219ENST00000466217 FSTL1Q12841 308 aa18.8■□□□□ 0.6
ATG9A-219ENST00000466217 C16orf71Q8IYS4 520 aaPredicted RBP18.8■□□□□ 0.6
ATG9A-219ENST00000466217 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
ATG9A-219ENST00000466217 AKAP4Q5JQC9 854 aa18.79■□□□□ 0.6
ATG9A-219ENST00000466217 WDR90Q96KV7 1748 aa18.78■□□□□ 0.6
ATG9A-219ENST00000466217 SLC52A2Q9HAB3 445 aa18.78■□□□□ 0.6
ATG9A-219ENST00000466217 RNF181Q9P0P0 153 aa18.78■□□□□ 0.6
ATG9A-219ENST00000466217 MRC1P22897 1456 aa18.77■□□□□ 0.6
ATG9A-219ENST00000466217 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.6
ATG9A-219ENST00000466217 ZC3H4Q9UPT8 1303 aaKnown RBP18.77■□□□□ 0.6
ATG9A-219ENST00000466217 ZPR1O75312 459 aa18.77■□□□□ 0.6
ATG9A-219ENST00000466217 KCPQ6ZWJ8 1503 aa18.77■□□□□ 0.6
ATG9A-219ENST00000466217 CHRNA5P30532 468 aa18.76■□□□□ 0.59
ATG9A-219ENST00000466217 DNAJC10Q8IXB1 793 aa18.76■□□□□ 0.59
ATG9A-219ENST00000466217 KNSTRNQ9Y448 316 aa18.76■□□□□ 0.59
ATG9A-219ENST00000466217 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
ATG9A-219ENST00000466217 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms