RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 TEFQ10587 303 aa23.04■■□□□ 1.28
COL9A3-205ENST00000466192 SMC5Q8IY18 1101 aa23.04■■□□□ 1.28
COL9A3-205ENST00000466192 OVOS2A0A0G2JMS6 1433 aa23.04■■□□□ 1.28
COL9A3-205ENST00000466192 CSB-PGBD3P0DP91 1061 aa23.04■■□□□ 1.28
COL9A3-205ENST00000466192 CCDC30Q5VVM6 783 aa23.04■■□□□ 1.28
COL9A3-205ENST00000466192 STK31Q9BXU1 1019 aa23.04■■□□□ 1.28
COL9A3-205ENST00000466192 RAPGEF4Q8WZA2 1011 aa23.03■■□□□ 1.28
COL9A3-205ENST00000466192 MEGF6O75095 1541 aa23.03■■□□□ 1.28
COL9A3-205ENST00000466192 NECTIN2Q92692 538 aa23.03■■□□□ 1.28
COL9A3-205ENST00000466192 ZBTB47Q9UFB7 747 aaPredicted RBP23.03■■□□□ 1.28
COL9A3-205ENST00000466192 EIF4A1P60842 406 aaKnown RBP23.02■■□□□ 1.28
COL9A3-205ENST00000466192 SCN11AQ9UI33 1791 aa23.02■■□□□ 1.28
COL9A3-205ENST00000466192 KCNQ3O43525 872 aa23.01■■□□□ 1.27
COL9A3-205ENST00000466192 BTBD11A6QL63 1104 aa23.01■■□□□ 1.27
COL9A3-205ENST00000466192 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
COL9A3-205ENST00000466192 SIRT2Q8IXJ6 389 aa23■■□□□ 1.27
COL9A3-205ENST00000466192 PKD1L3Q7Z443 1732 aa22.99■■□□□ 1.27
COL9A3-205ENST00000466192 F6X3S4 739 aa22.99■■□□□ 1.27
COL9A3-205ENST00000466192 FLIIQ13045 1269 aa22.98■■□□□ 1.27
COL9A3-205ENST00000466192 HDGFL1Q5TGJ6 251 aa22.98■■□□□ 1.27
COL9A3-205ENST00000466192 PRDM11Q9NQV5 511 aa22.98■■□□□ 1.27
COL9A3-205ENST00000466192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.97■■□□□ 1.271e-6■□□□□ 9.8
COL9A3-205ENST00000466192 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
COL9A3-205ENST00000466192 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
COL9A3-205ENST00000466192 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.26
COL9A3-205ENST00000466192 HOXB7P09629 217 aa22.95■■□□□ 1.26
COL9A3-205ENST00000466192 PHKG2P15735 406 aa22.95■■□□□ 1.26
COL9A3-205ENST00000466192 SLC4A10Q6U841 1118 aa22.95■■□□□ 1.26
COL9A3-205ENST00000466192 PLEKHG2Q9H7P9 1386 aa22.94■■□□□ 1.26
COL9A3-205ENST00000466192 NUCB1Q02818 461 aa22.94■■□□□ 1.26
COL9A3-205ENST00000466192 FKBP5Q13451 457 aaPredicted RBP22.94■■□□□ 1.26
COL9A3-205ENST00000466192 MEIS3Q99687 375 aa22.94■■□□□ 1.26
COL9A3-205ENST00000466192 ATP10DQ9P241 1426 aa22.94■■□□□ 1.26
COL9A3-205ENST00000466192 EIF2S2P20042 333 aaKnown RBP22.93■■□□□ 1.26
COL9A3-205ENST00000466192 CCT4P50991 539 aaKnown RBP22.93■■□□□ 1.26
COL9A3-205ENST00000466192 WDR17Q8IZU2 1322 aa22.93■■□□□ 1.26
COL9A3-205ENST00000466192 COL5A2P05997 1499 aaPredicted RBP22.93■■□□□ 1.26
COL9A3-205ENST00000466192 GCC1Q96CN9 775 aa22.93■■□□□ 1.26
COL9A3-205ENST00000466192 PARP4Q9UKK3 1724 aaKnown RBP22.91■■□□□ 1.26
COL9A3-205ENST00000466192 HEG1Q9ULI3 1381 aa22.91■■□□□ 1.26
COL9A3-205ENST00000466192 IFNL2Q8IZJ0 200 aa22.91■■□□□ 1.26
COL9A3-205ENST00000466192 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
COL9A3-205ENST00000466192 ROBO1Q9Y6N7 1651 aa22.9■■□□□ 1.26
COL9A3-205ENST00000466192 CYP27B1O15528 508 aa22.9■■□□□ 1.26
COL9A3-205ENST00000466192 SEC24BO95487 1268 aa22.9■■□□□ 1.26
COL9A3-205ENST00000466192 CHD1LQ86WJ1 897 aa22.9■■□□□ 1.26
COL9A3-205ENST00000466192 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
COL9A3-205ENST00000466192 LNPKQ9C0E8 428 aa22.9■■□□□ 1.26
COL9A3-205ENST00000466192 ANKRD44Q8N8A2 993 aa22.89■■□□□ 1.26
COL9A3-205ENST00000466192 SLC52A2Q9HAB3 445 aa22.89■■□□□ 1.26
COL9A3-205ENST00000466192 CHPF2Q9P2E5 772 aa22.89■■□□□ 1.26
COL9A3-205ENST00000466192 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-205ENST00000466192 CEP85Q6P2H3 762 aa22.89■■□□□ 1.25
COL9A3-205ENST00000466192 TOM1L2Q6ZVM7 507 aa22.89■■□□□ 1.25
COL9A3-205ENST00000466192 PXDNLA1KZ92 1463 aa22.88■■□□□ 1.25
COL9A3-205ENST00000466192 ANKRD45Q5TZF3 282 aa22.87■■□□□ 1.25
COL9A3-205ENST00000466192 RPAP2Q8IXW5 612 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-205ENST00000466192 CHMP4AQ9BY43 222 aa22.87■■□□□ 1.25
COL9A3-205ENST00000466192 LTBP4Q8N2S1 1624 aa22.87■■□□□ 1.25
COL9A3-205ENST00000466192 NFATC2IPQ8NCF5 419 aa22.86■■□□□ 1.25
COL9A3-205ENST00000466192 MRC1P22897 1456 aa22.86■■□□□ 1.25
COL9A3-205ENST00000466192 PRAMEF22A3QJZ6 481 aa22.86■■□□□ 1.25
COL9A3-205ENST00000466192 DCAF5Q96JK2 942 aa22.86■■□□□ 1.25
COL9A3-205ENST00000466192 C5P01031 1676 aa22.85■■□□□ 1.25
COL9A3-205ENST00000466192 DCTPP1Q9H773 170 aa22.85■■□□□ 1.25
COL9A3-205ENST00000466192 ANXA1P04083 346 aa22.84■■□□□ 1.25
COL9A3-205ENST00000466192 SLC39A6Q13433 755 aa22.84■■□□□ 1.25
COL9A3-205ENST00000466192 ZNF790Q6PG37 636 aa22.84■■□□□ 1.25
COL9A3-205ENST00000466192 AHDC1Q5TGY3 1603 aaPredicted RBP22.83■■□□□ 1.24
COL9A3-205ENST00000466192 CARD10Q9BWT7 1032 aa22.83■■□□□ 1.24
COL9A3-205ENST00000466192 STRN4Q9NRL3 753 aa22.83■■□□□ 1.24
COL9A3-205ENST00000466192 DBF4Q9UBU7 674 aaPredicted RBP22.83■■□□□ 1.24
COL9A3-205ENST00000466192 SHANK3Q9BYB0 1731 aa22.83■■□□□ 1.24
COL9A3-205ENST00000466192 LARP1Q6PKG0 1096 aaKnown RBP22.82■■□□□ 1.24
COL9A3-205ENST00000466192 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
COL9A3-205ENST00000466192 GNAI2P04899 355 aa22.8■■□□□ 1.24
COL9A3-205ENST00000466192 PROSER3Q2NL68 480 aa22.8■■□□□ 1.24
COL9A3-205ENST00000466192 ZCRB1Q8TBF4 217 aaKnown RBP22.8■■□□□ 1.24
COL9A3-205ENST00000466192 GNAI3P08754 354 aa22.8■■□□□ 1.24
COL9A3-205ENST00000466192 EVA1CP58658 441 aa22.8■■□□□ 1.24
COL9A3-205ENST00000466192 PCDH11XQ9BZA7 1347 aa22.79■■□□□ 1.24
COL9A3-205ENST00000466192 PCDH11YQ9BZA8 1340 aa22.79■■□□□ 1.24
COL9A3-205ENST00000466192 PI4KAP2A4QPH2 592 aa22.79■■□□□ 1.24
COL9A3-205ENST00000466192 IL2RBP14784 551 aa22.79■■□□□ 1.24
COL9A3-205ENST00000466192 SLC4A3P48751 1232 aa22.79■■□□□ 1.24
COL9A3-205ENST00000466192 PI4KAP1Q8N8J0 262 aa22.79■■□□□ 1.24
COL9A3-205ENST00000466192 USP44Q9H0E7 712 aa22.79■■□□□ 1.24
COL9A3-205ENST00000466192 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
COL9A3-205ENST00000466192 ADCY9O60503 1353 aa22.78■■□□□ 1.24
COL9A3-205ENST00000466192 DNAAF4Q8WXU2 420 aa22.77■■□□□ 1.24
COL9A3-205ENST00000466192 ZNF496Q96IT1 587 aaPredicted RBP22.77■■□□□ 1.24
COL9A3-205ENST00000466192 UPF2Q9HAU5 1272 aaKnown RBP22.77■■□□□ 1.24
COL9A3-205ENST00000466192 COL14A1Q05707 1796 aaKnown RBP22.76■■□□□ 1.23
COL9A3-205ENST00000466192 CABP4P57796 275 aa22.76■■□□□ 1.23
COL9A3-205ENST00000466192 SRCIN1Q9C0H9 1055 aa22.76■■□□□ 1.23
COL9A3-205ENST00000466192 DAXXQ9UER7 740 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-205ENST00000466192 HMMRO75330 724 aa22.76■■□□□ 1.23
COL9A3-205ENST00000466192 BEND3Q5T5X7 828 aa22.76■■□□□ 1.23
COL9A3-205ENST00000466192 PDIA6Q15084 440 aa22.75■■□□□ 1.23
COL9A3-205ENST00000466192 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms