RNA–Protein interactions for RNA: ENST00000466102.1

NPTX2-202, Transcript of neuronal pentraxin 2, humanhuman

TSL 1 (best)

Gene NPTX2, Length 843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2-202ENST00000466102 VIRMAQ69YN4 1812 aaKnown RBP23.05■■□□□ 1.28
NPTX2-202ENST00000466102 ATG3Q9NT62 314 aa23.04■■□□□ 1.28
NPTX2-202ENST00000466102 POLKQ9UBT6 870 aa23.04■■□□□ 1.28
NPTX2-202ENST00000466102 WASHC2AQ641Q2 1341 aa23.04■■□□□ 1.28
NPTX2-202ENST00000466102 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
NPTX2-202ENST00000466102 SSFA2P28290 1259 aa23.03■■□□□ 1.28
NPTX2-202ENST00000466102 EIF4A2Q14240 407 aaKnown RBP23.03■■□□□ 1.28
NPTX2-202ENST00000466102 MMP10P09238 476 aa23.02■■□□□ 1.28
NPTX2-202ENST00000466102 CDCA8Q53HL2 280 aa23.02■■□□□ 1.28
NPTX2-202ENST00000466102 SLC4A9Q96Q91 983 aa23.02■■□□□ 1.28
NPTX2-202ENST00000466102 KDRP35968 1356 aa23.01■■□□□ 1.27
NPTX2-202ENST00000466102 IFNL2Q8IZJ0 200 aa23■■□□□ 1.27
NPTX2-202ENST00000466102 ZNF831Q5JPB2 1677 aa23■■□□□ 1.27
NPTX2-202ENST00000466102 TJP1Q07157 1748 aa22.99■■□□□ 1.27
NPTX2-202ENST00000466102 RBM42Q9BTD8 480 aaKnown RBP22.99■■□□□ 1.27
NPTX2-202ENST00000466102 KDM6AO15550 1401 aaPredicted RBP22.98■■□□□ 1.27
NPTX2-202ENST00000466102 ARFGEF1Q9Y6D6 1849 aa22.96■■□□□ 1.27
NPTX2-202ENST00000466102 A0A0G2JLW4 131 aa22.96■■□□□ 1.27
NPTX2-202ENST00000466102 KIF3CO14782 793 aa22.96■■□□□ 1.27
NPTX2-202ENST00000466102 HSPA6P17066 643 aa22.96■■□□□ 1.27
NPTX2-202ENST00000466102 IFFO2Q5TF58 517 aa22.96■■□□□ 1.27
NPTX2-202ENST00000466102 C10orf71Q711Q0 1435 aa22.95■■□□□ 1.26
NPTX2-202ENST00000466102 SCN11AQ9UI33 1791 aa22.95■■□□□ 1.26
NPTX2-202ENST00000466102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.26
NPTX2-202ENST00000466102 BCS1LQ9Y276 419 aa22.94■■□□□ 1.26
NPTX2-202ENST00000466102 AEBP1Q8IUX7 1158 aa22.93■■□□□ 1.26
NPTX2-202ENST00000466102 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
NPTX2-202ENST00000466102 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
NPTX2-202ENST00000466102 DPEP1P16444 411 aa22.91■■□□□ 1.26
NPTX2-202ENST00000466102 TRAPPC3LQ5T215 181 aa22.91■■□□□ 1.26
NPTX2-202ENST00000466102 ZNF530Q6P9A1 599 aaPredicted RBP22.91■■□□□ 1.26
NPTX2-202ENST00000466102 ADAMTS7Q9UKP4 1686 aa22.9■■□□□ 1.26
NPTX2-202ENST00000466102 SBF1O95248 1867 aa22.9■■□□□ 1.26
NPTX2-202ENST00000466102 GYS1P13807 737 aa22.89■■□□□ 1.25
NPTX2-202ENST00000466102 HMGB2P26583 209 aaKnown RBP22.89■■□□□ 1.25
NPTX2-202ENST00000466102 SRP68Q9UHB9 627 aaKnown RBP22.89■■□□□ 1.25
NPTX2-202ENST00000466102 AFDNP55196 1824 aaKnown RBP22.89■■□□□ 1.25
NPTX2-202ENST00000466102 PTCD1O75127 700 aaKnown RBP22.88■■□□□ 1.25
NPTX2-202ENST00000466102 ARHGAP27Q6ZUM4 889 aa22.88■■□□□ 1.25
NPTX2-202ENST00000466102 WDR90Q96KV7 1748 aa22.88■■□□□ 1.25
NPTX2-202ENST00000466102 TRIM26Q12899 539 aaPredicted RBP22.87■■□□□ 1.25
NPTX2-202ENST00000466102 NMRK2Q9NPI5 230 aa22.87■■□□□ 1.25
NPTX2-202ENST00000466102 CCDC88AQ3V6T2 1871 aa22.86■■□□□ 1.25
NPTX2-202ENST00000466102 PANK3Q9H999 370 aa22.86■■□□□ 1.25
NPTX2-202ENST00000466102 CNTNAP4Q9C0A0 1308 aa22.85■■□□□ 1.25
NPTX2-202ENST00000466102 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
NPTX2-202ENST00000466102 FCHSD2O94868 740 aa22.85■■□□□ 1.25
NPTX2-202ENST00000466102 RFC4P35249 363 aa22.85■■□□□ 1.25
NPTX2-202ENST00000466102 CABP4P57796 275 aa22.85■■□□□ 1.25
NPTX2-202ENST00000466102 DCAF5Q96JK2 942 aa22.84■■□□□ 1.25
NPTX2-202ENST00000466102 RPS6KA4O75676 772 aa22.83■■□□□ 1.25
NPTX2-202ENST00000466102 DDR1Q08345 913 aa22.83■■□□□ 1.25
NPTX2-202ENST00000466102 PLEKHO1Q53GL0 409 aaPredicted RBP22.83■■□□□ 1.25
NPTX2-202ENST00000466102 NLGN1Q8N2Q7 840 aa22.83■■□□□ 1.25
NPTX2-202ENST00000466102 PCGF6Q9BYE7 350 aa22.83■■□□□ 1.25
NPTX2-202ENST00000466102 CCDC87Q9NVE4 849 aa22.83■■□□□ 1.25
NPTX2-202ENST00000466102 PARP3Q9Y6F1 533 aa22.83■■□□□ 1.25
NPTX2-202ENST00000466102 HSPA5P11021 654 aaKnown RBP22.82■■□□□ 1.24
NPTX2-202ENST00000466102 KCNA3P22001 575 aa22.82■■□□□ 1.24
NPTX2-202ENST00000466102 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
NPTX2-202ENST00000466102 TGFB2P61812 414 aa22.82■■□□□ 1.24
NPTX2-202ENST00000466102 FKBP8Q14318 412 aa22.82■■□□□ 1.24
NPTX2-202ENST00000466102 MTHFSP49914 203 aa22.81■■□□□ 1.24
NPTX2-202ENST00000466102 HTRA3P83110 453 aa22.81■■□□□ 1.24
NPTX2-202ENST00000466102 RC3H1Q5TC82 1133 aaKnown RBP22.81■■□□□ 1.24
NPTX2-202ENST00000466102 NFATC2IPQ8NCF5 419 aa22.81■■□□□ 1.24
NPTX2-202ENST00000466102 KCPQ6ZWJ8 1503 aa22.81■■□□□ 1.24
NPTX2-202ENST00000466102 CHRNA5P30532 468 aa22.8■■□□□ 1.24
NPTX2-202ENST00000466102 HSP90AB1P08238 724 aaKnown RBP22.79■■□□□ 1.24
NPTX2-202ENST00000466102 ADRA2BP18089 450 aa22.79■■□□□ 1.24
NPTX2-202ENST00000466102 C9orf131Q5VYM1 1079 aa22.79■■□□□ 1.24
NPTX2-202ENST00000466102 SULT6B1Q6IMI4 303 aa22.79■■□□□ 1.24
NPTX2-202ENST00000466102 DLEC1Q9Y238 1755 aa22.78■■□□□ 1.24
NPTX2-202ENST00000466102 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
NPTX2-202ENST00000466102 MORC1Q86VD1 984 aa22.77■■□□□ 1.24
NPTX2-202ENST00000466102 TNRC6CQ9HCJ0 1690 aaKnown RBP22.77■■□□□ 1.24
NPTX2-202ENST00000466102 USP42Q9H9J4 1324 aaKnown RBP22.77■■□□□ 1.24
NPTX2-202ENST00000466102 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
NPTX2-202ENST00000466102 TIAM2Q8IVF5 1701 aa22.77■■□□□ 1.23
NPTX2-202ENST00000466102 INTS5Q6P9B9 1019 aaKnown RBP22.75■■□□□ 1.23
NPTX2-202ENST00000466102 DNAJC10Q8IXB1 793 aa22.75■■□□□ 1.23
NPTX2-202ENST00000466102 PLEKHG2Q9H7P9 1386 aa22.75■■□□□ 1.23
NPTX2-202ENST00000466102 AMOTQ4VCS5 1084 aa22.74■■□□□ 1.23
NPTX2-202ENST00000466102 NRXN2Q9P2S2 1712 aa22.74■■□□□ 1.23
NPTX2-202ENST00000466102 UBR2Q8IWV8 1755 aa22.73■■□□□ 1.23
NPTX2-202ENST00000466102 TOMM70O94826 608 aa22.73■■□□□ 1.23
NPTX2-202ENST00000466102 APLP1P51693 650 aa22.73■■□□□ 1.23
NPTX2-202ENST00000466102 SLC39A6Q13433 755 aa22.73■■□□□ 1.23
NPTX2-202ENST00000466102 LGR6Q9HBX8 967 aa22.73■■□□□ 1.23
NPTX2-202ENST00000466102 IL13P35225 146 aa22.72■■□□□ 1.23
NPTX2-202ENST00000466102 RASSF7Q02833 373 aa22.72■■□□□ 1.23
NPTX2-202ENST00000466102 USPL1Q5W0Q7 1092 aa22.72■■□□□ 1.23
NPTX2-202ENST00000466102 RNF181Q9P0P0 153 aa22.72■■□□□ 1.23
NPTX2-202ENST00000466102 PIM2Q9P1W9 311 aa22.72■■□□□ 1.23
NPTX2-202ENST00000466102 ANKRD31Q8N7Z5 1873 aa22.72■■□□□ 1.23
NPTX2-202ENST00000466102 POLRMTO00411 1230 aaKnown RBP22.71■■□□□ 1.23
NPTX2-202ENST00000466102 EIF4G2P78344 907 aaKnown RBP eCLIP22.71■■□□□ 1.23
NPTX2-202ENST00000466102 DALRD3Q5D0E6 543 aaKnown RBP22.71■■□□□ 1.23
NPTX2-202ENST00000466102 DNAJC5GQ8N7S2 189 aa22.71■■□□□ 1.23
NPTX2-202ENST00000466102 MRC1P22897 1456 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms