RNA–Protein interactions for RNA: ENST00000465943.1

CAPN10-213, Transcript of calpain 10, humanhuman

TSL 4

Gene CAPN10, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-213ENST00000465943 PER1O15534 1290 aaPredicted RBP28.1■■■□□ 2.09
CAPN10-213ENST00000465943 CNGB1Q14028 1251 aaPredicted RBP28.1■■■□□ 2.09
CAPN10-213ENST00000465943 CHD4Q14839 1912 aa28.1■■■□□ 2.09
CAPN10-213ENST00000465943 ITPK1Q13572 414 aa28.09■■■□□ 2.09
CAPN10-213ENST00000465943 HSP90AB1P08238 724 aaKnown RBP28.08■■■□□ 2.09
CAPN10-213ENST00000465943 MTHFSP49914 203 aa28.08■■■□□ 2.09
CAPN10-213ENST00000465943 AMOTQ4VCS5 1084 aa28.08■■■□□ 2.09
CAPN10-213ENST00000465943 NLGN2Q8NFZ4 835 aa28.08■■■□□ 2.09
CAPN10-213ENST00000465943 DCAF5Q96JK2 942 aa28.08■■■□□ 2.09
CAPN10-213ENST00000465943 HMGB2P26583 209 aaKnown RBP28.07■■■□□ 2.08
CAPN10-213ENST00000465943 ATP6V1AP38606 617 aa28.07■■■□□ 2.08
CAPN10-213ENST00000465943 FLAD1Q8NFF5 587 aa28.07■■■□□ 2.08
CAPN10-213ENST00000465943 C1orf141Q5JVX7 400 aa28.06■■■□□ 2.08
CAPN10-213ENST00000465943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.05■■■□□ 2.08
CAPN10-213ENST00000465943 ERVV-2B6SEH9 535 aa28.05■■■□□ 2.08
CAPN10-213ENST00000465943 TJP1Q07157 1748 aa28.04■■■□□ 2.08
CAPN10-213ENST00000465943 GNPATO15228 680 aa28.03■■■□□ 2.08
CAPN10-213ENST00000465943 PELP1Q8IZL8 1130 aaKnown RBP28.03■■■□□ 2.08
CAPN10-213ENST00000465943 COL3A1P02461 1466 aaPredicted RBP28.02■■■□□ 2.08
CAPN10-213ENST00000465943 C4AP0C0L4 1744 aa28.02■■■□□ 2.08
CAPN10-213ENST00000465943 HMOX1P09601 288 aa28.02■■■□□ 2.08
CAPN10-213ENST00000465943 CABP4P57796 275 aa28.02■■■□□ 2.08
CAPN10-213ENST00000465943 RBM42Q9BTD8 480 aaKnown RBP28.02■■■□□ 2.08
CAPN10-213ENST00000465943 GPR162Q16538 588 aa28.01■■■□□ 2.07
CAPN10-213ENST00000465943 SLC4A9Q96Q91 983 aa28.01■■■□□ 2.07
CAPN10-213ENST00000465943 SSFA2P28290 1259 aa28■■■□□ 2.07
CAPN10-213ENST00000465943 CICQ96RK0 1608 aaPredicted RBP28■■■□□ 2.07
CAPN10-213ENST00000465943 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
CAPN10-213ENST00000465943 ADAMTS7Q9UKP4 1686 aa27.97■■■□□ 2.07
CAPN10-213ENST00000465943 DIAPH1O60610 1272 aaKnown RBP27.97■■■□□ 2.07
CAPN10-213ENST00000465943 MRC1P22897 1456 aa27.96■■■□□ 2.07
CAPN10-213ENST00000465943 MYH14Q7Z406 1995 aaKnown RBP27.96■■■□□ 2.07
CAPN10-213ENST00000465943 NFATC2IPQ8NCF5 419 aa27.95■■■□□ 2.06
CAPN10-213ENST00000465943 AKAP4Q5JQC9 854 aa27.94■■■□□ 2.06
CAPN10-213ENST00000465943 PTCD1O75127 700 aaKnown RBP27.93■■■□□ 2.06
CAPN10-213ENST00000465943 RTCBQ9Y3I0 505 aaKnown RBP27.91■■■□□ 2.06
CAPN10-213ENST00000465943 CNTNAP4Q9C0A0 1308 aa27.91■■■□□ 2.06
CAPN10-213ENST00000465943 YBX3P16989 372 aaKnown RBP eCLIP27.9■■■□□ 2.06
CAPN10-213ENST00000465943 MTHFSDQ2M296 383 aaKnown RBP27.89■■■□□ 2.06
CAPN10-213ENST00000465943 LGR6Q9HBX8 967 aa27.89■■■□□ 2.06
CAPN10-213ENST00000465943 CD2APQ9Y5K6 639 aa27.89■■■□□ 2.06
CAPN10-213ENST00000465943 UTRNP46939 3433 aa27.89■■■□□ 2.05
CAPN10-213ENST00000465943 U2SURPO15042 1029 aaKnown RBP27.88■■■□□ 2.05
CAPN10-213ENST00000465943 UBR2Q8IWV8 1755 aa27.88■■■□□ 2.05
CAPN10-213ENST00000465943 KIF13BQ9NQT8 1826 aa27.88■■■□□ 2.05
CAPN10-213ENST00000465943 KIAA1551Q9HCM1 1747 aa27.87■■■□□ 2.05
CAPN10-213ENST00000465943 ZNF784Q8NCA9 323 aaPredicted RBP27.87■■■□□ 2.05
CAPN10-213ENST00000465943 SLC52A2Q9HAB3 445 aa27.87■■■□□ 2.05
CAPN10-213ENST00000465943 KCPQ6ZWJ8 1503 aa27.87■■■□□ 2.05
CAPN10-213ENST00000465943 TRAPPC3LQ5T215 181 aa27.86■■■□□ 2.05
CAPN10-213ENST00000465943 RNMTO43148 476 aaKnown RBP27.85■■■□□ 2.05
CAPN10-213ENST00000465943 RC3H1Q5TC82 1133 aaKnown RBP27.85■■■□□ 2.05
CAPN10-213ENST00000465943 SIPA1L3O60292 1781 aaPredicted RBP27.85■■■□□ 2.05
CAPN10-213ENST00000465943 N4BP2Q86UW6 1770 aaPredicted RBP27.84■■■□□ 2.05
CAPN10-213ENST00000465943 WWC3Q9ULE0 1092 aa27.84■■■□□ 2.05
CAPN10-213ENST00000465943 RPS6KA4O75676 772 aa27.83■■■□□ 2.05
CAPN10-213ENST00000465943 MMP10P09238 476 aa27.83■■■□□ 2.05
CAPN10-213ENST00000465943 CRKLP46109 303 aaKnown RBP27.83■■■□□ 2.05
CAPN10-213ENST00000465943 ARHGEF1Q92888 912 aaKnown RBP27.83■■■□□ 2.05
CAPN10-213ENST00000465943 ADRA2BP18089 450 aa27.82■■■□□ 2.04
CAPN10-213ENST00000465943 SLC39A6Q13433 755 aa27.82■■■□□ 2.04
CAPN10-213ENST00000465943 GOLGB1Q14789 3259 aaKnown RBP27.81■■■□□ 2.04
CAPN10-213ENST00000465943 RFC4P35249 363 aa27.8■■■□□ 2.04
CAPN10-213ENST00000465943 DNAJC10Q8IXB1 793 aa27.79■■■□□ 2.04
CAPN10-213ENST00000465943 GRIN3BO60391 1043 aa27.78■■■□□ 2.04
CAPN10-213ENST00000465943 GYS1P13807 737 aa27.78■■■□□ 2.04
CAPN10-213ENST00000465943 PXDNLA1KZ92 1463 aa27.77■■■□□ 2.04
CAPN10-213ENST00000465943 C10orf71Q711Q0 1435 aa27.77■■■□□ 2.04
CAPN10-213ENST00000465943 CFAP53Q96M91 514 aa27.77■■■□□ 2.04
CAPN10-213ENST00000465943 SRP68Q9UHB9 627 aaKnown RBP27.76■■■□□ 2.03
CAPN10-213ENST00000465943 PPP2R1AP30153 589 aa27.75■■■□□ 2.03
CAPN10-213ENST00000465943 NLGN1Q8N2Q7 840 aa27.75■■■□□ 2.03
CAPN10-213ENST00000465943 INTS5Q6P9B9 1019 aaKnown RBP27.74■■■□□ 2.03
CAPN10-213ENST00000465943 GAS2L2Q8NHY3 880 aa27.74■■■□□ 2.03
CAPN10-213ENST00000465943 BRCA1P38398 1863 aaKnown RBP27.74■■■□□ 2.03
CAPN10-213ENST00000465943 USP42Q9H9J4 1324 aaKnown RBP27.73■■■□□ 2.03
CAPN10-213ENST00000465943 CCDC87Q9NVE4 849 aa27.73■■■□□ 2.03
CAPN10-213ENST00000465943 PRKAR2BP31323 418 aa27.72■■■□□ 2.03
CAPN10-213ENST00000465943 RSPH6AQ9H0K4 717 aa27.72■■■□□ 2.03
CAPN10-213ENST00000465943 GNAT3A8MTJ3 354 aa27.71■■■□□ 2.03
CAPN10-213ENST00000465943 SOS1Q07889 1333 aaPredicted RBP27.7■■■□□ 2.03
CAPN10-213ENST00000465943 CYP19A1P11511 503 aaPredicted RBP27.7■■■□□ 2.02
CAPN10-213ENST00000465943 PARP3Q9Y6F1 533 aa27.7■■■□□ 2.02
CAPN10-213ENST00000465943 FKBP8Q14318 412 aa27.69■■■□□ 2.02
CAPN10-213ENST00000465943 IL17REQ8NFR9 667 aa27.69■■■□□ 2.02
CAPN10-213ENST00000465943 PHACTR3Q96KR7 559 aa27.69■■■□□ 2.02
CAPN10-213ENST00000465943 TEFQ10587 303 aa27.68■■■□□ 2.02
CAPN10-213ENST00000465943 TTC5Q8N0Z6 440 aa27.68■■■□□ 2.02
CAPN10-213ENST00000465943 ZBTB1Q9Y2K1 713 aa27.68■■■□□ 2.02
CAPN10-213ENST00000465943 COL15A1P39059 1388 aa27.68■■■□□ 2.02
CAPN10-213ENST00000465943 U2AF1L5P0DN76 240 aaPredicted RBP27.67■■■□□ 2.02
CAPN10-213ENST00000465943 U2AF1Q01081 240 aaKnown RBP eCLIP27.67■■■□□ 2.02
CAPN10-213ENST00000465943 NUDCQ9Y266 331 aa27.67■■■□□ 2.02
CAPN10-213ENST00000465943 AFDNP55196 1824 aaKnown RBP27.67■■■□□ 2.02
CAPN10-213ENST00000465943 SCN7AQ01118 1682 aa27.65■■■□□ 2.02
CAPN10-213ENST00000465943 DDR1Q08345 913 aa27.65■■■□□ 2.02
CAPN10-213ENST00000465943 USPL1Q5W0Q7 1092 aa27.65■■■□□ 2.02
CAPN10-213ENST00000465943 ATP10DQ9P241 1426 aa27.65■■■□□ 2.02
CAPN10-213ENST00000465943 CEMIPQ8WUJ3 1361 aa27.64■■■□□ 2.02
CAPN10-213ENST00000465943 A0A0G2JLW4 131 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms