RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 INSM2Q96T92 566 aaPredicted RBP7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 ZNF395Q9H8N7 513 aaPredicted RBP7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 PCDHB9Q9Y5E1 797 aa7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 GLI2P10070 1586 aa7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 EFCAB5A4FU69 1503 aa7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 NUP153P49790 1475 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 GIGYF1O75420 1035 aaPredicted RBP7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 ADH1AP07327 375 aa7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 PTSQ03393 145 aa7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 SEPT12Q8IYM1 358 aa7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 KDF1Q8NAX2 398 aaPredicted RBP7.88□□□□□ -1.15
EXOSC3-204ENST00000465860 WDR7Q9Y4E6 1490 aa7.87□□□□□ -1.15
EXOSC3-204ENST00000465860 ZSCAN1Q8NBB4 408 aa7.87□□□□□ -1.15
EXOSC3-204ENST00000465860 SNRKQ9NRH2 765 aa7.87□□□□□ -1.15
EXOSC3-204ENST00000465860 POLMQ9NP87 494 aaPredicted RBP7.86□□□□□ -1.15
EXOSC3-204ENST00000465860 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
EXOSC3-204ENST00000465860 CDK13Q14004 1512 aaKnown RBP7.85□□□□□ -1.15
EXOSC3-204ENST00000465860 SOCS7O14512 581 aa7.85□□□□□ -1.15
EXOSC3-204ENST00000465860 PTGIRP43119 386 aa7.85□□□□□ -1.15
EXOSC3-204ENST00000465860 NR1H3Q13133 447 aa7.85□□□□□ -1.15
EXOSC3-204ENST00000465860 RNF217Q8TC41 542 aa7.85□□□□□ -1.15
EXOSC3-204ENST00000465860 CFAP43Q8NDM7 1665 aa7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 COL17A1Q9UMD9 1497 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 SLC35F4A4IF30 521 aa7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 FOXD4L5Q5VV16 416 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 CCDC155Q8N6L0 562 aa7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 GPR161Q8N6U8 529 aaKnown RBP7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 NDUFB9Q9Y6M9 179 aa7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 KDM6BO15054 1643 aa7.84□□□□□ -1.15
EXOSC3-204ENST00000465860 ABCA9Q8IUA7 1624 aa7.82□□□□□ -1.16
EXOSC3-204ENST00000465860 LOC105371045A0A1W2PR82 267 aa7.82□□□□□ -1.16
EXOSC3-204ENST00000465860 PCF11O94913 1555 aaKnown RBP7.82□□□□□ -1.16
EXOSC3-204ENST00000465860 SENP3-EIF4A1A0A087X0R7 540 aa7.81□□□□□ -1.16
EXOSC3-204ENST00000465860 FAM181BA6NEQ2 426 aa7.81□□□□□ -1.16
EXOSC3-204ENST00000465860 HECW1Q76N89 1606 aa7.81□□□□□ -1.16
EXOSC3-204ENST00000465860 TTC37Q6PGP7 1564 aa7.8□□□□□ -1.16
EXOSC3-204ENST00000465860 ITGA6P23229 1130 aa7.8□□□□□ -1.16
EXOSC3-204ENST00000465860 MCCD1P59942 119 aaPredicted RBP7.8□□□□□ -1.16
EXOSC3-204ENST00000465860 ERVK-9P63128 1117 aa7.8□□□□□ -1.16
EXOSC3-204ENST00000465860 KRT76Q01546 638 aa7.8□□□□□ -1.16
EXOSC3-204ENST00000465860 RNF20Q5VTR2 975 aa7.8□□□□□ -1.16
EXOSC3-204ENST00000465860 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
EXOSC3-204ENST00000465860 CLIP1P30622 1438 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 CD109Q6YHK3 1445 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 KIF14Q15058 1648 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 APBB1O00213 710 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 CC2D2BQ6DHV5 1058 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 CCDC125Q86Z20 511 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 TBC1D2BQ9UPU7 963 aa7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 ZNF330Q9Y3S2 320 aaPredicted RBP7.79□□□□□ -1.16
EXOSC3-204ENST00000465860 FMN1Q68DA7 1419 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 MAGI3Q5TCQ9 1506 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 SCTRP47872 440 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 RNF144AP50876 292 aaPredicted RBP7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 VWA5B2Q8N398 1253 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 TRIM52Q96A61 297 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 CNTNAP3BQ96NU0 1288 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 CNTNAP3Q9BZ76 1288 aa7.78□□□□□ -1.16
EXOSC3-204ENST00000465860 CDC14CA4D256 554 aa7.77□□□□□ -1.17
EXOSC3-204ENST00000465860 PRICKLE2Q7Z3G6 844 aa7.77□□□□□ -1.17
EXOSC3-204ENST00000465860 ZNF592Q92610 1267 aa7.77□□□□□ -1.17
EXOSC3-204ENST00000465860 COL25A1Q9BXS0 654 aaPredicted RBP7.77□□□□□ -1.17
EXOSC3-204ENST00000465860 PCDHB11Q9Y5F2 797 aa7.77□□□□□ -1.17
EXOSC3-204ENST00000465860 CEP162Q5TB80 1403 aa7.77□□□□□ -1.17
EXOSC3-204ENST00000465860 CASKIN1Q8WXD9 1431 aa7.77□□□□□ -1.17
EXOSC3-204ENST00000465860 TEX14Q8IWB6 1497 aa7.76□□□□□ -1.17
EXOSC3-204ENST00000465860 A0A1W2PRU2 124 aa7.76□□□□□ -1.17
EXOSC3-204ENST00000465860 MEN1O00255 615 aa7.76□□□□□ -1.17
EXOSC3-204ENST00000465860 PRKCSHP14314 528 aaPredicted RBP7.76□□□□□ -1.17
EXOSC3-204ENST00000465860 RHOQP17081 205 aa7.75□□□□□ -1.17
EXOSC3-204ENST00000465860 RNFT1Q5M7Z0 435 aa7.75□□□□□ -1.17
EXOSC3-204ENST00000465860 SV2AQ7L0J3 742 aa7.75□□□□□ -1.17
EXOSC3-204ENST00000465860 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
EXOSC3-204ENST00000465860 CEP126Q9P2H0 1117 aa7.75□□□□□ -1.17
EXOSC3-204ENST00000465860 FRMPD1Q5SYB0 1578 aa7.75□□□□□ -1.17
EXOSC3-204ENST00000465860 PLEKHD1A6NEE1 506 aa7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 TRAK2O60296 914 aa7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 GPC1P35052 558 aa7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 IRF5Q13568 498 aa7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 CYP2U1Q7Z449 544 aa7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 CUEDC1Q9NWM3 386 aaPredicted RBP7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 CDC42BPBQ9Y5S2 1711 aa7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 FYCO1Q9BQS8 1478 aa7.74□□□□□ -1.17
EXOSC3-204ENST00000465860 RICTORQ6R327 1708 aa7.73□□□□□ -1.17
EXOSC3-204ENST00000465860 MYO5CQ9NQX4 1742 aa7.73□□□□□ -1.17
EXOSC3-204ENST00000465860 CCDC85AQ96PX6 553 aaPredicted RBP7.73□□□□□ -1.17
EXOSC3-204ENST00000465860 CDCA7Q9BWT1 371 aaPredicted RBP7.73□□□□□ -1.17
EXOSC3-204ENST00000465860 ARAP3Q8WWN8 1544 aa7.73□□□□□ -1.17
EXOSC3-204ENST00000465860 CLN3Q13286 438 aa7.72□□□□□ -1.17
EXOSC3-204ENST00000465860 ARHGEF10LQ9HCE6 1279 aa7.72□□□□□ -1.17
EXOSC3-204ENST00000465860 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
EXOSC3-204ENST00000465860 TROQ12816 1431 aaPredicted RBP7.71□□□□□ -1.17
EXOSC3-204ENST00000465860 NEO1Q92859 1461 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 RAPGEF3O95398 923 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 POU4F2Q12837 409 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 NLRP3Q96P20 1036 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms