RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 PXDNLA1KZ92 1463 aa16.43■□□□□ 0.22
CNOT4-208ENST00000465721 KDRP35968 1356 aa16.43■□□□□ 0.22
CNOT4-208ENST00000465721 WWC3Q9ULE0 1092 aa16.43■□□□□ 0.22
CNOT4-208ENST00000465721 HSPA6P17066 643 aa16.42■□□□□ 0.22
CNOT4-208ENST00000465721 ITPK1Q13572 414 aa16.42■□□□□ 0.22
CNOT4-208ENST00000465721 ZNF526Q8TF50 670 aaPredicted RBP16.42■□□□□ 0.22
CNOT4-208ENST00000465721 WASHC2AQ641Q2 1341 aa16.42■□□□□ 0.22
CNOT4-208ENST00000465721 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
CNOT4-208ENST00000465721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.41■□□□□ 0.22
CNOT4-208ENST00000465721 SPG7Q9UQ90 795 aa16.41■□□□□ 0.22
CNOT4-208ENST00000465721 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
CNOT4-208ENST00000465721 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
CNOT4-208ENST00000465721 GNPATO15228 680 aa16.4■□□□□ 0.22
CNOT4-208ENST00000465721 EYA1Q99502 592 aa16.4■□□□□ 0.22
CNOT4-208ENST00000465721 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
CNOT4-208ENST00000465721 ASAP1Q9ULH1 1129 aa16.4■□□□□ 0.22
CNOT4-208ENST00000465721 PLEKHG2Q9H7P9 1386 aa16.39■□□□□ 0.21
CNOT4-208ENST00000465721 PHKG2P15735 406 aa16.39■□□□□ 0.21
CNOT4-208ENST00000465721 TJP1Q07157 1748 aa16.39■□□□□ 0.21
CNOT4-208ENST00000465721 KIF3CO14782 793 aa16.38■□□□□ 0.21
CNOT4-208ENST00000465721 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
CNOT4-208ENST00000465721 WDR90Q96KV7 1748 aa16.37■□□□□ 0.21
CNOT4-208ENST00000465721 MMP10P09238 476 aa16.37■□□□□ 0.21
CNOT4-208ENST00000465721 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
CNOT4-208ENST00000465721 SBF1O95248 1867 aa16.37■□□□□ 0.21
CNOT4-208ENST00000465721 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
CNOT4-208ENST00000465721 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
CNOT4-208ENST00000465721 IFNL2Q8IZJ0 200 aa16.36■□□□□ 0.21
CNOT4-208ENST00000465721 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
CNOT4-208ENST00000465721 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
CNOT4-208ENST00000465721 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
CNOT4-208ENST00000465721 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
CNOT4-208ENST00000465721 PCNTO95613 3336 aa16.33■□□□□ 0.2
CNOT4-208ENST00000465721 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.2
CNOT4-208ENST00000465721 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
CNOT4-208ENST00000465721 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
CNOT4-208ENST00000465721 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
CNOT4-208ENST00000465721 TNRC6CQ9HCJ0 1690 aaKnown RBP16.31■□□□□ 0.2
CNOT4-208ENST00000465721 TGFB2P61812 414 aa16.31■□□□□ 0.2
CNOT4-208ENST00000465721 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
CNOT4-208ENST00000465721 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
CNOT4-208ENST00000465721 A0A0G2JLW4 131 aa16.29■□□□□ 0.2
CNOT4-208ENST00000465721 ERVV-2B6SEH9 535 aa16.29■□□□□ 0.2
CNOT4-208ENST00000465721 GYS1P13807 737 aa16.29■□□□□ 0.2
CNOT4-208ENST00000465721 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
CNOT4-208ENST00000465721 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
CNOT4-208ENST00000465721 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
CNOT4-208ENST00000465721 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
CNOT4-208ENST00000465721 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
CNOT4-208ENST00000465721 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
CNOT4-208ENST00000465721 CCDC88AQ3V6T2 1871 aa16.28■□□□□ 0.2
CNOT4-208ENST00000465721 DPEP1P16444 411 aa16.27■□□□□ 0.2
CNOT4-208ENST00000465721 APLP1P51693 650 aa16.27■□□□□ 0.2
CNOT4-208ENST00000465721 DCAF5Q96JK2 942 aa16.27■□□□□ 0.2
CNOT4-208ENST00000465721 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
CNOT4-208ENST00000465721 NRXN2Q9P2S2 1712 aa16.27■□□□□ 0.19
CNOT4-208ENST00000465721 RPS6KA4O75676 772 aa16.26■□□□□ 0.19
CNOT4-208ENST00000465721 TOMM70O94826 608 aa16.26■□□□□ 0.19
CNOT4-208ENST00000465721 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
CNOT4-208ENST00000465721 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
CNOT4-208ENST00000465721 NMRK2Q9NPI5 230 aa16.26■□□□□ 0.19
CNOT4-208ENST00000465721 KCNA3P22001 575 aa16.25■□□□□ 0.19
CNOT4-208ENST00000465721 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
CNOT4-208ENST00000465721 FCHSD2O94868 740 aa16.24■□□□□ 0.19
CNOT4-208ENST00000465721 RFC4P35249 363 aa16.24■□□□□ 0.19
CNOT4-208ENST00000465721 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
CNOT4-208ENST00000465721 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
CNOT4-208ENST00000465721 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
CNOT4-208ENST00000465721 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
CNOT4-208ENST00000465721 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
CNOT4-208ENST00000465721 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
CNOT4-208ENST00000465721 MRC1P22897 1456 aa16.23■□□□□ 0.19
CNOT4-208ENST00000465721 USP42Q9H9J4 1324 aaKnown RBP16.23■□□□□ 0.19
CNOT4-208ENST00000465721 PLEKHO1Q53GL0 409 aaPredicted RBP16.23■□□□□ 0.19
CNOT4-208ENST00000465721 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
CNOT4-208ENST00000465721 CABP4P57796 275 aa16.22■□□□□ 0.19
CNOT4-208ENST00000465721 DDR1Q08345 913 aa16.22■□□□□ 0.19
CNOT4-208ENST00000465721 AEBP1Q8IUX7 1158 aa16.22■□□□□ 0.19
CNOT4-208ENST00000465721 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
CNOT4-208ENST00000465721 AMOTQ4VCS5 1084 aa16.21■□□□□ 0.19
CNOT4-208ENST00000465721 C9orf131Q5VYM1 1079 aa16.21■□□□□ 0.19
CNOT4-208ENST00000465721 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
CNOT4-208ENST00000465721 FKBP8Q14318 412 aa16.2■□□□□ 0.18
CNOT4-208ENST00000465721 RBM46Q8TBY0 533 aaKnown RBP16.2■□□□□ 0.18
CNOT4-208ENST00000465721 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
CNOT4-208ENST00000465721 ANKRD31Q8N7Z5 1873 aa16.19■□□□□ 0.18
CNOT4-208ENST00000465721 MTHFSP49914 203 aa16.19■□□□□ 0.18
CNOT4-208ENST00000465721 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
CNOT4-208ENST00000465721 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
CNOT4-208ENST00000465721 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
CNOT4-208ENST00000465721 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
CNOT4-208ENST00000465721 PIM2Q9P1W9 311 aa16.18■□□□□ 0.18
CNOT4-208ENST00000465721 COL11A2P13942 1736 aaPredicted RBP16.17■□□□□ 0.18
CNOT4-208ENST00000465721 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
CNOT4-208ENST00000465721 DALRD3Q5D0E6 543 aaKnown RBP16.17■□□□□ 0.18
CNOT4-208ENST00000465721 INTS5Q6P9B9 1019 aaKnown RBP16.17■□□□□ 0.18
CNOT4-208ENST00000465721 SCN7AQ01118 1682 aa16.17■□□□□ 0.18
CNOT4-208ENST00000465721 CACNA1SQ13698 1873 aa16.16■□□□□ 0.18
CNOT4-208ENST00000465721 SIPA1L3O60292 1781 aaPredicted RBP16.16■□□□□ 0.18
CNOT4-208ENST00000465721 CHRNA5P30532 468 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms