RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 IGSF5Q9NSI5 407 aa7.22□□□□□ -1.25
CDK13-203ENST00000465643 SYNJ1O43426 1573 aa7.21□□□□□ -1.25
CDK13-203ENST00000465643 ARHGAP4P98171 946 aa7.21□□□□□ -1.26
CDK13-203ENST00000465643 TMPRSS4Q9NRS4 437 aa7.21□□□□□ -1.26
CDK13-203ENST00000465643 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
CDK13-203ENST00000465643 MAPK1P28482 360 aa7.2□□□□□ -1.26
CDK13-203ENST00000465643 SEPT12Q8IYM1 358 aa7.2□□□□□ -1.26
CDK13-203ENST00000465643 FGD5Q6ZNL6 1462 aa7.2□□□□□ -1.26
CDK13-203ENST00000465643 C21orf2O43822 256 aa7.2□□□□□ -1.26
CDK13-203ENST00000465643 ERCC3P19447 782 aa7.2□□□□□ -1.26
CDK13-203ENST00000465643 VASH1Q7L8A9 365 aaPredicted RBP7.2□□□□□ -1.26
CDK13-203ENST00000465643 TNS4Q8IZW8 715 aa7.2□□□□□ -1.26
CDK13-203ENST00000465643 TOP2BQ02880 1626 aa7.2□□□□□ -1.26
CDK13-203ENST00000465643 TRIM32Q13049 653 aa7.19□□□□□ -1.26
CDK13-203ENST00000465643 POLA1P09884 1462 aaPredicted RBP7.19□□□□□ -1.26
CDK13-203ENST00000465643 BIVM-ERCC5R4GMW8 1640 aa7.19□□□□□ -1.26
CDK13-203ENST00000465643 MYCP01106 439 aaPredicted RBP7.19□□□□□ -1.26
CDK13-203ENST00000465643 SCNN1DP51172 638 aa7.19□□□□□ -1.26
CDK13-203ENST00000465643 ARID5BQ14865 1188 aa7.19□□□□□ -1.26
CDK13-203ENST00000465643 SOGA1O94964 1423 aa7.19□□□□□ -1.26
CDK13-203ENST00000465643 OSBPL3Q9H4L5 887 aa7.18□□□□□ -1.26
CDK13-203ENST00000465643 CYLDQ9NQC7 956 aa7.18□□□□□ -1.26
CDK13-203ENST00000465643 SERTAD1Q9UHV2 236 aa7.18□□□□□ -1.26
CDK13-203ENST00000465643 IFT140Q96RY7 1462 aa7.18□□□□□ -1.26
CDK13-203ENST00000465643 RAD54L2Q9Y4B4 1467 aa7.18□□□□□ -1.26
CDK13-203ENST00000465643 RNF223E7ERA6 249 aa7.18□□□□□ -1.26
CDK13-203ENST00000465643 FKBP4Q02790 459 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDK13-203ENST00000465643 TBCELQ5QJ74 424 aa7.18□□□□□ -1.26
CDK13-203ENST00000465643 SCG3Q8WXD2 468 aaKnown RBP7.18□□□□□ -1.26
CDK13-203ENST00000465643 M0R2N6 131 aa7.17□□□□□ -1.26
CDK13-203ENST00000465643 ZBTB24O43167 697 aaPredicted RBP7.17□□□□□ -1.26
CDK13-203ENST00000465643 ERVK-9P63128 1117 aa7.17□□□□□ -1.26
CDK13-203ENST00000465643 CHMP7Q8WUX9 453 aaPredicted RBP7.17□□□□□ -1.26
CDK13-203ENST00000465643 SAP130Q9H0E3 1048 aa7.17□□□□□ -1.26
CDK13-203ENST00000465643 TSPAN10Q9H1Z9 355 aaPredicted RBP7.17□□□□□ -1.26
CDK13-203ENST00000465643 CDV3Q9UKY7 258 aaKnown RBP7.17□□□□□ -1.26
CDK13-203ENST00000465643 GDF10P55107 478 aa7.16□□□□□ -1.26
CDK13-203ENST00000465643 FBXO33Q7Z6M2 555 aa7.16□□□□□ -1.26
CDK13-203ENST00000465643 DCTN4Q9UJW0 460 aa7.16□□□□□ -1.26
CDK13-203ENST00000465643 FSHRP23945 695 aa7.16□□□□□ -1.26
CDK13-203ENST00000465643 ETNK1Q9HBU6 452 aa7.16□□□□□ -1.26
CDK13-203ENST00000465643 TLL2Q9Y6L7 1015 aa7.16□□□□□ -1.26
CDK13-203ENST00000465643 VARSP26640 1264 aaKnown RBP7.15□□□□□ -1.26
CDK13-203ENST00000465643 GRM5P41594 1212 aa7.15□□□□□ -1.26
CDK13-203ENST00000465643 CC2D2BQ6DHV5 1058 aa7.15□□□□□ -1.26
CDK13-203ENST00000465643 ASB16Q96NS5 453 aa7.15□□□□□ -1.26
CDK13-203ENST00000465643 PTCD1O75127 700 aaKnown RBP7.15□□□□□ -1.27
CDK13-203ENST00000465643 EPHA4P54764 986 aa7.15□□□□□ -1.27
CDK13-203ENST00000465643 ZNF784Q8NCA9 323 aaPredicted RBP7.15□□□□□ -1.27
CDK13-203ENST00000465643 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 IGFBP4P22692 258 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 MPSTP25325 297 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 EHBP1Q8NDI1 1231 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 HELQQ8TDG4 1101 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 RAB6BQ9NRW1 208 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 MAP4K5Q9Y4K4 846 aa7.14□□□□□ -1.27
CDK13-203ENST00000465643 TDRD9Q8NDG6 1382 aaKnown RBP7.14□□□□□ -1.27
CDK13-203ENST00000465643 TARBP1Q13395 1621 aaKnown RBP7.14□□□□□ -1.27
CDK13-203ENST00000465643 SF3B2Q13435 895 aaKnown RBP7.13□□□□□ -1.27
CDK13-203ENST00000465643 USP35Q9P2H5 1018 aa7.13□□□□□ -1.27
CDK13-203ENST00000465643 ZNF608Q9ULD9 1512 aaPredicted RBP7.13□□□□□ -1.27
CDK13-203ENST00000465643 INHAP05111 366 aa7.13□□□□□ -1.27
CDK13-203ENST00000465643 ESF1Q9H501 851 aaKnown RBP7.13□□□□□ -1.27
CDK13-203ENST00000465643 ADD1P35611 737 aaKnown RBP7.12□□□□□ -1.27
CDK13-203ENST00000465643 AQRO60306 1485 aaKnown RBP eCLIP7.12□□□□□ -1.272e-6■■■■■ 32.5
CDK13-203ENST00000465643 LILRA1O75019 489 aa7.12□□□□□ -1.27
CDK13-203ENST00000465643 WNT7BP56706 349 aa7.12□□□□□ -1.27
CDK13-203ENST00000465643 ABCA10Q8WWZ4 1543 aa7.12□□□□□ -1.27
CDK13-203ENST00000465643 FOXO3O43524 673 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 ZNF326Q5BKZ1 582 aaKnown RBP7.11□□□□□ -1.27
CDK13-203ENST00000465643 RC3H1Q5TC82 1133 aaKnown RBP7.11□□□□□ -1.27
CDK13-203ENST00000465643 TMC7Q7Z402 723 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 FAM26DQ5JW98 314 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 ANKLE1Q8NAG6 615 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 COL26A1Q96A83 441 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
CDK13-203ENST00000465643 P4HBP07237 508 aaKnown RBP7.1□□□□□ -1.27
CDK13-203ENST00000465643 TCF3P15923 654 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
CDK13-203ENST00000465643 CCDC87Q9NVE4 849 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 WDR97A6NE52 1622 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 EIF4G3O43432 1585 aaKnown RBP7.1□□□□□ -1.27
CDK13-203ENST00000465643 BACH1O14867 736 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 PPP1R12BO60237 982 aaPredicted RBP7.1□□□□□ -1.27
CDK13-203ENST00000465643 NR3C2P08235 984 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 KCNC4Q03721 635 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 ZSCAN29Q8IWY8 852 aaPredicted RBP7.1□□□□□ -1.27
CDK13-203ENST00000465643 RGL4Q8IZJ4 473 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 GAPVD1Q14C86 1478 aa7.1□□□□□ -1.27
CDK13-203ENST00000465643 KIF27Q86VH2 1401 aa7.09□□□□□ -1.27
CDK13-203ENST00000465643 WASLO00401 505 aaPredicted RBP7.09□□□□□ -1.27
CDK13-203ENST00000465643 RECKO95980 971 aa7.09□□□□□ -1.27
CDK13-203ENST00000465643 NPR3P17342 541 aa7.09□□□□□ -1.27
CDK13-203ENST00000465643 COX20Q5RI15 118 aa7.09□□□□□ -1.27
CDK13-203ENST00000465643 PPP1R18Q6NYC8 613 aa7.09□□□□□ -1.27
CDK13-203ENST00000465643 SLC9A9Q8IVB4 645 aa7.09□□□□□ -1.27
CDK13-203ENST00000465643 EMID1Q96A84 441 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms