RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 NUCKS1Q9H1E3 243 aaKnown RBP11.78□□□□□ -0.52
SMC4-205ENST00000465563 A0A1B0GTH6 734 aa11.77□□□□□ -0.53
SMC4-205ENST00000465563 RNF225M0QZC1 329 aaPredicted RBP11.77□□□□□ -0.53
SMC4-205ENST00000465563 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.53
SMC4-205ENST00000465563 PLPP7Q8NBV4 271 aa11.77□□□□□ -0.53
SMC4-205ENST00000465563 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
SMC4-205ENST00000465563 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
SMC4-205ENST00000465563 GPAMQ9HCL2 828 aa11.76□□□□□ -0.53
SMC4-205ENST00000465563 TLR1Q15399 786 aa11.75□□□□□ -0.53
SMC4-205ENST00000465563 C4orf17Q53FE4 359 aa11.75□□□□□ -0.53
SMC4-205ENST00000465563 IGF1RP08069 1367 aa11.75□□□□□ -0.53
SMC4-205ENST00000465563 CELA2BP08218 269 aaPredicted RBP11.74□□□□□ -0.53
SMC4-205ENST00000465563 WWC1Q8IX03 1113 aa11.74□□□□□ -0.53
SMC4-205ENST00000465563 GSK3AP49840 483 aa11.73□□□□□ -0.53
SMC4-205ENST00000465563 MARSP56192 900 aaKnown RBP11.73□□□□□ -0.53
SMC4-205ENST00000465563 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
SMC4-205ENST00000465563 RHBDD1Q8TEB9 315 aa11.73□□□□□ -0.53
SMC4-205ENST00000465563 NSFL1CQ9UNZ2 370 aaKnown RBP11.73□□□□□ -0.53
SMC4-205ENST00000465563 INHAP05111 366 aa11.72□□□□□ -0.53
SMC4-205ENST00000465563 MX2P20592 715 aa11.72□□□□□ -0.53
SMC4-205ENST00000465563 SCNN1DP51172 638 aa11.72□□□□□ -0.53
SMC4-205ENST00000465563 GDF10P55107 478 aa11.72□□□□□ -0.53
SMC4-205ENST00000465563 ENAMQ9NRM1 1142 aa11.72□□□□□ -0.53
SMC4-205ENST00000465563 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
SMC4-205ENST00000465563 RASSF7Q02833 373 aa11.71□□□□□ -0.53
SMC4-205ENST00000465563 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
SMC4-205ENST00000465563 TMEM151AQ8N4L1 468 aa11.71□□□□□ -0.53
SMC4-205ENST00000465563 RAD21O60216 631 aa11.7□□□□□ -0.54
SMC4-205ENST00000465563 LBRQ14739 615 aaKnown RBP11.7□□□□□ -0.54
SMC4-205ENST00000465563 CFHR5Q9BXR6 569 aa11.7□□□□□ -0.54
SMC4-205ENST00000465563 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
SMC4-205ENST00000465563 GDF11O95390 407 aa11.69□□□□□ -0.54
SMC4-205ENST00000465563 THBS1P07996 1170 aa11.69□□□□□ -0.54
SMC4-205ENST00000465563 MSX1P28360 303 aa11.69□□□□□ -0.54
SMC4-205ENST00000465563 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
SMC4-205ENST00000465563 ALG2Q9H553 416 aa11.69□□□□□ -0.54
SMC4-205ENST00000465563 RUBCNLQ9H714 662 aa11.69□□□□□ -0.54
SMC4-205ENST00000465563 FLIIQ13045 1269 aa11.68□□□□□ -0.54
SMC4-205ENST00000465563 SCARF2Q96GP6 870 aaPredicted RBP11.68□□□□□ -0.54
SMC4-205ENST00000465563 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
SMC4-205ENST00000465563 BCRP11274 1271 aa11.67□□□□□ -0.54
SMC4-205ENST00000465563 SMTNP53814 917 aa11.67□□□□□ -0.54
SMC4-205ENST00000465563 EFHC2Q5JST6 749 aa11.67□□□□□ -0.54
SMC4-205ENST00000465563 SKIP12755 728 aa11.66□□□□□ -0.54
SMC4-205ENST00000465563 IRS1P35568 1242 aa11.66□□□□□ -0.54
SMC4-205ENST00000465563 PLA2G4AP47712 749 aa11.66□□□□□ -0.54
SMC4-205ENST00000465563 EML3Q32P44 896 aa11.66□□□□□ -0.54
SMC4-205ENST00000465563 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
SMC4-205ENST00000465563 ACDQ96AP0 544 aa11.66□□□□□ -0.54
SMC4-205ENST00000465563 NIFKQ9BYG3 293 aaKnown RBP11.66□□□□□ -0.54
SMC4-205ENST00000465563 LZTS3O60299 673 aaPredicted RBP11.65□□□□□ -0.54
SMC4-205ENST00000465563 MAP2K3P46734 347 aa11.65□□□□□ -0.54
SMC4-205ENST00000465563 TBC1D9Q6ZT07 1266 aa11.65□□□□□ -0.54
SMC4-205ENST00000465563 KCTD17Q8N5Z5 321 aa11.65□□□□□ -0.54
SMC4-205ENST00000465563 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
SMC4-205ENST00000465563 TMEM229AB2RXF0 380 aa11.64□□□□□ -0.55
SMC4-205ENST00000465563 UBTFP17480 764 aaKnown RBP11.64□□□□□ -0.55
SMC4-205ENST00000465563 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
SMC4-205ENST00000465563 SLC4A9Q96Q91 983 aa11.64□□□□□ -0.55
SMC4-205ENST00000465563 CRISPLD1Q9H336 500 aa11.64□□□□□ -0.55
SMC4-205ENST00000465563 LRRC4BQ9NT99 713 aa11.64□□□□□ -0.55
SMC4-205ENST00000465563 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
SMC4-205ENST00000465563 PCDHGA11Q9Y5H2 935 aa11.64□□□□□ -0.55
SMC4-205ENST00000465563 KANK3Q6NY19 840 aa11.63□□□□□ -0.55
SMC4-205ENST00000465563 NEDD1Q8NHV4 660 aa11.63□□□□□ -0.55
SMC4-205ENST00000465563 C1orf216Q8TAB5 229 aa11.62□□□□□ -0.55
SMC4-205ENST00000465563 ATXN7L1Q9ULK2 861 aaPredicted RBP11.62□□□□□ -0.55
SMC4-205ENST00000465563 A6NJY4 79 aa11.61□□□□□ -0.55
SMC4-205ENST00000465563 AIDAQ96BJ3 306 aa11.61□□□□□ -0.55
SMC4-205ENST00000465563 OXCT2Q9BYC2 517 aaPredicted RBP11.61□□□□□ -0.55
SMC4-205ENST00000465563 CDK2AP1O14519 115 aa11.6□□□□□ -0.55
SMC4-205ENST00000465563 GTF2IP78347 998 aa11.6□□□□□ -0.55
SMC4-205ENST00000465563 NCOA4Q13772 614 aa11.6□□□□□ -0.55
SMC4-205ENST00000465563 MTFR1Q15390 333 aa11.6□□□□□ -0.55
SMC4-205ENST00000465563 BACH1O14867 736 aa11.59□□□□□ -0.55
SMC4-205ENST00000465563 OIP5O43482 229 aa11.59□□□□□ -0.55
SMC4-205ENST00000465563 FIGNL1Q6PIW4 674 aa11.59□□□□□ -0.55
SMC4-205ENST00000465563 KLRG1Q96E93 195 aa11.59□□□□□ -0.55
SMC4-205ENST00000465563 ABHD17AQ96GS6 310 aa11.59□□□□□ -0.55
SMC4-205ENST00000465563 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
SMC4-205ENST00000465563 BNIP3LO60238 219 aa11.58□□□□□ -0.56
SMC4-205ENST00000465563 ATP4AP20648 1035 aa11.58□□□□□ -0.56
SMC4-205ENST00000465563 PSME1Q06323 249 aa11.58□□□□□ -0.56
SMC4-205ENST00000465563 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
SMC4-205ENST00000465563 NDFIP2Q9NV92 336 aa11.58□□□□□ -0.56
SMC4-205ENST00000465563 IQSEC3Q9UPP2 1182 aaPredicted RBP11.58□□□□□ -0.56
SMC4-205ENST00000465563 POM121CA8CG34 1229 aa11.57□□□□□ -0.56
SMC4-205ENST00000465563 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
SMC4-205ENST00000465563 PODNQ7Z5L7 613 aa11.57□□□□□ -0.56
SMC4-205ENST00000465563 NLRP8Q86W28 1048 aa11.57□□□□□ -0.56
SMC4-205ENST00000465563 ZNF295-AS1Q8N0V1 137 aa11.57□□□□□ -0.56
SMC4-205ENST00000465563 DEPDC4Q8N2C3 294 aa11.57□□□□□ -0.56
SMC4-205ENST00000465563 BEND7Q8N7W2 519 aaPredicted RBP11.57□□□□□ -0.56
SMC4-205ENST00000465563 DNMT3AQ9Y6K1 912 aaPredicted RBP11.57□□□□□ -0.56
SMC4-205ENST00000465563 BMP4P12644 408 aa11.56□□□□□ -0.56
SMC4-205ENST00000465563 FGFR3P22607 806 aa11.56□□□□□ -0.56
SMC4-205ENST00000465563 CABP1Q9NZU7 370 aa11.56□□□□□ -0.56
SMC4-205ENST00000465563 GDF2Q9UK05 429 aaPredicted RBP11.56□□□□□ -0.56
SMC4-205ENST00000465563 PCDHGC4Q9Y5F7 938 aa11.56□□□□□ -0.56
SMC4-205ENST00000465563 CNTNAP5Q8WYK1 1306 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms