RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 NPC1L1Q9UHC9 1359 aa11.93□□□□□ -0.5
GABRE-205ENST00000465405 HMOX1P09601 288 aa11.93□□□□□ -0.5
GABRE-205ENST00000465405 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
GABRE-205ENST00000465405 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
GABRE-205ENST00000465405 FHDC1Q9C0D6 1143 aaPredicted RBP11.93□□□□□ -0.5
GABRE-205ENST00000465405 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
GABRE-205ENST00000465405 C4BP0C0L5 1744 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 COL24A1Q17RW2 1714 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 LOC102724428A0A0B4J2F2 783 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 SIK1P57059 783 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 SMIM5Q71RC9 77 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 AMIGO3Q86WK7 504 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 SLC16A10Q8TF71 515 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 DCAF5Q96JK2 942 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 ARXQ96QS3 562 aa11.92□□□□□ -0.5
GABRE-205ENST00000465405 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
GABRE-205ENST00000465405 ERVV-2B6SEH9 535 aa11.91□□□□□ -0.5
GABRE-205ENST00000465405 DIAPH1O60610 1272 aaKnown RBP11.91□□□□□ -0.5
GABRE-205ENST00000465405 NPM3O75607 178 aaKnown RBP11.91□□□□□ -0.5
GABRE-205ENST00000465405 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
GABRE-205ENST00000465405 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.5
GABRE-205ENST00000465405 ITPK1Q13572 414 aa11.9□□□□□ -0.5
GABRE-205ENST00000465405 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.5
GABRE-205ENST00000465405 LINC00116Q8NCU8 138 aa11.9□□□□□ -0.5
GABRE-205ENST00000465405 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
GABRE-205ENST00000465405 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
GABRE-205ENST00000465405 CABP4P57796 275 aa11.89□□□□□ -0.51
GABRE-205ENST00000465405 MSL1Q68DK7 614 aa11.89□□□□□ -0.51
GABRE-205ENST00000465405 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
GABRE-205ENST00000465405 SCN11AQ9UI33 1791 aa11.88□□□□□ -0.51
GABRE-205ENST00000465405 PHF14O94880 888 aa11.88□□□□□ -0.51
GABRE-205ENST00000465405 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
GABRE-205ENST00000465405 AK7Q96M32 723 aa11.88□□□□□ -0.51
GABRE-205ENST00000465405 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
GABRE-205ENST00000465405 POLD1P28340 1107 aa11.87□□□□□ -0.51
GABRE-205ENST00000465405 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
GABRE-205ENST00000465405 AKAP4Q5JQC9 854 aa11.87□□□□□ -0.51
GABRE-205ENST00000465405 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
GABRE-205ENST00000465405 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
GABRE-205ENST00000465405 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
GABRE-205ENST00000465405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
GABRE-205ENST00000465405 HMGB2P26583 209 aaKnown RBP11.86□□□□□ -0.51
GABRE-205ENST00000465405 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
GABRE-205ENST00000465405 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
GABRE-205ENST00000465405 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
GABRE-205ENST00000465405 GNPATO15228 680 aa11.85□□□□□ -0.51
GABRE-205ENST00000465405 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
GABRE-205ENST00000465405 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
GABRE-205ENST00000465405 COL5A3P25940 1745 aaPredicted RBP11.85□□□□□ -0.51
GABRE-205ENST00000465405 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
GABRE-205ENST00000465405 SSFA2P28290 1259 aa11.84□□□□□ -0.51
GABRE-205ENST00000465405 NLGN2Q8NFZ4 835 aa11.84□□□□□ -0.51
GABRE-205ENST00000465405 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
GABRE-205ENST00000465405 ADAMTS7Q9UKP4 1686 aa11.84□□□□□ -0.51
GABRE-205ENST00000465405 TJP1Q07157 1748 aa11.83□□□□□ -0.52
GABRE-205ENST00000465405 MRC1P22897 1456 aa11.83□□□□□ -0.52
GABRE-205ENST00000465405 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
GABRE-205ENST00000465405 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
GABRE-205ENST00000465405 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
GABRE-205ENST00000465405 YY1P25490 414 aa11.81□□□□□ -0.52
GABRE-205ENST00000465405 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
GABRE-205ENST00000465405 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
GABRE-205ENST00000465405 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
GABRE-205ENST00000465405 RTCBQ9Y3I0 505 aaKnown RBP11.81□□□□□ -0.52
GABRE-205ENST00000465405 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
GABRE-205ENST00000465405 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
GABRE-205ENST00000465405 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
GABRE-205ENST00000465405 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
GABRE-205ENST00000465405 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
GABRE-205ENST00000465405 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
GABRE-205ENST00000465405 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
GABRE-205ENST00000465405 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
GABRE-205ENST00000465405 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
GABRE-205ENST00000465405 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
GABRE-205ENST00000465405 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.522e-7■■■■□ 24.2
GABRE-205ENST00000465405 GPR162Q16538 588 aa11.79□□□□□ -0.52
GABRE-205ENST00000465405 DNAJC10Q8IXB1 793 aa11.79□□□□□ -0.52
GABRE-205ENST00000465405 GAS2L2Q8NHY3 880 aa11.79□□□□□ -0.52
GABRE-205ENST00000465405 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
GABRE-205ENST00000465405 C4AP0C0L4 1744 aa11.79□□□□□ -0.52
GABRE-205ENST00000465405 KCPQ6ZWJ8 1503 aa11.79□□□□□ -0.52
GABRE-205ENST00000465405 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
GABRE-205ENST00000465405 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
GABRE-205ENST00000465405 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.52
GABRE-205ENST00000465405 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.52
GABRE-205ENST00000465405 CD2APQ9Y5K6 639 aa11.77□□□□□ -0.53
GABRE-205ENST00000465405 HAX1O00165 279 aa11.76□□□□□ -0.53
GABRE-205ENST00000465405 FCHSD2O94868 740 aa11.76□□□□□ -0.53
GABRE-205ENST00000465405 MMP10P09238 476 aa11.76□□□□□ -0.53
GABRE-205ENST00000465405 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
GABRE-205ENST00000465405 GYS1P13807 737 aa11.76□□□□□ -0.53
GABRE-205ENST00000465405 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
GABRE-205ENST00000465405 RFC4P35249 363 aa11.76□□□□□ -0.53
GABRE-205ENST00000465405 TEFQ10587 303 aa11.76□□□□□ -0.53
GABRE-205ENST00000465405 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
GABRE-205ENST00000465405 SRP68Q9UHB9 627 aaKnown RBP11.76□□□□□ -0.53
GABRE-205ENST00000465405 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
GABRE-205ENST00000465405 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
GABRE-205ENST00000465405 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
GABRE-205ENST00000465405 UTRNP46939 3433 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms