RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 CCDC155Q8N6L0 562 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 FAM8A1Q9UBU6 413 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 CARD11Q9BXL7 1154 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 RASSF2P50749 326 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 FBLN2P98095 1184 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 RAD50Q92878 1312 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 DTNBO60941 627 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 CEP63Q96MT8 703 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 PPFIA1Q13136 1202 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 SLF2Q8IX21 1173 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 PPP1R12CQ9BZL4 782 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 ZFYP08048 801 aaPredicted RBP8.63□□□□□ -1.03
PBX1-204ENST00000465089 MAP3K7CLP57077 242 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 SRCIN1Q9C0H9 1055 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 PNMA2Q9UL42 364 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 SNAPC4Q5SXM2 1469 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.63□□□□□ -1.03
PBX1-204ENST00000465089 TACC1O75410 805 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 GMNNO75496 209 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 RPGRIP1LQ68CZ1 1315 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 KINO60870 393 aaKnown RBP8.63□□□□□ -1.03
PBX1-204ENST00000465089 VCX3BQ9H321 246 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 F8W8V4 182 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 CACYBPQ9HB71 228 aaKnown RBP8.63□□□□□ -1.03
PBX1-204ENST00000465089 THEGQ9P2T0 379 aa8.63□□□□□ -1.03
PBX1-204ENST00000465089 MVPQ14764 893 aaKnown RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 ZNF771Q7L3S4 317 aaPredicted RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 BZW2Q9Y6E2 419 aaKnown RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 PSMA3P25788 255 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 HSPA5P11021 654 aaKnown RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 TRHP20396 242 aaPredicted RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 HVCN1Q96D96 273 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 DHX57Q6P158 1386 aaKnown RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 RALYLQ86SE5 291 aaKnown RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 CDCA7LQ96GN5 454 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 PLCB1Q9NQ66 1216 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 CALCOCO1Q9P1Z2 691 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 U3KPZ7 1027 aaPredicted RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 EFCAB14O75071 495 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 TEKT2Q9UIF3 430 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 ACTN2P35609 894 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 TRPC3Q13507 836 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 MCM6Q14566 821 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 NOLC1Q14978 699 aaKnown RBP eCLIP8.62□□□□□ -1.03
PBX1-204ENST00000465089 BICDL1Q6ZP65 573 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 RNF168Q8IYW5 571 aaPredicted RBP8.62□□□□□ -1.03
PBX1-204ENST00000465089 PAF1Q8N7H5 531 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 CUL7Q14999 1698 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 GOLGA8TH3BQL2 631 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 GOLGA8HP0CJ92 632 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 CCDC178Q5BJE1 867 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 CCDC181Q5TID7 509 aa8.62□□□□□ -1.03
PBX1-204ENST00000465089 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
PBX1-204ENST00000465089 GDAP1L1Q96MZ0 367 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 VCX3AQ9NNX9 186 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 KRT32Q14532 448 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 CCDC141Q6ZP82 1450 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 MCTP2Q6DN12 878 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 UBXN4Q92575 508 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 CCDC84Q86UT8 332 aaPredicted RBP8.61□□□□□ -1.03
PBX1-204ENST00000465089 PPP2R5EQ16537 467 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 SRGAP1Q7Z6B7 1085 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 NACAP1Q9BZK3 213 aa8.61□□□□□ -1.03
PBX1-204ENST00000465089 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 GPRASP1Q5JY77 1395 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 RNF216Q9NWF9 866 aaPredicted RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 KANK3Q6NY19 840 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 H7C0S8 307 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 SF3B2Q13435 895 aaKnown RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 TTC5Q8N0Z6 440 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 TSC1Q92574 1164 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 GFM2Q969S9 779 aaKnown RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 CACNA2D3Q8IZS8 1091 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 FRAT2O75474 233 aaPredicted RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 RNF8O76064 485 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 LIG1P18858 919 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 DEUP1Q05D60 604 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 CCDC144CPQ8IYA2 1237 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 SLKQ9H2G2 1235 aaPredicted RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 ANGPTL3Q9Y5C1 460 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 BIN1O00499 593 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 BMS1Q14692 1282 aaKnown RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 SOGA1O94964 1423 aa8.6□□□□□ -1.03
PBX1-204ENST00000465089 COPG1Q9Y678 874 aaKnown RBP8.6□□□□□ -1.03
PBX1-204ENST00000465089 PAX3P23760 479 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.59□□□□□ -1.03
PBX1-204ENST00000465089 PRKRIP1Q9H875 184 aaPredicted RBP8.59□□□□□ -1.03
PBX1-204ENST00000465089 GAS8O95995 478 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 TUBB2AQ13885 445 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 CFAP100Q494V2 611 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 NLRP13Q86W25 1043 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 TUBB2BQ9BVA1 445 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 GOLGA8JA6NMD2 632 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 C22orf23Q9BZE7 217 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 ARHGAP24Q8N264 748 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 FYCO1Q9BQS8 1478 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 PPP1R2P3Q6NXS1 205 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms