RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
RPP40-203ENST00000464646 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
RPP40-203ENST00000464646 LINC00116Q8NCU8 138 aa18.79■□□□□ 0.6
RPP40-203ENST00000464646 MTHFSP49914 203 aa18.78■□□□□ 0.6
RPP40-203ENST00000464646 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
RPP40-203ENST00000464646 DCAF5Q96JK2 942 aa18.77■□□□□ 0.6
RPP40-203ENST00000464646 ITPK1Q13572 414 aa18.76■□□□□ 0.59
RPP40-203ENST00000464646 ZNF784Q8NCA9 323 aaPredicted RBP18.76■□□□□ 0.59
RPP40-203ENST00000464646 WWC3Q9ULE0 1092 aa18.76■□□□□ 0.59
RPP40-203ENST00000464646 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
RPP40-203ENST00000464646 SSFA2P28290 1259 aa18.75■□□□□ 0.59
RPP40-203ENST00000464646 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
RPP40-203ENST00000464646 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
RPP40-203ENST00000464646 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
RPP40-203ENST00000464646 PTCD1O75127 700 aaKnown RBP18.73■□□□□ 0.59
RPP40-203ENST00000464646 HMOX1P09601 288 aa18.73■□□□□ 0.59
RPP40-203ENST00000464646 RTCBQ9Y3I0 505 aaKnown RBP18.73■□□□□ 0.59
RPP40-203ENST00000464646 GRIN3BO60391 1043 aa18.72■□□□□ 0.59
RPP40-203ENST00000464646 IL13P35225 146 aa18.72■□□□□ 0.59
RPP40-203ENST00000464646 AMER1Q5JTC6 1135 aaPredicted RBP18.72■□□□□ 0.59
RPP40-203ENST00000464646 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.59
RPP40-203ENST00000464646 NFATC2IPQ8NCF5 419 aa18.71■□□□□ 0.59
RPP40-203ENST00000464646 YBX3P16989 372 aaKnown RBP eCLIP18.7■□□□□ 0.58
RPP40-203ENST00000464646 CD2APQ9Y5K6 639 aa18.7■□□□□ 0.58
RPP40-203ENST00000464646 DIAPH1O60610 1272 aaKnown RBP18.69■□□□□ 0.58
RPP40-203ENST00000464646 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
RPP40-203ENST00000464646 KDM6AO15550 1401 aaPredicted RBP18.68■□□□□ 0.58
RPP40-203ENST00000464646 RFC4P35249 363 aa18.68■□□□□ 0.58
RPP40-203ENST00000464646 U2SURPO15042 1029 aaKnown RBP18.67■□□□□ 0.58
RPP40-203ENST00000464646 MMP10P09238 476 aa18.66■□□□□ 0.58
RPP40-203ENST00000464646 AKAP4Q5JQC9 854 aa18.66■□□□□ 0.58
RPP40-203ENST00000464646 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
RPP40-203ENST00000464646 ARHGEF1Q92888 912 aaKnown RBP18.65■□□□□ 0.58
RPP40-203ENST00000464646 KDRP35968 1356 aa18.64■□□□□ 0.57
RPP40-203ENST00000464646 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
RPP40-203ENST00000464646 RPS6KA4O75676 772 aa18.63■□□□□ 0.57
RPP40-203ENST00000464646 RC3H1Q5TC82 1133 aaKnown RBP18.63■□□□□ 0.57
RPP40-203ENST00000464646 NLGN1Q8N2Q7 840 aa18.63■□□□□ 0.57
RPP40-203ENST00000464646 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
RPP40-203ENST00000464646 LGR6Q9HBX8 967 aa18.63■□□□□ 0.57
RPP40-203ENST00000464646 RNMTO43148 476 aaKnown RBP18.62■□□□□ 0.57
RPP40-203ENST00000464646 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
RPP40-203ENST00000464646 PARP3Q9Y6F1 533 aa18.62■□□□□ 0.57
RPP40-203ENST00000464646 CNTNAP4Q9C0A0 1308 aa18.62■□□□□ 0.57
RPP40-203ENST00000464646 SCN11AQ9UI33 1791 aa18.62■□□□□ 0.57
RPP40-203ENST00000464646 GIGYF1O75420 1035 aaPredicted RBP18.61■□□□□ 0.57
RPP40-203ENST00000464646 ADRA2BP18089 450 aa18.61■□□□□ 0.57
RPP40-203ENST00000464646 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
RPP40-203ENST00000464646 MTHFSDQ2M296 383 aaKnown RBP18.61■□□□□ 0.57
RPP40-203ENST00000464646 SLC52A2Q9HAB3 445 aa18.61■□□□□ 0.57
RPP40-203ENST00000464646 CCDC87Q9NVE4 849 aa18.6■□□□□ 0.57
RPP40-203ENST00000464646 VIRMAQ69YN4 1812 aaKnown RBP18.6■□□□□ 0.57
RPP40-203ENST00000464646 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
RPP40-203ENST00000464646 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
RPP40-203ENST00000464646 CFAP53Q96M91 514 aa18.59■□□□□ 0.57
RPP40-203ENST00000464646 COL5A3P25940 1745 aaPredicted RBP18.59■□□□□ 0.57
RPP40-203ENST00000464646 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
RPP40-203ENST00000464646 DNAJC10Q8IXB1 793 aa18.58■□□□□ 0.56
RPP40-203ENST00000464646 SRP68Q9UHB9 627 aaKnown RBP18.58■□□□□ 0.56
RPP40-203ENST00000464646 BCS1LQ9Y276 419 aa18.58■□□□□ 0.56
RPP40-203ENST00000464646 CICQ96RK0 1608 aaPredicted RBP18.58■□□□□ 0.56
RPP40-203ENST00000464646 ZPR1O75312 459 aa18.57■□□□□ 0.56
RPP40-203ENST00000464646 GYS1P13807 737 aa18.57■□□□□ 0.56
RPP40-203ENST00000464646 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
RPP40-203ENST00000464646 A0A0G2JLW4 131 aa18.56■□□□□ 0.56
RPP40-203ENST00000464646 C1QTNF8P60827 252 aa18.56■□□□□ 0.56
RPP40-203ENST00000464646 TEFQ10587 303 aa18.56■□□□□ 0.56
RPP40-203ENST00000464646 ZNF831Q5JPB2 1677 aa18.56■□□□□ 0.56
RPP40-203ENST00000464646 N4BP2Q86UW6 1770 aaPredicted RBP18.55■□□□□ 0.56
RPP40-203ENST00000464646 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
RPP40-203ENST00000464646 GPBP1L1Q9HC44 474 aaPredicted RBP18.54■□□□□ 0.56
RPP40-203ENST00000464646 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
RPP40-203ENST00000464646 C4AP0C0L4 1744 aa18.54■□□□□ 0.56
RPP40-203ENST00000464646 FCHSD2O94868 740 aa18.53■□□□□ 0.56
RPP40-203ENST00000464646 TGFB2P61812 414 aa18.53■□□□□ 0.56
RPP40-203ENST00000464646 TJP1Q07157 1748 aa18.53■□□□□ 0.56
RPP40-203ENST00000464646 FKBP8Q14318 412 aa18.53■□□□□ 0.56
RPP40-203ENST00000464646 ATP10DQ9P241 1426 aa18.53■□□□□ 0.56
RPP40-203ENST00000464646 ZNF330Q9Y3S2 320 aaPredicted RBP18.53■□□□□ 0.56
RPP40-203ENST00000464646 GNAT3A8MTJ3 354 aa18.52■□□□□ 0.56
RPP40-203ENST00000464646 DPEP1P16444 411 aa18.52■□□□□ 0.56
RPP40-203ENST00000464646 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.56
RPP40-203ENST00000464646 USPL1Q5W0Q7 1092 aa18.52■□□□□ 0.56
RPP40-203ENST00000464646 INTS5Q6P9B9 1019 aaKnown RBP18.52■□□□□ 0.56
RPP40-203ENST00000464646 ARHGAP27Q6ZUM4 889 aa18.52■□□□□ 0.56
RPP40-203ENST00000464646 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
RPP40-203ENST00000464646 USP42Q9H9J4 1324 aaKnown RBP18.51■□□□□ 0.55
RPP40-203ENST00000464646 UTRNP46939 3433 aa18.51■□□□□ 0.55
RPP40-203ENST00000464646 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
RPP40-203ENST00000464646 PRKAR2BP31323 418 aa18.5■□□□□ 0.55
RPP40-203ENST00000464646 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
RPP40-203ENST00000464646 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
RPP40-203ENST00000464646 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
RPP40-203ENST00000464646 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
RPP40-203ENST00000464646 ZBTB1Q9Y2K1 713 aa18.49■□□□□ 0.55
RPP40-203ENST00000464646 STARD3NLO95772 234 aa18.48■□□□□ 0.55
RPP40-203ENST00000464646 C10orf71Q711Q0 1435 aa18.48■□□□□ 0.55
RPP40-203ENST00000464646 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
RPP40-203ENST00000464646 COL15A1P39059 1388 aa18.47■□□□□ 0.55
RPP40-203ENST00000464646 BICDL1Q6ZP65 573 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms