RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 PTPRTO14522 1441 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 ESPNB1AK53 854 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 BCAR3O75815 825 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 HS1BP3Q53T59 392 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 ZKSCAN2Q63HK3 967 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 WWC1Q8IX03 1113 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 FTSJ3Q8IY81 847 aaKnown RBP8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 PUS7Q96PZ0 661 aaKnown RBP8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 RRAGDQ9NQL2 400 aaPredicted RBP8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 DDX19BQ9UMR2 479 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 ARAP3Q8WWN8 1544 aa8.98□□□□□ -0.97
CLSTN1-204ENST00000464286 KIF1BO60333 1816 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 IPO8O15397 1037 aaKnown RBP8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 RARSP54136 660 aaKnown RBP8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 MVPQ14764 893 aaKnown RBP8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 PDCL3Q9H2J4 239 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 PDZRN3Q9UPQ7 1066 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 COG6Q9Y2V7 657 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 SETBP1Q9Y6X0 1596 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 DEPDC5O75140 1603 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 ABCC11Q96J66 1382 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
CLSTN1-204ENST00000464286 MAP3K4Q9Y6R4 1608 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 TLL1O43897 1013 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 EFCAB2Q5VUJ9 269 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 SKAP1Q86WV1 359 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 SMC5Q8IY18 1101 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 ZNF428Q96B54 188 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 TMUB1Q9BVT8 246 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 IQSEC2Q5JU85 1478 aa8.96□□□□□ -0.98
CLSTN1-204ENST00000464286 HSP90AB1P08238 724 aaKnown RBP8.95□□□□□ -0.98
CLSTN1-204ENST00000464286 RBM25P49756 843 aaKnown RBP8.95□□□□□ -0.98
CLSTN1-204ENST00000464286 CCDC146Q8IYE0 955 aa8.95□□□□□ -0.98
CLSTN1-204ENST00000464286 DZIP1LQ8IYY4 767 aaKnown RBP8.95□□□□□ -0.98
CLSTN1-204ENST00000464286 PANK1Q8TE04 598 aa8.95□□□□□ -0.98
CLSTN1-204ENST00000464286 IL16Q14005 1332 aa8.95□□□□□ -0.98
CLSTN1-204ENST00000464286 IRF6O14896 467 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 MSNP26038 577 aaKnown RBP8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 MCM5P33992 734 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 GGCXP38435 758 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 CSPP1Q1MSJ5 1256 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 PUS10Q3MIT2 529 aaKnown RBP8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 MORC1Q86VD1 984 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 RDH13Q8NBN7 331 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 ABCC1P33527 1531 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 SHPRHQ149N8 1683 aa8.94□□□□□ -0.98
CLSTN1-204ENST00000464286 NR1I2O75469 434 aa8.93□□□□□ -0.98
CLSTN1-204ENST00000464286 SCUBE3Q8IX30 993 aa8.93□□□□□ -0.98
CLSTN1-204ENST00000464286 V9GY48 417 aaPredicted RBP8.93□□□□□ -0.98
CLSTN1-204ENST00000464286 PLCH2O75038 1416 aa8.93□□□□□ -0.98
CLSTN1-204ENST00000464286 ERVK-7P63135 1459 aa8.93□□□□□ -0.98
CLSTN1-204ENST00000464286 CLTCL1P53675 1640 aa8.93□□□□□ -0.98
CLSTN1-204ENST00000464286 IFT172Q9UG01 1749 aa8.92□□□□□ -0.98
CLSTN1-204ENST00000464286 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
CLSTN1-204ENST00000464286 NUCB2P80303 420 aa8.92□□□□□ -0.98
CLSTN1-204ENST00000464286 ZSCAN30Q86W11 494 aa8.92□□□□□ -0.98
CLSTN1-204ENST00000464286 PPP1R9BQ96SB3 815 aa8.92□□□□□ -0.98
CLSTN1-204ENST00000464286 RIMBP3CA6NJZ7 1639 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 RIMBP3BA6NNM3 1639 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 RIMBP3Q9UFD9 1639 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 ADGRB2O60241 1585 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 YEATS2Q9ULM3 1422 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 RNF223E7ERA6 249 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 GCGRP47871 477 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 MFAP1P55081 439 aaKnown RBP8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 CALD1Q05682 793 aaKnown RBP8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 CLEC17AQ6ZS10 378 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 GCC1Q96CN9 775 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 PCDHB15Q9Y5E8 787 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 ABCA6Q8N139 1617 aa8.91□□□□□ -0.98
CLSTN1-204ENST00000464286 VWDEQ8N2E2 1590 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 ZNF518AQ6AHZ1 1483 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 S1PR4O95977 384 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 ADH1BP00325 375 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 FUT2Q10981 343 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 BMP2KLQ5H9B9 411 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 ILDR2Q71H61 639 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 TCP11L2Q8N4U5 519 aa8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 GZF1Q9H116 711 aaPredicted RBP8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 ZC3H13Q5T200 1668 aaKnown RBP8.9□□□□□ -0.98
CLSTN1-204ENST00000464286 CFAP74Q9C0B2 1584 aa8.9□□□□□ -0.99
CLSTN1-204ENST00000464286 FANCAO15360 1455 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 NRXN1Q9ULB1 1477 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 ARHGAP31Q2M1Z3 1444 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 SPAG9O60271 1321 aaKnown RBP8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 PPEF1O14829 653 aaPredicted RBP8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 OFD1O75665 1012 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 DDIT3P35638 169 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 NASPP49321 788 aaPredicted RBP8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 KLHL40Q2TBA0 621 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 ALDH1L2Q3SY69 923 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 MORN1Q5T089 497 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms