RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 CLUAP1Q96AJ1 413 aa24.31■■□□□ 1.48
CCDC78-206ENST00000463539 TNNQ9UQP3 1299 aa24.31■■□□□ 1.48
CCDC78-206ENST00000463539 SLIT2O94813 1529 aa24.31■■□□□ 1.48
CCDC78-206ENST00000463539 RLBP1P12271 317 aa24.31■■□□□ 1.48
CCDC78-206ENST00000463539 DZIP1LQ8IYY4 767 aaKnown RBP24.31■■□□□ 1.48
CCDC78-206ENST00000463539 SLC52A2Q9HAB3 445 aa24.31■■□□□ 1.48
CCDC78-206ENST00000463539 NRAPQ86VF7 1730 aa24.3■■□□□ 1.48
CCDC78-206ENST00000463539 COG6Q9Y2V7 657 aa24.3■■□□□ 1.48
CCDC78-206ENST00000463539 DISP2A7MBM2 1401 aa24.3■■□□□ 1.48
CCDC78-206ENST00000463539 HSPA1LP34931 641 aa24.29■■□□□ 1.48
CCDC78-206ENST00000463539 KDM3BQ7LBC6 1761 aa24.29■■□□□ 1.48
CCDC78-206ENST00000463539 EIF4A1P60842 406 aaKnown RBP24.28■■□□□ 1.48
CCDC78-206ENST00000463539 MRC1P22897 1456 aa24.28■■□□□ 1.48
CCDC78-206ENST00000463539 DDX54Q8TDD1 881 aaKnown RBP24.28■■□□□ 1.48
CCDC78-206ENST00000463539 ARHGAP45Q92619 1136 aa24.28■■□□□ 1.48
CCDC78-206ENST00000463539 C8orf37Q96NL8 207 aa24.27■■□□□ 1.48
CCDC78-206ENST00000463539 NWD2Q9ULI1 1742 aa24.27■■□□□ 1.48
CCDC78-206ENST00000463539 SCN11AQ9UI33 1791 aa24.27■■□□□ 1.48
CCDC78-206ENST00000463539 KCNQ3O43525 872 aa24.26■■□□□ 1.47
CCDC78-206ENST00000463539 NFATC2IPQ8NCF5 419 aa24.26■■□□□ 1.47
CCDC78-206ENST00000463539 SPATA31A1Q5TZJ5 1347 aa24.26■■□□□ 1.47
CCDC78-206ENST00000463539 NKX1-1Q15270 411 aaPredicted RBP24.26■■□□□ 1.47
CCDC78-206ENST00000463539 SIPA1L3O60292 1781 aaPredicted RBP24.25■■□□□ 1.47
CCDC78-206ENST00000463539 HOXB7P09629 217 aa24.25■■□□□ 1.47
CCDC78-206ENST00000463539 NGLY1Q96IV0 654 aa24.25■■□□□ 1.47
CCDC78-206ENST00000463539 THRAP3Q9Y2W1 955 aaKnown RBP24.25■■□□□ 1.47
CCDC78-206ENST00000463539 VIRMAQ69YN4 1812 aaKnown RBP24.25■■□□□ 1.47
CCDC78-206ENST00000463539 CABP4P57796 275 aa24.24■■□□□ 1.47
CCDC78-206ENST00000463539 MVPQ14764 893 aaKnown RBP24.24■■□□□ 1.47
CCDC78-206ENST00000463539 CCDC30Q5VVM6 783 aa24.24■■□□□ 1.47
CCDC78-206ENST00000463539 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
CCDC78-206ENST00000463539 STK31Q9BXU1 1019 aa24.24■■□□□ 1.47
CCDC78-206ENST00000463539 LRP6O75581 1613 aa24.23■■□□□ 1.47
CCDC78-206ENST00000463539 SLC4A2P04920 1241 aa24.23■■□□□ 1.47
CCDC78-206ENST00000463539 SPATA31A5Q5VU36 1347 aa24.23■■□□□ 1.47
CCDC78-206ENST00000463539 UNC5CLQ8IV45 518 aa24.23■■□□□ 1.47
CCDC78-206ENST00000463539 SPATA31A7Q8IWB4 1347 aa24.23■■□□□ 1.47
CCDC78-206ENST00000463539 SHANK3Q9BYB0 1731 aa24.23■■□□□ 1.47
CCDC78-206ENST00000463539 API5Q9BZZ5 524 aaKnown RBP24.23■■□□□ 1.47
CCDC78-206ENST00000463539 HDGFL1Q5TGJ6 251 aa24.22■■□□□ 1.47
CCDC78-206ENST00000463539 ZNF790Q6PG37 636 aa24.22■■□□□ 1.47
CCDC78-206ENST00000463539 CHMP4AQ9BY43 222 aa24.22■■□□□ 1.47
CCDC78-206ENST00000463539 CCDC9Q9Y3X0 531 aaKnown RBP24.22■■□□□ 1.47
CCDC78-206ENST00000463539 ERVV-2B6SEH9 535 aa24.21■■□□□ 1.47
CCDC78-206ENST00000463539 AAMPQ13685 434 aa24.21■■□□□ 1.47
CCDC78-206ENST00000463539 ITPRIPQ8IWB1 547 aa24.21■■□□□ 1.47
CCDC78-206ENST00000463539 PELP1Q8IZL8 1130 aaKnown RBP24.21■■□□□ 1.47
CCDC78-206ENST00000463539 PTPRCP08575 1304 aa24.2■■□□□ 1.46
CCDC78-206ENST00000463539 TMEM57Q8N5G2 664 aa24.2■■□□□ 1.46
CCDC78-206ENST00000463539 HEG1Q9ULI3 1381 aa24.2■■□□□ 1.46
CCDC78-206ENST00000463539 EXOC5O00471 708 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 SLC39A6Q13433 755 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 NECTIN2Q92692 538 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 TNS2Q63HR2 1409 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 ABCC4O15439 1325 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 TTC5Q8N0Z6 440 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 FNBP4Q8N3X1 1017 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-206ENST00000463539 DDX19BQ9UMR2 479 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 BCL9LQ86UU0 1499 aa24.19■■□□□ 1.46
CCDC78-206ENST00000463539 WNK3Q9BYP7 1800 aa24.17■■□□□ 1.46
CCDC78-206ENST00000463539 GIGYF1O75420 1035 aaPredicted RBP24.17■■□□□ 1.46
CCDC78-206ENST00000463539 EIF2S2P20042 333 aaKnown RBP24.17■■□□□ 1.46
CCDC78-206ENST00000463539 MEX3CQ5U5Q3 659 aaKnown RBP24.17■■□□□ 1.46
CCDC78-206ENST00000463539 BARGINQ6ZT62 677 aa24.17■■□□□ 1.46
CCDC78-206ENST00000463539 VPS72Q15906 364 aa24.16■■□□□ 1.46
CCDC78-206ENST00000463539 DDB1Q16531 1140 aa24.14■■□□□ 1.46
CCDC78-206ENST00000463539 RGS12O14924 1447 aa24.14■■□□□ 1.46
CCDC78-206ENST00000463539 G2E3Q7L622 706 aa24.14■■□□□ 1.45
CCDC78-206ENST00000463539 USP21Q9UK80 565 aa24.14■■□□□ 1.45
CCDC78-206ENST00000463539 ZNF496Q96IT1 587 aaPredicted RBP24.13■■□□□ 1.45
CCDC78-206ENST00000463539 FMNL2Q96PY5 1086 aa24.13■■□□□ 1.45
CCDC78-206ENST00000463539 FLIIQ13045 1269 aa24.12■■□□□ 1.45
CCDC78-206ENST00000463539 TMOD3Q9NYL9 352 aa24.12■■□□□ 1.45
CCDC78-206ENST00000463539 CHPF2Q9P2E5 772 aa24.12■■□□□ 1.45
CCDC78-206ENST00000463539 PRAMEF22A3QJZ6 481 aa24.1■■□□□ 1.45
CCDC78-206ENST00000463539 TOGARAM1Q9Y4F4 1720 aa24.1■■□□□ 1.45
CCDC78-206ENST00000463539 FKBP5Q13451 457 aaPredicted RBP24.1■■□□□ 1.45
CCDC78-206ENST00000463539 CHMP4BQ9H444 224 aaKnown RBP24.1■■□□□ 1.45
CCDC78-206ENST00000463539 DBF4Q9UBU7 674 aaPredicted RBP24.1■■□□□ 1.45
CCDC78-206ENST00000463539 SNRPA1P09661 255 aaKnown RBP24.09■■□□□ 1.45
CCDC78-206ENST00000463539 FAM98CQ17RN3 349 aaKnown RBP24.08■■□□□ 1.45
CCDC78-206ENST00000463539 INTS3Q68E01 1043 aaKnown RBP24.08■■□□□ 1.45
CCDC78-206ENST00000463539 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.07■■□□□ 1.44
CCDC78-206ENST00000463539 CENPQQ7L2Z9 268 aaPredicted RBP24.07■■□□□ 1.44
CCDC78-206ENST00000463539 ZBTB40Q9NUA8 1239 aa24.07■■□□□ 1.44
CCDC78-206ENST00000463539 KDM2BQ8NHM5 1336 aa24.07■■□□□ 1.44
CCDC78-206ENST00000463539 PHAXQ9H814 394 aaKnown RBP24.05■■□□□ 1.44
CCDC78-206ENST00000463539 PCDHB15Q9Y5E8 787 aa24.05■■□□□ 1.44
CCDC78-206ENST00000463539 AFF2P51816 1311 aa24.05■■□□□ 1.44
CCDC78-206ENST00000463539 PAPPAQ13219 1627 aa24.05■■□□□ 1.44
CCDC78-206ENST00000463539 F6X3S4 739 aa24.05■■□□□ 1.44
CCDC78-206ENST00000463539 ZBTB7BO15156 539 aaPredicted RBP24.05■■□□□ 1.44
CCDC78-206ENST00000463539 PIGBQ92521 554 aa24.05■■□□□ 1.44
CCDC78-206ENST00000463539 KCPQ6ZWJ8 1503 aa24.04■■□□□ 1.44
CCDC78-206ENST00000463539 ANXA1P04083 346 aa24.03■■□□□ 1.44
CCDC78-206ENST00000463539 CCT4P50991 539 aaKnown RBP24.03■■□□□ 1.44
CCDC78-206ENST00000463539 SLC4A10Q6U841 1118 aa24.03■■□□□ 1.44
CCDC78-206ENST00000463539 MARCH10Q8NA82 808 aaPredicted RBP24.03■■□□□ 1.44
CCDC78-206ENST00000463539 C5P01031 1676 aa24.03■■□□□ 1.44
CCDC78-206ENST00000463539 GLI3P10071 1580 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms