RNA–Protein interactions for RNA: ENST00000463533.1

ANKRD28-208, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-208ENST00000463533 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
ANKRD28-208ENST00000463533 BTG4Q9NY30 223 aa11.37□□□□□ -0.59
ANKRD28-208ENST00000463533 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
ANKRD28-208ENST00000463533 ERBB3P21860 1342 aa11.36□□□□□ -0.59
ANKRD28-208ENST00000463533 AFF2P51816 1311 aa11.36□□□□□ -0.59
ANKRD28-208ENST00000463533 RGPD2P0DJD1 1756 aa11.36□□□□□ -0.59
ANKRD28-208ENST00000463533 HSP90AB2PQ58FF8 381 aa11.36□□□□□ -0.59
ANKRD28-208ENST00000463533 KHSRPQ92945 711 aaKnown RBP eCLIP11.36□□□□□ -0.59
ANKRD28-208ENST00000463533 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
ANKRD28-208ENST00000463533 SLIT2O94813 1529 aa11.35□□□□□ -0.59
ANKRD28-208ENST00000463533 NRAPQ86VF7 1730 aa11.35□□□□□ -0.59
ANKRD28-208ENST00000463533 EVA1CP58658 441 aa11.35□□□□□ -0.59
ANKRD28-208ENST00000463533 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
ANKRD28-208ENST00000463533 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
ANKRD28-208ENST00000463533 FLT4P35916 1363 aa11.34□□□□□ -0.59
ANKRD28-208ENST00000463533 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
ANKRD28-208ENST00000463533 USP21Q9UK80 565 aa11.34□□□□□ -0.59
ANKRD28-208ENST00000463533 SMG6Q86US8 1419 aaKnown RBP11.34□□□□□ -0.59
ANKRD28-208ENST00000463533 MYBBP1AQ9BQG0 1328 aaKnown RBP11.34□□□□□ -0.59
ANKRD28-208ENST00000463533 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 TBC1D12O60347 775 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 UNC5CLQ8IV45 518 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 ABCC6O95255 1503 aa11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
ANKRD28-208ENST00000463533 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
ANKRD28-208ENST00000463533 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
ANKRD28-208ENST00000463533 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
ANKRD28-208ENST00000463533 INSRP06213 1382 aa11.32□□□□□ -0.6
ANKRD28-208ENST00000463533 KIF24Q5T7B8 1368 aa11.32□□□□□ -0.6
ANKRD28-208ENST00000463533 NUDT7P0C024 238 aa11.32□□□□□ -0.6
ANKRD28-208ENST00000463533 LARP1Q6PKG0 1096 aaKnown RBP11.32□□□□□ -0.6
ANKRD28-208ENST00000463533 EIF4A2Q14240 407 aaKnown RBP11.31□□□□□ -0.6
ANKRD28-208ENST00000463533 TOM1L2Q6ZVM7 507 aa11.31□□□□□ -0.6
ANKRD28-208ENST00000463533 RGS17Q9UGC6 210 aaPredicted RBP11.31□□□□□ -0.6
ANKRD28-208ENST00000463533 CCDC9Q9Y3X0 531 aaKnown RBP11.31□□□□□ -0.6
ANKRD28-208ENST00000463533 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 VARS2Q5ST30 1063 aaKnown RBP11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 ZNF772Q68DY9 489 aaPredicted RBP11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 CFAP53Q96M91 514 aa11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 NLRP2Q9NX02 1062 aa11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
ANKRD28-208ENST00000463533 DIAPH1O60610 1272 aaKnown RBP11.29□□□□□ -0.6
ANKRD28-208ENST00000463533 IL13P35225 146 aa11.29□□□□□ -0.6
ANKRD28-208ENST00000463533 VPS72Q15906 364 aa11.29□□□□□ -0.6
ANKRD28-208ENST00000463533 NBPF6Q5VWK0 638 aa11.29□□□□□ -0.6
ANKRD28-208ENST00000463533 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
ANKRD28-208ENST00000463533 NBPF4Q96M43 638 aa11.29□□□□□ -0.6
ANKRD28-208ENST00000463533 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
ANKRD28-208ENST00000463533 ATRNO75882 1429 aa11.28□□□□□ -0.6
ANKRD28-208ENST00000463533 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
ANKRD28-208ENST00000463533 EYA1Q99502 592 aa11.28□□□□□ -0.6
ANKRD28-208ENST00000463533 TRPC5Q9UL62 973 aaPredicted RBP11.28□□□□□ -0.6
ANKRD28-208ENST00000463533 SPATA31A5Q5VU36 1347 aa11.28□□□□□ -0.6
ANKRD28-208ENST00000463533 SPATA31A7Q8IWB4 1347 aa11.28□□□□□ -0.6
ANKRD28-208ENST00000463533 CRB1P82279 1406 aa11.27□□□□□ -0.6
ANKRD28-208ENST00000463533 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.61
ANKRD28-208ENST00000463533 POTEAQ6S8J7 498 aa11.27□□□□□ -0.61
ANKRD28-208ENST00000463533 CARD10Q9BWT7 1032 aa11.27□□□□□ -0.61
ANKRD28-208ENST00000463533 SPATA31A1Q5TZJ5 1347 aa11.27□□□□□ -0.61
ANKRD28-208ENST00000463533 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
ANKRD28-208ENST00000463533 WNK3Q9BYP7 1800 aa11.26□□□□□ -0.61
ANKRD28-208ENST00000463533 GLI3P10071 1580 aa11.26□□□□□ -0.61
ANKRD28-208ENST00000463533 GJD4Q96KN9 370 aaPredicted RBP11.26□□□□□ -0.61
ANKRD28-208ENST00000463533 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
ANKRD28-208ENST00000463533 TCP11L2Q8N4U5 519 aa11.25□□□□□ -0.61
ANKRD28-208ENST00000463533 MRS2Q9HD23 443 aa11.25□□□□□ -0.61
ANKRD28-208ENST00000463533 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
ANKRD28-208ENST00000463533 HMOX1P09601 288 aa11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 RXRBP28702 533 aa11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 IGSF1Q8N6C5 1336 aa11.24□□□□□ -0.61
ANKRD28-208ENST00000463533 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
ANKRD28-208ENST00000463533 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
ANKRD28-208ENST00000463533 NCAPD2Q15021 1401 aa11.22□□□□□ -0.61
ANKRD28-208ENST00000463533 BRWD3Q6RI45 1802 aa11.22□□□□□ -0.61
ANKRD28-208ENST00000463533 BARGINQ6ZT62 677 aa11.22□□□□□ -0.61
ANKRD28-208ENST00000463533 THRAP3Q9Y2W1 955 aaKnown RBP11.22□□□□□ -0.61
ANKRD28-208ENST00000463533 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 A0A0G2JS52 829 aa11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 CCER2I3L3R5 266 aa11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 IL2RBP14784 551 aa11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 MYT1Q01538 1121 aa11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
ANKRD28-208ENST00000463533 MEGF6O75095 1541 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms