RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
SSR3-202ENST00000463503 INSRP06213 1382 aa15.62■□□□□ 0.09
SSR3-202ENST00000463503 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
SSR3-202ENST00000463503 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
SSR3-202ENST00000463503 ADAMTS7Q9UKP4 1686 aa15.61■□□□□ 0.09
SSR3-202ENST00000463503 MMP10P09238 476 aa15.61■□□□□ 0.09
SSR3-202ENST00000463503 TATP17735 454 aaPredicted RBP15.61■□□□□ 0.09
SSR3-202ENST00000463503 PIGBQ92521 554 aa15.61■□□□□ 0.09
SSR3-202ENST00000463503 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
SSR3-202ENST00000463503 KDRP35968 1356 aa15.61■□□□□ 0.09
SSR3-202ENST00000463503 CAPN15O75808 1086 aa15.6■□□□□ 0.09
SSR3-202ENST00000463503 ITPK1Q13572 414 aa15.6■□□□□ 0.09
SSR3-202ENST00000463503 FLT4P35916 1363 aa15.6■□□□□ 0.09
SSR3-202ENST00000463503 LOC102724428A0A0B4J2F2 783 aa15.59■□□□□ 0.09
SSR3-202ENST00000463503 SIK1P57059 783 aa15.59■□□□□ 0.09
SSR3-202ENST00000463503 CARD11Q9BXL7 1154 aa15.59■□□□□ 0.09
SSR3-202ENST00000463503 BCS1LQ9Y276 419 aa15.59■□□□□ 0.09
SSR3-202ENST00000463503 TJP1Q07157 1748 aa15.59■□□□□ 0.09
SSR3-202ENST00000463503 AFDNP55196 1824 aaKnown RBP15.59■□□□□ 0.09
SSR3-202ENST00000463503 GNPATO15228 680 aa15.58■□□□□ 0.08
SSR3-202ENST00000463503 PRELPP51888 382 aa15.58■□□□□ 0.08
SSR3-202ENST00000463503 TGFB2P61812 414 aa15.58■□□□□ 0.08
SSR3-202ENST00000463503 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
SSR3-202ENST00000463503 HSP90AB2PQ58FF8 381 aa15.58■□□□□ 0.08
SSR3-202ENST00000463503 KIF24Q5T7B8 1368 aa15.58■□□□□ 0.08
SSR3-202ENST00000463503 A0A0G2JLW4 131 aa15.57■□□□□ 0.08
SSR3-202ENST00000463503 TESK2Q96S53 571 aa15.57■□□□□ 0.08
SSR3-202ENST00000463503 FSTL1Q12841 308 aa15.56■□□□□ 0.08
SSR3-202ENST00000463503 TNS4Q8IZW8 715 aa15.56■□□□□ 0.08
SSR3-202ENST00000463503 VIRMAQ69YN4 1812 aaKnown RBP15.55■□□□□ 0.08
SSR3-202ENST00000463503 FYB1O15117 783 aa15.55■□□□□ 0.08
SSR3-202ENST00000463503 DPEP1P16444 411 aa15.55■□□□□ 0.08
SSR3-202ENST00000463503 KCNA3P22001 575 aa15.55■□□□□ 0.08
SSR3-202ENST00000463503 ARHGAP27Q6ZUM4 889 aa15.55■□□□□ 0.08
SSR3-202ENST00000463503 DICER1Q9UPY3 1922 aaKnown RBP15.55■□□□□ 0.08
SSR3-202ENST00000463503 NRXN2Q9P2S2 1712 aa15.54■□□□□ 0.08
SSR3-202ENST00000463503 C9orf131Q5VYM1 1079 aa15.54■□□□□ 0.08
SSR3-202ENST00000463503 GGNBP2Q9H3C7 697 aa15.54■□□□□ 0.08
SSR3-202ENST00000463503 ASAP1Q9ULH1 1129 aa15.54■□□□□ 0.08
SSR3-202ENST00000463503 KDM6AO15550 1401 aaPredicted RBP15.52■□□□□ 0.08
SSR3-202ENST00000463503 FCHSD2O94868 740 aa15.52■□□□□ 0.08
SSR3-202ENST00000463503 ATP6V1AP38606 617 aa15.51■□□□□ 0.07
SSR3-202ENST00000463503 C16orf71Q8IYS4 520 aaPredicted RBP15.51■□□□□ 0.07
SSR3-202ENST00000463503 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
SSR3-202ENST00000463503 SLC4A9Q96Q91 983 aa15.51■□□□□ 0.07
SSR3-202ENST00000463503 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
SSR3-202ENST00000463503 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
SSR3-202ENST00000463503 GYS1P13807 737 aa15.5■□□□□ 0.07
SSR3-202ENST00000463503 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
SSR3-202ENST00000463503 SCN11AQ9UI33 1791 aa15.49■□□□□ 0.07
SSR3-202ENST00000463503 TMF1P82094 1093 aa15.49■□□□□ 0.07
SSR3-202ENST00000463503 NLGN1Q8N2Q7 840 aa15.49■□□□□ 0.07
SSR3-202ENST00000463503 CCDC87Q9NVE4 849 aa15.49■□□□□ 0.07
SSR3-202ENST00000463503 CNTNAP4Q9C0A0 1308 aa15.48■□□□□ 0.07
SSR3-202ENST00000463503 ADRA2BP18089 450 aa15.48■□□□□ 0.07
SSR3-202ENST00000463503 ARHGEF1Q92888 912 aaKnown RBP15.48■□□□□ 0.07
SSR3-202ENST00000463503 RTCBQ9Y3I0 505 aaKnown RBP15.48■□□□□ 0.07
SSR3-202ENST00000463503 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
SSR3-202ENST00000463503 ST20-MTHFSA0A0A6YYL1 179 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
SSR3-202ENST00000463503 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
SSR3-202ENST00000463503 PHKG2P15735 406 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 FER1L6Q2WGJ9 1857 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 TRAPPC3LQ5T215 181 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 ANKRD31Q8N7Z5 1873 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 RRAGCQ9HB90 399 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 RNF181Q9P0P0 153 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 SPG7Q9UQ90 795 aa15.47■□□□□ 0.07
SSR3-202ENST00000463503 CACNA1SQ13698 1873 aa15.46■□□□□ 0.07
SSR3-202ENST00000463503 SMC1BQ8NDV3 1235 aa15.46■□□□□ 0.07
SSR3-202ENST00000463503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.07
SSR3-202ENST00000463503 COL11A2P13942 1736 aaPredicted RBP15.46■□□□□ 0.06
SSR3-202ENST00000463503 RC3H1Q5TC82 1133 aaKnown RBP15.45■□□□□ 0.06
SSR3-202ENST00000463503 PIM2Q9P1W9 311 aa15.45■□□□□ 0.06
SSR3-202ENST00000463503 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
SSR3-202ENST00000463503 DDR1Q08345 913 aa15.44■□□□□ 0.06
SSR3-202ENST00000463503 PARP3Q9Y6F1 533 aa15.44■□□□□ 0.06
SSR3-202ENST00000463503 DALRD3Q5D0E6 543 aaKnown RBP15.43■□□□□ 0.06
SSR3-202ENST00000463503 IFNL2Q8IZJ0 200 aa15.43■□□□□ 0.06
SSR3-202ENST00000463503 EYA1Q99502 592 aa15.43■□□□□ 0.06
SSR3-202ENST00000463503 ARFGEF2Q9Y6D5 1785 aa15.42■□□□□ 0.06
SSR3-202ENST00000463503 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
SSR3-202ENST00000463503 CHRNA5P30532 468 aa15.42■□□□□ 0.06
SSR3-202ENST00000463503 RFC4P35249 363 aa15.42■□□□□ 0.06
SSR3-202ENST00000463503 USP42Q9H9J4 1324 aaKnown RBP15.42■□□□□ 0.06
SSR3-202ENST00000463503 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
SSR3-202ENST00000463503 RASSF7Q02833 373 aa15.41■□□□□ 0.06
SSR3-202ENST00000463503 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
SSR3-202ENST00000463503 FKBP8Q14318 412 aa15.4■□□□□ 0.06
SSR3-202ENST00000463503 SRP68Q9UHB9 627 aaKnown RBP15.4■□□□□ 0.06
SSR3-202ENST00000463503 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
SSR3-202ENST00000463503 SLC34A2O95436 690 aa15.39■□□□□ 0.05
SSR3-202ENST00000463503 CARD14Q9BXL6 1004 aa15.39■□□□□ 0.05
SSR3-202ENST00000463503 SCN7AQ01118 1682 aa15.38■□□□□ 0.05
SSR3-202ENST00000463503 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
SSR3-202ENST00000463503 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
SSR3-202ENST00000463503 GLTPD2A6NH11 291 aa15.37■□□□□ 0.05
SSR3-202ENST00000463503 ERVV-2B6SEH9 535 aa15.37■□□□□ 0.05
SSR3-202ENST00000463503 POLRMTO00411 1230 aaKnown RBP15.37■□□□□ 0.05
SSR3-202ENST00000463503 SCN4AP35499 1836 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms