RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
COL4A2-204ENST00000463084 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
COL4A2-204ENST00000463084 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
COL4A2-204ENST00000463084 MMP10P09238 476 aa17.88■□□□□ 0.45
COL4A2-204ENST00000463084 PLEKHO1Q53GL0 409 aaPredicted RBP17.88■□□□□ 0.45
COL4A2-204ENST00000463084 CABP4P57796 275 aa17.87■□□□□ 0.45
COL4A2-204ENST00000463084 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
COL4A2-204ENST00000463084 TRAPPC3LQ5T215 181 aa17.87■□□□□ 0.45
COL4A2-204ENST00000463084 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
COL4A2-204ENST00000463084 PANK3Q9H999 370 aa17.87■□□□□ 0.45
COL4A2-204ENST00000463084 HSPA5P11021 654 aaKnown RBP17.86■□□□□ 0.45
COL4A2-204ENST00000463084 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
COL4A2-204ENST00000463084 MAP2P11137 1827 aaKnown RBP17.85■□□□□ 0.45
COL4A2-204ENST00000463084 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
COL4A2-204ENST00000463084 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
COL4A2-204ENST00000463084 ERVV-2B6SEH9 535 aa17.84■□□□□ 0.45
COL4A2-204ENST00000463084 RFC4P35249 363 aa17.84■□□□□ 0.45
COL4A2-204ENST00000463084 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
COL4A2-204ENST00000463084 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
COL4A2-204ENST00000463084 PTCD1O75127 700 aaKnown RBP17.83■□□□□ 0.44
COL4A2-204ENST00000463084 MTHFSP49914 203 aa17.83■□□□□ 0.44
COL4A2-204ENST00000463084 AMOTQ4VCS5 1084 aa17.83■□□□□ 0.44
COL4A2-204ENST00000463084 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
COL4A2-204ENST00000463084 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
COL4A2-204ENST00000463084 CCDC87Q9NVE4 849 aa17.82■□□□□ 0.44
COL4A2-204ENST00000463084 KNSTRNQ9Y448 316 aa17.82■□□□□ 0.44
COL4A2-204ENST00000463084 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
COL4A2-204ENST00000463084 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
COL4A2-204ENST00000463084 A0A0G2JLW4 131 aa17.8■□□□□ 0.44
COL4A2-204ENST00000463084 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
COL4A2-204ENST00000463084 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
COL4A2-204ENST00000463084 KDRP35968 1356 aa17.79■□□□□ 0.44
COL4A2-204ENST00000463084 ADRA2BP18089 450 aa17.79■□□□□ 0.44
COL4A2-204ENST00000463084 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
COL4A2-204ENST00000463084 CICQ96RK0 1608 aaPredicted RBP17.79■□□□□ 0.44
COL4A2-204ENST00000463084 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
COL4A2-204ENST00000463084 RPS6KA4O75676 772 aa17.78■□□□□ 0.44
COL4A2-204ENST00000463084 FCHSD2O94868 740 aa17.78■□□□□ 0.44
COL4A2-204ENST00000463084 SLC4A9Q96Q91 983 aa17.78■□□□□ 0.44
COL4A2-204ENST00000463084 ADCY9O60503 1353 aa17.78■□□□□ 0.44
COL4A2-204ENST00000463084 PLEKHG2Q9H7P9 1386 aa17.78■□□□□ 0.44
COL4A2-204ENST00000463084 TGFB2P61812 414 aa17.77■□□□□ 0.44
COL4A2-204ENST00000463084 RC3H1Q5TC82 1133 aaKnown RBP17.77■□□□□ 0.44
COL4A2-204ENST00000463084 NFATC2IPQ8NCF5 419 aa17.77■□□□□ 0.44
COL4A2-204ENST00000463084 KDM6AO15550 1401 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-204ENST00000463084 GOLGB1Q14789 3259 aaKnown RBP17.76■□□□□ 0.43
COL4A2-204ENST00000463084 PXDNLA1KZ92 1463 aa17.76■□□□□ 0.43
COL4A2-204ENST00000463084 GYS1P13807 737 aa17.76■□□□□ 0.43
COL4A2-204ENST00000463084 DPEP1P16444 411 aa17.76■□□□□ 0.43
COL4A2-204ENST00000463084 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
COL4A2-204ENST00000463084 HSPA6P17066 643 aa17.75■□□□□ 0.43
COL4A2-204ENST00000463084 CNGB1Q14028 1251 aaPredicted RBP17.74■□□□□ 0.43
COL4A2-204ENST00000463084 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
COL4A2-204ENST00000463084 C10orf71Q711Q0 1435 aa17.73■□□□□ 0.43
COL4A2-204ENST00000463084 ZPR1O75312 459 aa17.71■□□□□ 0.43
COL4A2-204ENST00000463084 HMOX1P09601 288 aa17.71■□□□□ 0.43
COL4A2-204ENST00000463084 IL13P35225 146 aa17.7■□□□□ 0.42
COL4A2-204ENST00000463084 FKBP8Q14318 412 aa17.7■□□□□ 0.42
COL4A2-204ENST00000463084 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
COL4A2-204ENST00000463084 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
COL4A2-204ENST00000463084 PIM2Q9P1W9 311 aa17.7■□□□□ 0.42
COL4A2-204ENST00000463084 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
COL4A2-204ENST00000463084 N4BP2Q86UW6 1770 aaPredicted RBP17.69■□□□□ 0.42
COL4A2-204ENST00000463084 KIF3CO14782 793 aa17.69■□□□□ 0.42
COL4A2-204ENST00000463084 DALRD3Q5D0E6 543 aaKnown RBP17.69■□□□□ 0.42
COL4A2-204ENST00000463084 DNAJC10Q8IXB1 793 aa17.69■□□□□ 0.42
COL4A2-204ENST00000463084 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
COL4A2-204ENST00000463084 C9orf131Q5VYM1 1079 aa17.68■□□□□ 0.42
COL4A2-204ENST00000463084 SLC52A2Q9HAB3 445 aa17.68■□□□□ 0.42
COL4A2-204ENST00000463084 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
COL4A2-204ENST00000463084 CC2D1BQ5T0F9 858 aaKnown RBP17.67■□□□□ 0.42
COL4A2-204ENST00000463084 COL5A3P25940 1745 aaPredicted RBP17.67■□□□□ 0.42
COL4A2-204ENST00000463084 CHRNA5P30532 468 aa17.66■□□□□ 0.42
COL4A2-204ENST00000463084 DDR1Q08345 913 aa17.66■□□□□ 0.42
COL4A2-204ENST00000463084 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
COL4A2-204ENST00000463084 LGR6Q9HBX8 967 aa17.66■□□□□ 0.42
COL4A2-204ENST00000463084 NMRK2Q9NPI5 230 aa17.66■□□□□ 0.42
COL4A2-204ENST00000463084 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
COL4A2-204ENST00000463084 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
COL4A2-204ENST00000463084 RNF181Q9P0P0 153 aa17.65■□□□□ 0.42
COL4A2-204ENST00000463084 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
COL4A2-204ENST00000463084 TOMM70O94826 608 aa17.64■□□□□ 0.41
COL4A2-204ENST00000463084 INTS5Q6P9B9 1019 aaKnown RBP17.64■□□□□ 0.41
COL4A2-204ENST00000463084 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
COL4A2-204ENST00000463084 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
COL4A2-204ENST00000463084 APLP1P51693 650 aa17.63■□□□□ 0.41
COL4A2-204ENST00000463084 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
COL4A2-204ENST00000463084 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
COL4A2-204ENST00000463084 ZNF330Q9Y3S2 320 aaPredicted RBP17.63■□□□□ 0.41
COL4A2-204ENST00000463084 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
COL4A2-204ENST00000463084 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
COL4A2-204ENST00000463084 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
COL4A2-204ENST00000463084 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
COL4A2-204ENST00000463084 SOS1Q07889 1333 aaPredicted RBP17.62■□□□□ 0.41
COL4A2-204ENST00000463084 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
COL4A2-204ENST00000463084 COL15A1P39059 1388 aa17.62■□□□□ 0.41
COL4A2-204ENST00000463084 KIAA1551Q9HCM1 1747 aa17.61■□□□□ 0.41
COL4A2-204ENST00000463084 KCNA3P22001 575 aa17.61■□□□□ 0.41
COL4A2-204ENST00000463084 MTHFSDQ2M296 383 aaKnown RBP17.61■□□□□ 0.41
COL4A2-204ENST00000463084 BICDL1Q6ZP65 573 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms