RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 KIF3CO14782 793 aa21.81■■□□□ 1.08
SND1-203ENST00000463020 MMP10P09238 476 aa21.81■■□□□ 1.08
SND1-203ENST00000463020 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
SND1-203ENST00000463020 N4BP2Q86UW6 1770 aaPredicted RBP21.8■■□□□ 1.08
SND1-203ENST00000463020 HSPA6P17066 643 aa21.8■■□□□ 1.08
SND1-203ENST00000463020 KIF13BQ9NQT8 1826 aa21.79■■□□□ 1.08
SND1-203ENST00000463020 TNNT2P45379 298 aaPredicted RBP21.79■■□□□ 1.08
SND1-203ENST00000463020 CDCA8Q53HL2 280 aa21.79■■□□□ 1.08
SND1-203ENST00000463020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.08
SND1-203ENST00000463020 IFNL2Q8IZJ0 200 aa21.78■■□□□ 1.08
SND1-203ENST00000463020 A0A0G2JLW4 131 aa21.76■■□□□ 1.07
SND1-203ENST00000463020 KDM6AO15550 1401 aaPredicted RBP21.76■■□□□ 1.07
SND1-203ENST00000463020 COL5A3P25940 1745 aaPredicted RBP21.76■■□□□ 1.07
SND1-203ENST00000463020 C10orf71Q711Q0 1435 aa21.76■■□□□ 1.07
SND1-203ENST00000463020 HMGB2P26583 209 aaKnown RBP21.73■■□□□ 1.07
SND1-203ENST00000463020 ARHGEF1Q92888 912 aaKnown RBP21.73■■□□□ 1.07
SND1-203ENST00000463020 C4AP0C0L4 1744 aa21.72■■□□□ 1.07
SND1-203ENST00000463020 GYS1P13807 737 aa21.72■■□□□ 1.07
SND1-203ENST00000463020 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
SND1-203ENST00000463020 MYH14Q7Z406 1995 aaKnown RBP21.71■■□□□ 1.07
SND1-203ENST00000463020 DPEP1P16444 411 aa21.71■■□□□ 1.07
SND1-203ENST00000463020 BCS1LQ9Y276 419 aa21.71■■□□□ 1.07
SND1-203ENST00000463020 ZNF831Q5JPB2 1677 aa21.71■■□□□ 1.07
SND1-203ENST00000463020 TRAPPC3LQ5T215 181 aa21.7■■□□□ 1.06
SND1-203ENST00000463020 AEBP1Q8IUX7 1158 aa21.7■■□□□ 1.06
SND1-203ENST00000463020 POLR3GLQ9BT43 218 aa21.7■■□□□ 1.06
SND1-203ENST00000463020 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
SND1-203ENST00000463020 RTCBQ9Y3I0 505 aaKnown RBP21.7■■□□□ 1.06
SND1-203ENST00000463020 BRCA1P38398 1863 aaKnown RBP21.69■■□□□ 1.06
SND1-203ENST00000463020 KCNA3P22001 575 aa21.69■■□□□ 1.06
SND1-203ENST00000463020 ERVV-2B6SEH9 535 aa21.68■■□□□ 1.06
SND1-203ENST00000463020 NMRK2Q9NPI5 230 aa21.68■■□□□ 1.06
SND1-203ENST00000463020 CNTNAP4Q9C0A0 1308 aa21.68■■□□□ 1.06
SND1-203ENST00000463020 TGFB2P61812 414 aa21.67■■□□□ 1.06
SND1-203ENST00000463020 SRP68Q9UHB9 627 aaKnown RBP21.67■■□□□ 1.06
SND1-203ENST00000463020 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
SND1-203ENST00000463020 ZNF530Q6P9A1 599 aaPredicted RBP21.66■■□□□ 1.06
SND1-203ENST00000463020 NLGN1Q8N2Q7 840 aa21.66■■□□□ 1.06
SND1-203ENST00000463020 DCAF5Q96JK2 942 aa21.66■■□□□ 1.06
SND1-203ENST00000463020 TJP1Q07157 1748 aa21.66■■□□□ 1.06
SND1-203ENST00000463020 RPS6KA4O75676 772 aa21.65■■□□□ 1.06
SND1-203ENST00000463020 ARHGAP27Q6ZUM4 889 aa21.65■■□□□ 1.06
SND1-203ENST00000463020 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
SND1-203ENST00000463020 DDR1Q08345 913 aa21.64■■□□□ 1.05
SND1-203ENST00000463020 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
SND1-203ENST00000463020 PLEKHG2Q9H7P9 1386 aa21.63■■□□□ 1.05
SND1-203ENST00000463020 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
SND1-203ENST00000463020 FCHSD2O94868 740 aa21.63■■□□□ 1.05
SND1-203ENST00000463020 DNAJC5GQ8N7S2 189 aa21.63■■□□□ 1.05
SND1-203ENST00000463020 ADRA2BP18089 450 aa21.62■■□□□ 1.05
SND1-203ENST00000463020 RFC4P35249 363 aa21.62■■□□□ 1.05
SND1-203ENST00000463020 CRKLP46109 303 aaKnown RBP21.62■■□□□ 1.05
SND1-203ENST00000463020 CABP4P57796 275 aa21.62■■□□□ 1.05
SND1-203ENST00000463020 FKBP8Q14318 412 aa21.62■■□□□ 1.05
SND1-203ENST00000463020 PANK3Q9H999 370 aa21.62■■□□□ 1.05
SND1-203ENST00000463020 CCDC87Q9NVE4 849 aa21.62■■□□□ 1.05
SND1-203ENST00000463020 HTRA3P83110 453 aa21.61■■□□□ 1.05
SND1-203ENST00000463020 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
SND1-203ENST00000463020 C9orf131Q5VYM1 1079 aa21.6■■□□□ 1.05
SND1-203ENST00000463020 NFATC2IPQ8NCF5 419 aa21.6■■□□□ 1.05
SND1-203ENST00000463020 PARP3Q9Y6F1 533 aa21.6■■□□□ 1.05
SND1-203ENST00000463020 PCNTO95613 3336 aa21.6■■□□□ 1.05
SND1-203ENST00000463020 USP42Q9H9J4 1324 aaKnown RBP21.59■■□□□ 1.05
SND1-203ENST00000463020 TOMM70O94826 608 aa21.59■■□□□ 1.05
SND1-203ENST00000463020 CHRNA5P30532 468 aa21.59■■□□□ 1.05
SND1-203ENST00000463020 ARFGEF1Q9Y6D6 1849 aa21.59■■□□□ 1.05
SND1-203ENST00000463020 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.05
SND1-203ENST00000463020 MTHFSP49914 203 aa21.58■■□□□ 1.05
SND1-203ENST00000463020 APLP1P51693 650 aa21.58■■□□□ 1.05
SND1-203ENST00000463020 INTS5Q6P9B9 1019 aaKnown RBP21.58■■□□□ 1.05
SND1-203ENST00000463020 KCPQ6ZWJ8 1503 aa21.58■■□□□ 1.04
SND1-203ENST00000463020 HSPA5P11021 654 aaKnown RBP21.57■■□□□ 1.04
SND1-203ENST00000463020 AMOTQ4VCS5 1084 aa21.56■■□□□ 1.04
SND1-203ENST00000463020 SULT6B1Q6IMI4 303 aa21.56■■□□□ 1.04
SND1-203ENST00000463020 WDR90Q96KV7 1748 aa21.55■■□□□ 1.04
SND1-203ENST00000463020 SCN11AQ9UI33 1791 aa21.54■■□□□ 1.04
SND1-203ENST00000463020 POLRMTO00411 1230 aaKnown RBP21.54■■□□□ 1.04
SND1-203ENST00000463020 IL13P35225 146 aa21.54■■□□□ 1.04
SND1-203ENST00000463020 DNAJC10Q8IXB1 793 aa21.54■■□□□ 1.04
SND1-203ENST00000463020 PIM2Q9P1W9 311 aa21.54■■□□□ 1.04
SND1-203ENST00000463020 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
SND1-203ENST00000463020 LGR6Q9HBX8 967 aa21.53■■□□□ 1.04
SND1-203ENST00000463020 TM4SF1P30408 202 aa21.52■■□□□ 1.04
SND1-203ENST00000463020 PRELPP51888 382 aa21.52■■□□□ 1.04
SND1-203ENST00000463020 DALRD3Q5D0E6 543 aaKnown RBP21.52■■□□□ 1.04
SND1-203ENST00000463020 MORC1Q86VD1 984 aa21.52■■□□□ 1.04
SND1-203ENST00000463020 RASSF7Q02833 373 aa21.51■■□□□ 1.03
SND1-203ENST00000463020 USPL1Q5W0Q7 1092 aa21.51■■□□□ 1.03
SND1-203ENST00000463020 RNF181Q9P0P0 153 aa21.51■■□□□ 1.03
SND1-203ENST00000463020 TIMELESSQ9UNS1 1208 aa21.51■■□□□ 1.03
SND1-203ENST00000463020 SLC39A6Q13433 755 aa21.5■■□□□ 1.03
SND1-203ENST00000463020 RBM46Q8TBY0 533 aaKnown RBP21.5■■□□□ 1.03
SND1-203ENST00000463020 SOS1Q07889 1333 aaPredicted RBP21.5■■□□□ 1.03
SND1-203ENST00000463020 MRC1P22897 1456 aa21.49■■□□□ 1.03
SND1-203ENST00000463020 SBF1O95248 1867 aa21.49■■□□□ 1.03
SND1-203ENST00000463020 BCL2L12Q9HB09 334 aa21.48■■□□□ 1.03
SND1-203ENST00000463020 RRAGCQ9HB90 399 aa21.48■■□□□ 1.03
SND1-203ENST00000463020 AFDNP55196 1824 aaKnown RBP21.48■■□□□ 1.03
SND1-203ENST00000463020 CYP19A1P11511 503 aaPredicted RBP21.47■■□□□ 1.03
SND1-203ENST00000463020 EIF4G2P78344 907 aaKnown RBP eCLIP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms