RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 ATAD2Q6PL18 1390 aa12.85□□□□□ -0.35
COL4A2-203ENST00000462309 FOXO3O43524 673 aa12.85□□□□□ -0.35
COL4A2-203ENST00000462309 ABL1P00519 1130 aa12.85□□□□□ -0.35
COL4A2-203ENST00000462309 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
COL4A2-203ENST00000462309 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
COL4A2-203ENST00000462309 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
COL4A2-203ENST00000462309 C21orf2O43822 256 aa12.84□□□□□ -0.35
COL4A2-203ENST00000462309 ERCC3P19447 782 aa12.84□□□□□ -0.35
COL4A2-203ENST00000462309 RBM25P49756 843 aaKnown RBP12.84□□□□□ -0.35
COL4A2-203ENST00000462309 ECM1Q16610 540 aa12.84□□□□□ -0.35
COL4A2-203ENST00000462309 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
COL4A2-203ENST00000462309 SCG3Q8WXD2 468 aaKnown RBP12.84□□□□□ -0.35
COL4A2-203ENST00000462309 MKNK1Q9BUB5 465 aa12.84□□□□□ -0.35
COL4A2-203ENST00000462309 PGPEP1Q9NXJ5 209 aa12.84□□□□□ -0.35
COL4A2-203ENST00000462309 ZNF211Q13398 564 aaPredicted RBP12.83□□□□□ -0.36
COL4A2-203ENST00000462309 ESCO1Q5FWF5 840 aa12.83□□□□□ -0.36
COL4A2-203ENST00000462309 DNMT3AQ9Y6K1 912 aaPredicted RBP12.83□□□□□ -0.36
COL4A2-203ENST00000462309 FOXK2Q01167 660 aa12.82□□□□□ -0.36
COL4A2-203ENST00000462309 MTFR1Q15390 333 aa12.82□□□□□ -0.36
COL4A2-203ENST00000462309 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
COL4A2-203ENST00000462309 TSPAN10Q9H1Z9 355 aaPredicted RBP12.82□□□□□ -0.36
COL4A2-203ENST00000462309 ANO2Q9NQ90 1003 aa12.82□□□□□ -0.36
COL4A2-203ENST00000462309 BIN2Q9UBW5 565 aaPredicted RBP12.82□□□□□ -0.36
COL4A2-203ENST00000462309 MARSP56192 900 aaKnown RBP12.81□□□□□ -0.36
COL4A2-203ENST00000462309 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL4A2-203ENST00000462309 SF3B2Q13435 895 aaKnown RBP12.81□□□□□ -0.36
COL4A2-203ENST00000462309 A6NJY4 79 aa12.8□□□□□ -0.36
COL4A2-203ENST00000462309 H3BRB1 525 aa12.8□□□□□ -0.36
COL4A2-203ENST00000462309 SMTNP53814 917 aa12.8□□□□□ -0.36
COL4A2-203ENST00000462309 ZNF598Q86UK7 904 aaKnown RBP12.8□□□□□ -0.36
COL4A2-203ENST00000462309 TUT1Q9H6E5 874 aaKnown RBP12.8□□□□□ -0.36
COL4A2-203ENST00000462309 SCHIP1Q9P0W5 487 aaPredicted RBP12.8□□□□□ -0.36
COL4A2-203ENST00000462309 Q6ZNB5 142 aa12.79□□□□□ -0.36
COL4A2-203ENST00000462309 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
COL4A2-203ENST00000462309 KDF1Q8NAX2 398 aaPredicted RBP12.79□□□□□ -0.36
COL4A2-203ENST00000462309 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
COL4A2-203ENST00000462309 HRH3Q9Y5N1 445 aa12.79□□□□□ -0.36
COL4A2-203ENST00000462309 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
COL4A2-203ENST00000462309 IL2RAP01589 272 aa12.78□□□□□ -0.36
COL4A2-203ENST00000462309 NNTQ13423 1086 aa12.78□□□□□ -0.36
COL4A2-203ENST00000462309 NAA30Q147X3 362 aaPredicted RBP12.78□□□□□ -0.36
COL4A2-203ENST00000462309 ZNF697Q5TEC3 545 aa12.78□□□□□ -0.36
COL4A2-203ENST00000462309 GLYCTKQ8IVS8 523 aa12.78□□□□□ -0.36
COL4A2-203ENST00000462309 A0A1W2PRU2 124 aa12.77□□□□□ -0.37
COL4A2-203ENST00000462309 RBM47A0AV96 593 aaKnown RBP12.77□□□□□ -0.37
COL4A2-203ENST00000462309 HELQQ8TDG4 1101 aa12.77□□□□□ -0.37
COL4A2-203ENST00000462309 KLF16Q9BXK1 252 aaPredicted RBP12.77□□□□□ -0.37
COL4A2-203ENST00000462309 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.37
COL4A2-203ENST00000462309 RAB6BQ9NRW1 208 aa12.77□□□□□ -0.37
COL4A2-203ENST00000462309 ADH1AP07327 375 aa12.76□□□□□ -0.37
COL4A2-203ENST00000462309 NPR3P17342 541 aa12.76□□□□□ -0.37
COL4A2-203ENST00000462309 ARHGAP4P98171 946 aa12.76□□□□□ -0.37
COL4A2-203ENST00000462309 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
COL4A2-203ENST00000462309 MTMR3Q13615 1198 aa12.75□□□□□ -0.37
COL4A2-203ENST00000462309 Q6ZVU0 165 aa12.75□□□□□ -0.37
COL4A2-203ENST00000462309 SLC9A9Q8IVB4 645 aa12.75□□□□□ -0.37
COL4A2-203ENST00000462309 SNIP1Q8TAD8 396 aaKnown RBP12.75□□□□□ -0.37
COL4A2-203ENST00000462309 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
COL4A2-203ENST00000462309 C2orf49Q9BVC5 232 aaPredicted RBP12.75□□□□□ -0.37
COL4A2-203ENST00000462309 CDK2AP1O14519 115 aa12.74□□□□□ -0.37
COL4A2-203ENST00000462309 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
COL4A2-203ENST00000462309 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
COL4A2-203ENST00000462309 IQSEC3Q9UPP2 1182 aaPredicted RBP12.74□□□□□ -0.37
COL4A2-203ENST00000462309 WASF2Q9Y6W5 498 aa12.74□□□□□ -0.37
COL4A2-203ENST00000462309 A0A0G2JS52 829 aa12.73□□□□□ -0.37
COL4A2-203ENST00000462309 E9PSI1 815 aa12.73□□□□□ -0.37
COL4A2-203ENST00000462309 FOXC1Q12948 553 aa12.73□□□□□ -0.37
COL4A2-203ENST00000462309 CBLBQ13191 982 aa12.73□□□□□ -0.37
COL4A2-203ENST00000462309 TBCELQ5QJ74 424 aa12.73□□□□□ -0.37
COL4A2-203ENST00000462309 POTEAQ6S8J7 498 aa12.73□□□□□ -0.37
COL4A2-203ENST00000462309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL4A2-203ENST00000462309 CLN3Q13286 438 aa12.72□□□□□ -0.37
COL4A2-203ENST00000462309 VTI1AQ96AJ9 217 aa12.72□□□□□ -0.37
COL4A2-203ENST00000462309 V9GY48 417 aaPredicted RBP12.72□□□□□ -0.37
COL4A2-203ENST00000462309 ANKRD33BA6NCL7 494 aa12.71□□□□□ -0.37
COL4A2-203ENST00000462309 PTGIRP43119 386 aa12.71□□□□□ -0.37
COL4A2-203ENST00000462309 PSMA6P60900 246 aaKnown RBP12.71□□□□□ -0.37
COL4A2-203ENST00000462309 ITPKCQ96DU7 683 aa12.71□□□□□ -0.37
COL4A2-203ENST00000462309 SAP130Q9H0E3 1048 aa12.71□□□□□ -0.37
COL4A2-203ENST00000462309 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.37
COL4A2-203ENST00000462309 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
COL4A2-203ENST00000462309 C16orf46Q6P387 395 aa12.7□□□□□ -0.38
COL4A2-203ENST00000462309 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
COL4A2-203ENST00000462309 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
COL4A2-203ENST00000462309 GDF9O60383 454 aa12.69□□□□□ -0.38
COL4A2-203ENST00000462309 FAM13AO94988 1023 aa12.69□□□□□ -0.38
COL4A2-203ENST00000462309 TLR1Q15399 786 aa12.69□□□□□ -0.38
COL4A2-203ENST00000462309 PRKD2Q9BZL6 878 aa12.69□□□□□ -0.38
COL4A2-203ENST00000462309 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
COL4A2-203ENST00000462309 J3QL48 77 aa12.68□□□□□ -0.38
COL4A2-203ENST00000462309 ZIC2O95409 532 aaPredicted RBP12.68□□□□□ -0.38
COL4A2-203ENST00000462309 CENPCQ03188 943 aa12.68□□□□□ -0.38
COL4A2-203ENST00000462309 ZNF295-AS1Q8N0V1 137 aa12.68□□□□□ -0.38
COL4A2-203ENST00000462309 ASB16Q96NS5 453 aa12.68□□□□□ -0.38
COL4A2-203ENST00000462309 COX20Q5RI15 118 aa12.67□□□□□ -0.38
COL4A2-203ENST00000462309 TIMP2P16035 220 aa12.66□□□□□ -0.38
COL4A2-203ENST00000462309 MAPK1P28482 360 aa12.66□□□□□ -0.38
COL4A2-203ENST00000462309 WDR4P57081 412 aaKnown RBP12.66□□□□□ -0.38
COL4A2-203ENST00000462309 TEAD4Q15561 434 aa12.66□□□□□ -0.38
COL4A2-203ENST00000462309 MYO19Q96H55 970 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms