RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 ATP6V1AP38606 617 aa16.23■□□□□ 0.19
SCAMP3-203ENST00000462151 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
SCAMP3-203ENST00000462151 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
SCAMP3-203ENST00000462151 ITPK1Q13572 414 aa16.22■□□□□ 0.19
SCAMP3-203ENST00000462151 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
SCAMP3-203ENST00000462151 AMIGO3Q86WK7 504 aa16.22■□□□□ 0.19
SCAMP3-203ENST00000462151 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
SCAMP3-203ENST00000462151 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
SCAMP3-203ENST00000462151 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
SCAMP3-203ENST00000462151 GNPATO15228 680 aa16.2■□□□□ 0.18
SCAMP3-203ENST00000462151 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
SCAMP3-203ENST00000462151 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
SCAMP3-203ENST00000462151 KDRP35968 1356 aa16.2■□□□□ 0.18
SCAMP3-203ENST00000462151 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
SCAMP3-203ENST00000462151 IL13P35225 146 aa16.19■□□□□ 0.18
SCAMP3-203ENST00000462151 MTHFSP49914 203 aa16.19■□□□□ 0.18
SCAMP3-203ENST00000462151 CABP4P57796 275 aa16.19■□□□□ 0.18
SCAMP3-203ENST00000462151 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
SCAMP3-203ENST00000462151 ZNF831Q5JPB2 1677 aa16.18■□□□□ 0.18
SCAMP3-203ENST00000462151 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
SCAMP3-203ENST00000462151 RTCBQ9Y3I0 505 aaKnown RBP16.17■□□□□ 0.18
SCAMP3-203ENST00000462151 YBX3P16989 372 aaKnown RBP eCLIP16.16■□□□□ 0.188e-7■■■□□ 18.5
SCAMP3-203ENST00000462151 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
SCAMP3-203ENST00000462151 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
SCAMP3-203ENST00000462151 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
SCAMP3-203ENST00000462151 CNTNAP4Q9C0A0 1308 aa16.15■□□□□ 0.18
SCAMP3-203ENST00000462151 ADRA2BP18089 450 aa16.14■□□□□ 0.17
SCAMP3-203ENST00000462151 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
SCAMP3-203ENST00000462151 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
SCAMP3-203ENST00000462151 AKAP4Q5JQC9 854 aa16.13■□□□□ 0.17
SCAMP3-203ENST00000462151 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
SCAMP3-203ENST00000462151 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
SCAMP3-203ENST00000462151 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
SCAMP3-203ENST00000462151 MMP10P09238 476 aa16.12■□□□□ 0.17
SCAMP3-203ENST00000462151 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
SCAMP3-203ENST00000462151 SCN11AQ9UI33 1791 aa16.11■□□□□ 0.17
SCAMP3-203ENST00000462151 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
SCAMP3-203ENST00000462151 RPS6KA4O75676 772 aa16.11■□□□□ 0.17
SCAMP3-203ENST00000462151 HMOX1P09601 288 aa16.11■□□□□ 0.17
SCAMP3-203ENST00000462151 NLGN1Q8N2Q7 840 aa16.11■□□□□ 0.17
SCAMP3-203ENST00000462151 ARHGEF1Q92888 912 aaKnown RBP16.11■□□□□ 0.17
SCAMP3-203ENST00000462151 RFC4P35249 363 aa16.1■□□□□ 0.17
SCAMP3-203ENST00000462151 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
SCAMP3-203ENST00000462151 MYH14Q7Z406 1995 aaKnown RBP16.08■□□□□ 0.16
SCAMP3-203ENST00000462151 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
SCAMP3-203ENST00000462151 GYS1P13807 737 aa16.08■□□□□ 0.16
SCAMP3-203ENST00000462151 CRKLP46109 303 aaKnown RBP16.08■□□□□ 0.16
SCAMP3-203ENST00000462151 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.16
SCAMP3-203ENST00000462151 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
SCAMP3-203ENST00000462151 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
SCAMP3-203ENST00000462151 LGR6Q9HBX8 967 aa16.07■□□□□ 0.16
SCAMP3-203ENST00000462151 MRC1P22897 1456 aa16.07■□□□□ 0.16
SCAMP3-203ENST00000462151 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
SCAMP3-203ENST00000462151 TJP1Q07157 1748 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 TGFB2P61812 414 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
SCAMP3-203ENST00000462151 PXDNLA1KZ92 1463 aa16.04■□□□□ 0.16
SCAMP3-203ENST00000462151 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
SCAMP3-203ENST00000462151 ATP10DQ9P241 1426 aa16.03■□□□□ 0.16
SCAMP3-203ENST00000462151 USP42Q9H9J4 1324 aaKnown RBP16.03■□□□□ 0.16
SCAMP3-203ENST00000462151 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
SCAMP3-203ENST00000462151 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
SCAMP3-203ENST00000462151 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
SCAMP3-203ENST00000462151 INTS5Q6P9B9 1019 aaKnown RBP16.03■□□□□ 0.16
SCAMP3-203ENST00000462151 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
SCAMP3-203ENST00000462151 SRP68Q9UHB9 627 aaKnown RBP16.02■□□□□ 0.16
SCAMP3-203ENST00000462151 VIRMAQ69YN4 1812 aaKnown RBP16.02■□□□□ 0.16
SCAMP3-203ENST00000462151 ADCY9O60503 1353 aa16.01■□□□□ 0.15
SCAMP3-203ENST00000462151 KCPQ6ZWJ8 1503 aa16.01■□□□□ 0.15
SCAMP3-203ENST00000462151 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
SCAMP3-203ENST00000462151 GAS2L2Q8NHY3 880 aa16.01■□□□□ 0.15
SCAMP3-203ENST00000462151 KIAA1551Q9HCM1 1747 aa16.01■□□□□ 0.15
SCAMP3-203ENST00000462151 A0A0G2JLW4 131 aa16■□□□□ 0.15
SCAMP3-203ENST00000462151 ZPR1O75312 459 aa16■□□□□ 0.15
SCAMP3-203ENST00000462151 CYP19A1P11511 503 aaPredicted RBP16■□□□□ 0.15
SCAMP3-203ENST00000462151 FKBP8Q14318 412 aa16■□□□□ 0.15
SCAMP3-203ENST00000462151 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
SCAMP3-203ENST00000462151 CFAP53Q96M91 514 aa16■□□□□ 0.15
SCAMP3-203ENST00000462151 BCS1LQ9Y276 419 aa16■□□□□ 0.15
SCAMP3-203ENST00000462151 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
SCAMP3-203ENST00000462151 SOS1Q07889 1333 aaPredicted RBP15.99■□□□□ 0.15
SCAMP3-203ENST00000462151 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
SCAMP3-203ENST00000462151 TTC5Q8N0Z6 440 aa15.99■□□□□ 0.15
SCAMP3-203ENST00000462151 GPBP1L1Q9HC44 474 aaPredicted RBP15.99■□□□□ 0.15
SCAMP3-203ENST00000462151 DPEP1P16444 411 aa15.98■□□□□ 0.15
SCAMP3-203ENST00000462151 DDR1Q08345 913 aa15.98■□□□□ 0.15
SCAMP3-203ENST00000462151 TEFQ10587 303 aa15.98■□□□□ 0.15
SCAMP3-203ENST00000462151 USPL1Q5W0Q7 1092 aa15.97■□□□□ 0.15
SCAMP3-203ENST00000462151 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
SCAMP3-203ENST00000462151 COL15A1P39059 1388 aa15.97■□□□□ 0.15
SCAMP3-203ENST00000462151 UBR2Q8IWV8 1755 aa15.96■□□□□ 0.15
SCAMP3-203ENST00000462151 FCHSD2O94868 740 aa15.96■□□□□ 0.15
SCAMP3-203ENST00000462151 STARD3NLO95772 234 aa15.96■□□□□ 0.15
SCAMP3-203ENST00000462151 TM4SF1P30408 202 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms