RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	KCNQ3	O43525	872 aa		32.19	■■■□□ 2.74
CDH23-208	ENST00000461841	BACH2	Q9BYV9	841 aa		32.18	■■■□□ 2.74
CDH23-208	ENST00000461841	NECTIN2	Q92692	538 aa		32.17	■■■□□ 2.74
CDH23-208	ENST00000461841	PHKG2	P15735	406 aa		32.16	■■■□□ 2.74
CDH23-208	ENST00000461841	COL5A2	P05997	1499 aa	Predicted RBP	32.16	■■■□□ 2.74
CDH23-208	ENST00000461841	ROBO1	Q9Y6N7	1651 aa		32.15	■■■□□ 2.74
CDH23-208	ENST00000461841	PDZRN3	Q9UPQ7	1066 aa		32.15	■■■□□ 2.74
CDH23-208	ENST00000461841	HOXB7	P09629	217 aa		32.14	■■■□□ 2.74
CDH23-208	ENST00000461841	HDGFL1	Q5TGJ6	251 aa		32.14	■■■□□ 2.74
CDH23-208	ENST00000461841	TOM1L2	Q6ZVM7	507 aa		32.13	■■■□□ 2.73
CDH23-208	ENST00000461841	IFNL2	Q8IZJ0	200 aa		32.13	■■■□□ 2.73
CDH23-208	ENST00000461841	C1orf115	Q9H7X2	142 aa		32.12	■■■□□ 2.73
CDH23-208	ENST00000461841	CACNA1F	O60840	1977 aa		32.12	■■■□□ 2.73
CDH23-208	ENST00000461841	SIPA1L3	O60292	1781 aa	Predicted RBP	32.12	■■■□□ 2.73
CDH23-208	ENST00000461841	FLII	Q13045	1269 aa		32.12	■■■□□ 2.73
CDH23-208	ENST00000461841	KDM6A	O15550	1401 aa	Predicted RBP	32.12	■■■□□ 2.73
CDH23-208	ENST00000461841	CYP27B1	O15528	508 aa		32.11	■■■□□ 2.73
CDH23-208	ENST00000461841	SMC5	Q8IY18	1101 aa		32.11	■■■□□ 2.73
CDH23-208	ENST00000461841	PKD1L3	Q7Z443	1732 aa		32.1	■■■□□ 2.73
CDH23-208	ENST00000461841		F6X3S4	739 aa		32.09	■■■□□ 2.73
CDH23-208	ENST00000461841	SCN11A	Q9UI33	1791 aa		32.09	■■■□□ 2.73
CDH23-208	ENST00000461841	SLC52A2	Q9HAB3	445 aa		32.08	■■■□□ 2.73
CDH23-208	ENST00000461841	HEG1	Q9ULI3	1381 aa		32.08	■■■□□ 2.73
CDH23-208	ENST00000461841	EIF2S2	P20042	333 aa	Known RBP	32.07	■■■□□ 2.72
CDH23-208	ENST00000461841	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.07	■■■□□ 2.72
CDH23-208	ENST00000461841	CARD10	Q9BWT7	1032 aa		32.07	■■■□□ 2.72
CDH23-208	ENST00000461841	CHMP4A	Q9BY43	222 aa		32.07	■■■□□ 2.72
CDH23-208	ENST00000461841	FKBP5	Q13451	457 aa	Predicted RBP	32.06	■■■□□ 2.72
CDH23-208	ENST00000461841	SIRT2	Q8IXJ6	389 aa		32.06	■■■□□ 2.72
CDH23-208	ENST00000461841	DCAF5	Q96JK2	942 aa		32.06	■■■□□ 2.72
CDH23-208	ENST00000461841	LARP1	Q6PKG0	1096 aa	Known RBP	32.05	■■■□□ 2.72
CDH23-208	ENST00000461841	SLC4A10	Q6U841	1118 aa		32.05	■■■□□ 2.72
CDH23-208	ENST00000461841	STRN4	Q9NRL3	753 aa		32.05	■■■□□ 2.72
CDH23-208	ENST00000461841	GIGYF1	O75420	1035 aa	Predicted RBP	32.04	■■■□□ 2.72
CDH23-208	ENST00000461841	CCT4	P50991	539 aa	Known RBP	32.04	■■■□□ 2.72
CDH23-208	ENST00000461841	EVA1C	P58658	441 aa		32.04	■■■□□ 2.72
CDH23-208	ENST00000461841	NFATC2IP	Q8NCF5	419 aa		32.04	■■■□□ 2.72
CDH23-208	ENST00000461841	FAM161A	Q3B820	660 aa		32.03	■■■□□ 2.72
CDH23-208	ENST00000461841	HSP90AB1	P08238	724 aa	Known RBP	32.02	■■■□□ 2.72
CDH23-208	ENST00000461841	C8orf34	Q49A92	452 aa		32.02	■■■□□ 2.72
CDH23-208	ENST00000461841	PHAX	Q9H814	394 aa	Known RBP	32.02	■■■□□ 2.72
CDH23-208	ENST00000461841	PARP4	Q9UKK3	1724 aa	Known RBP	32.01	■■■□□ 2.72
CDH23-208	ENST00000461841	MEIS3	Q99687	375 aa		32.01	■■■□□ 2.71
CDH23-208	ENST00000461841	CHPF2	Q9P2E5	772 aa		32.01	■■■□□ 2.71
CDH23-208	ENST00000461841	ZNF790	Q6PG37	636 aa		32	■■■□□ 2.71
CDH23-208	ENST00000461841	ZCRB1	Q8TBF4	217 aa	Known RBP	32	■■■□□ 2.71
CDH23-208	ENST00000461841	IL2RB	P14784	551 aa		31.99	■■■□□ 2.71
CDH23-208	ENST00000461841	SLC39A6	Q13433	755 aa		31.99	■■■□□ 2.71
CDH23-208	ENST00000461841	MRC1	P22897	1456 aa		31.98	■■■□□ 2.71
CDH23-208	ENST00000461841	NUCB1	Q02818	461 aa		31.97	■■■□□ 2.71
CDH23-208	ENST00000461841	BTG4	Q9NY30	223 aa		31.97	■■■□□ 2.71
CDH23-208	ENST00000461841	GCC1	Q96CN9	775 aa		31.97	■■■□□ 2.71
CDH23-208	ENST00000461841	PCDH11X	Q9BZA7	1347 aa		31.97	■■■□□ 2.71
CDH23-208	ENST00000461841	PCDH11Y	Q9BZA8	1340 aa		31.97	■■■□□ 2.71
CDH23-208	ENST00000461841	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.96	■■■□□ 2.71
CDH23-208	ENST00000461841	PRAMEF22	A3QJZ6	481 aa		31.96	■■■□□ 2.71
CDH23-208	ENST00000461841	DBF4	Q9UBU7	674 aa	Predicted RBP	31.95	■■■□□ 2.71
CDH23-208	ENST00000461841	ATP10D	Q9P241	1426 aa		31.95	■■■□□ 2.71
CDH23-208	ENST00000461841	RPAP2	Q8IXW5	612 aa	Predicted RBP	31.94	■■■□□ 2.7
CDH23-208	ENST00000461841	ANKRD44	Q8N8A2	993 aa		31.94	■■■□□ 2.7
CDH23-208	ENST00000461841	ANXA1	P04083	346 aa		31.92	■■■□□ 2.7
CDH23-208	ENST00000461841	CEP85	Q6P2H3	762 aa		31.92	■■■□□ 2.7
CDH23-208	ENST00000461841	PXDNL	A1KZ92	1463 aa		31.92	■■■□□ 2.7
CDH23-208	ENST00000461841	CABP4	P57796	275 aa		31.92	■■■□□ 2.7
CDH23-208	ENST00000461841	CHD1L	Q86WJ1	897 aa		31.91	■■■□□ 2.7
CDH23-208	ENST00000461841	USP35	Q9P2H5	1018 aa		31.9	■■■□□ 2.7
CDH23-208	ENST00000461841	COL14A1	Q05707	1796 aa	Known RBP	31.9	■■■□□ 2.7
CDH23-208	ENST00000461841	ZNF496	Q96IT1	587 aa	Predicted RBP	31.9	■■■□□ 2.7
CDH23-208	ENST00000461841	NKX1-1	Q15270	411 aa	Predicted RBP	31.89	■■■□□ 2.7
CDH23-208	ENST00000461841	LNPK	Q9C0E8	428 aa		31.88	■■■□□ 2.69
CDH23-208	ENST00000461841	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.88	■■■□□ 2.69
CDH23-208	ENST00000461841	PROSER3	Q2NL68	480 aa		31.88	■■■□□ 2.69
CDH23-208	ENST00000461841	ANKRD45	Q5TZF3	282 aa		31.88	■■■□□ 2.69
CDH23-208	ENST00000461841	DCTPP1	Q9H773	170 aa		31.88	■■■□□ 2.69
CDH23-208	ENST00000461841	COL16A1	Q07092	1604 aa	Predicted RBP	31.87	■■■□□ 2.69
CDH23-208	ENST00000461841	PI4KAP2	A4QPH2	592 aa		31.87	■■■□□ 2.69
CDH23-208	ENST00000461841	TTC5	Q8N0Z6	440 aa		31.87	■■■□□ 2.69
CDH23-208	ENST00000461841	PI4KAP1	Q8N8J0	262 aa		31.87	■■■□□ 2.69
CDH23-208	ENST00000461841	DDX54	Q8TDD1	881 aa	Known RBP	31.87	■■■□□ 2.69
CDH23-208	ENST00000461841	PHLPP1	O60346	1717 aa		31.86	■■■□□ 2.69
CDH23-208	ENST00000461841	TOM1	O60784	492 aa		31.86	■■■□□ 2.69
CDH23-208	ENST00000461841	ANP32A	P39687	249 aa	Known RBP	31.86	■■■□□ 2.69
CDH23-208	ENST00000461841	SHANK3	Q9BYB0	1731 aa		31.86	■■■□□ 2.69
CDH23-208	ENST00000461841	GNAI2	P04899	355 aa		31.85	■■■□□ 2.69
CDH23-208	ENST00000461841	GNAI3	P08754	354 aa		31.85	■■■□□ 2.69
CDH23-208	ENST00000461841	ERVV-2	B6SEH9	535 aa		31.85	■■■□□ 2.69
CDH23-208	ENST00000461841	DNAAF4	Q8WXU2	420 aa		31.84	■■■□□ 2.69
CDH23-208	ENST00000461841	USP44	Q9H0E7	712 aa		31.84	■■■□□ 2.69
CDH23-208	ENST00000461841	HYPK	Q9NX55	129 aa		31.84	■■■□□ 2.69
CDH23-208	ENST00000461841	PDIA6	Q15084	440 aa		31.83	■■■□□ 2.69
CDH23-208	ENST00000461841	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.83	■■■□□ 2.69
CDH23-208	ENST00000461841	ADCY9	O60503	1353 aa		31.83	■■■□□ 2.69
CDH23-208	ENST00000461841	C5	P01031	1676 aa		31.83	■■■□□ 2.69
CDH23-208	ENST00000461841	PIP4K2B	P78356	416 aa		31.83	■■■□□ 2.69
CDH23-208	ENST00000461841	NPM2	Q86SE8	214 aa	Known RBP	31.83	■■■□□ 2.69
CDH23-208	ENST00000461841	FMNL2	Q96PY5	1086 aa		31.82	■■■□□ 2.68
CDH23-208	ENST00000461841	SRCIN1	Q9C0H9	1055 aa		31.82	■■■□□ 2.68
CDH23-208	ENST00000461841	SNRPA1	P09661	255 aa	Known RBP	31.82	■■■□□ 2.68
CDH23-208	ENST00000461841	BEND3	Q5T5X7	828 aa		31.81	■■■□□ 2.68
CDH23-208	ENST00000461841	MSH5	O43196	834 aa		31.8	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms