RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 DPYDQ12882 1025 aa8.35□□□□□ -1.07
PRPF4B-202ENST00000461612 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
PRPF4B-202ENST00000461612 ARXQ96QS3 562 aa8.35□□□□□ -1.07
PRPF4B-202ENST00000461612 SENP2Q9HC62 589 aa8.35□□□□□ -1.07
PRPF4B-202ENST00000461612 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
PRPF4B-202ENST00000461612 HRH3Q9Y5N1 445 aa8.35□□□□□ -1.07
PRPF4B-202ENST00000461612 MEN1O00255 615 aa8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 CSB-PGBD3P0DP91 1061 aa8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 PURBQ96QR8 312 aaKnown RBP8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 ZNF358Q9NW07 568 aa8.34□□□□□ -1.07
PRPF4B-202ENST00000461612 BMP1P13497 986 aa8.33□□□□□ -1.08
PRPF4B-202ENST00000461612 SMTNP53814 917 aa8.33□□□□□ -1.08
PRPF4B-202ENST00000461612 RAB6BQ9NRW1 208 aa8.33□□□□□ -1.08
PRPF4B-202ENST00000461612 CENPCQ03188 943 aa8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 MTFR1Q15390 333 aa8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 INSM2Q96T92 566 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 DACH1Q9UI36 760 aa8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
PRPF4B-202ENST00000461612 SOS2Q07890 1332 aaPredicted RBP8.31□□□□□ -1.08
PRPF4B-202ENST00000461612 SFI1A8K8P3 1242 aa8.31□□□□□ -1.08
PRPF4B-202ENST00000461612 GTF2E1P29083 439 aaPredicted RBP8.31□□□□□ -1.08
PRPF4B-202ENST00000461612 FHDC1Q9C0D6 1143 aaPredicted RBP8.31□□□□□ -1.08
PRPF4B-202ENST00000461612 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
PRPF4B-202ENST00000461612 USTQ9Y2C2 406 aa8.31□□□□□ -1.08
PRPF4B-202ENST00000461612 A6NJY4 79 aa8.3□□□□□ -1.08
PRPF4B-202ENST00000461612 TTLL8A6PVC2 850 aa8.3□□□□□ -1.08
PRPF4B-202ENST00000461612 CDK2AP1O14519 115 aa8.3□□□□□ -1.08
PRPF4B-202ENST00000461612 STAU1O95793 577 aaKnown RBP8.3□□□□□ -1.08
PRPF4B-202ENST00000461612 CTSOP43234 321 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-202ENST00000461612 TLR1Q15399 786 aa8.3□□□□□ -1.08
PRPF4B-202ENST00000461612 ZSCAN10Q96SZ4 725 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-202ENST00000461612 LCE2BO14633 110 aa8.29□□□□□ -1.08
PRPF4B-202ENST00000461612 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
PRPF4B-202ENST00000461612 TMEM164Q5U3C3 297 aa8.29□□□□□ -1.08
PRPF4B-202ENST00000461612 FOXD4L5Q5VV16 416 aaPredicted RBP8.29□□□□□ -1.08
PRPF4B-202ENST00000461612 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-202ENST00000461612 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
PRPF4B-202ENST00000461612 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
PRPF4B-202ENST00000461612 SPATA31C2B4DYI2 1134 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 EPHA4P54764 986 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 WDR44Q5JSH3 913 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 LYSMD3Q7Z3D4 306 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 RNF217Q8TC41 542 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 STK32AQ8WU08 396 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 TRIM47Q96LD4 638 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 HINFPQ9BQA5 517 aa8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 SCHIP1Q9P0W5 487 aaPredicted RBP8.28□□□□□ -1.08
PRPF4B-202ENST00000461612 FAM69CQ0P6D2 419 aa8.27□□□□□ -1.09
PRPF4B-202ENST00000461612 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.09
PRPF4B-202ENST00000461612 TSEN2Q8NCE0 465 aaKnown RBP8.27□□□□□ -1.09
PRPF4B-202ENST00000461612 CLP1Q92989 425 aaKnown RBP8.27□□□□□ -1.09
PRPF4B-202ENST00000461612 GMPR2Q9P2T1 348 aaKnown RBP8.27□□□□□ -1.09
PRPF4B-202ENST00000461612 TMEM88BA6NKF7 163 aa8.26□□□□□ -1.09
PRPF4B-202ENST00000461612 FOXK2Q01167 660 aa8.26□□□□□ -1.09
PRPF4B-202ENST00000461612 GNASQ5JWF2 1037 aa8.26□□□□□ -1.09
PRPF4B-202ENST00000461612 TMEM214Q6NUQ4 689 aaKnown RBP8.26□□□□□ -1.09
PRPF4B-202ENST00000461612 TNS4Q8IZW8 715 aa8.26□□□□□ -1.09
PRPF4B-202ENST00000461612 RHBDD1Q8TEB9 315 aa8.26□□□□□ -1.09
PRPF4B-202ENST00000461612 MAN1A2O60476 641 aa8.25□□□□□ -1.09
PRPF4B-202ENST00000461612 IGFBP4P22692 258 aa8.25□□□□□ -1.09
PRPF4B-202ENST00000461612 STAG2Q8N3U4 1231 aa8.25□□□□□ -1.09
PRPF4B-202ENST00000461612 RETREG2Q8NC44 543 aa8.25□□□□□ -1.09
PRPF4B-202ENST00000461612 IQSEC3Q9UPP2 1182 aaPredicted RBP8.25□□□□□ -1.09
PRPF4B-202ENST00000461612 CCDC180Q9P1Z9 1646 aa8.25□□□□□ -1.09
PRPF4B-202ENST00000461612 ATAD2Q6PL18 1390 aa8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 TAS1R3Q7RTX0 852 aa8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 PRICKLE2Q7Z3G6 844 aa8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 SLC9A9Q8IVB4 645 aa8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 NIFKQ9BYG3 293 aaKnown RBP8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 DNMT3LQ9UJW3 386 aa8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 CHMP3Q9Y3E7 222 aa8.24□□□□□ -1.09
PRPF4B-202ENST00000461612 C11orf95C9JLR9 678 aaPredicted RBP8.23□□□□□ -1.09
PRPF4B-202ENST00000461612 WEE1P30291 646 aa8.23□□□□□ -1.09
PRPF4B-202ENST00000461612 PSMA6P60900 246 aaKnown RBP8.23□□□□□ -1.09
PRPF4B-202ENST00000461612 TEAD4Q15561 434 aa8.23□□□□□ -1.09
PRPF4B-202ENST00000461612 POU4F2Q12837 409 aa8.22□□□□□ -1.09
PRPF4B-202ENST00000461612 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
PRPF4B-202ENST00000461612 SCG3Q8WXD2 468 aaKnown RBP8.22□□□□□ -1.09
PRPF4B-202ENST00000461612 TSPAN10Q9H1Z9 355 aaPredicted RBP8.22□□□□□ -1.09
PRPF4B-202ENST00000461612 CABP1Q9NZU7 370 aa8.22□□□□□ -1.09
PRPF4B-202ENST00000461612 FOXO3O43524 673 aa8.21□□□□□ -1.1
PRPF4B-202ENST00000461612 C4orf17Q53FE4 359 aa8.21□□□□□ -1.1
PRPF4B-202ENST00000461612 B4GALNT3Q6L9W6 998 aa8.21□□□□□ -1.1
PRPF4B-202ENST00000461612 POTEAQ6S8J7 498 aa8.21□□□□□ -1.1
PRPF4B-202ENST00000461612 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
PRPF4B-202ENST00000461612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.21□□□□□ -1.1
PRPF4B-202ENST00000461612 C21orf2O43822 256 aa8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 SNRPBP14678 240 aaKnown RBP8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 NOS2P35228 1153 aa8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 HOMEZQ8IX15 550 aa8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms