RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ERVH48-1M5A8F1 160 aa5.52□□□□□ -1.53
HDAC6-212ENST00000461608 RNF217Q8TC41 542 aa5.52□□□□□ -1.53
HDAC6-212ENST00000461608 CUEDC1Q9NWM3 386 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-212ENST00000461608 MKL2Q9ULH7 1088 aa5.52□□□□□ -1.53
HDAC6-212ENST00000461608 PALM3A6NDB9 673 aaPredicted RBP5.51□□□□□ -1.53
HDAC6-212ENST00000461608 ESPNB1AK53 854 aa5.51□□□□□ -1.53
HDAC6-212ENST00000461608 H7C1W4 665 aa5.51□□□□□ -1.53
HDAC6-212ENST00000461608 PROCP04070 461 aa5.51□□□□□ -1.53
HDAC6-212ENST00000461608 FBXO45P0C2W1 286 aa5.51□□□□□ -1.53
HDAC6-212ENST00000461608 ATP9BO43861 1147 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 FURINP09958 794 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 CFAP70Q5T0N1 1121 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 LYSMD3Q7Z3D4 306 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 RETREG2Q8NC44 543 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 UCN2Q96RP3 112 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 RRAGCQ9HB90 399 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 LRRC4BQ9NT99 713 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 IGF1RP08069 1367 aa5.5□□□□□ -1.53
HDAC6-212ENST00000461608 LZTS3O60299 673 aaPredicted RBP5.49□□□□□ -1.53
HDAC6-212ENST00000461608 ADH1AP07327 375 aa5.49□□□□□ -1.53
HDAC6-212ENST00000461608 CSB-PGBD3P0DP91 1061 aa5.49□□□□□ -1.53
HDAC6-212ENST00000461608 RIPOR1Q6ZS17 1223 aa5.49□□□□□ -1.53
HDAC6-212ENST00000461608 CYLDQ9NQC7 956 aa5.49□□□□□ -1.53
HDAC6-212ENST00000461608 MAFBQ9Y5Q3 323 aaPredicted RBP5.49□□□□□ -1.53
HDAC6-212ENST00000461608 CCDC125Q86Z20 511 aa5.48□□□□□ -1.53
HDAC6-212ENST00000461608 PLEKHM2Q8IWE5 1019 aa5.48□□□□□ -1.53
HDAC6-212ENST00000461608 SCO2A0A1W2PP80 73 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 BTBD11A6QL63 1104 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 MX2P20592 715 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 LMOD1P29536 600 aaPredicted RBP5.47□□□□□ -1.53
HDAC6-212ENST00000461608 PTGIRP43119 386 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 GAS6Q14393 721 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 NBPF20Q3BBV1 942 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 B4GALNT3Q6L9W6 998 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 DZIP3Q86Y13 1208 aaKnown RBP5.47□□□□□ -1.53
HDAC6-212ENST00000461608 PODXL2Q9NZ53 605 aa5.47□□□□□ -1.53
HDAC6-212ENST00000461608 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.46□□□□□ -1.54
HDAC6-212ENST00000461608 GIGYF1O75420 1035 aaPredicted RBP5.46□□□□□ -1.54
HDAC6-212ENST00000461608 ATG7O95352 703 aa5.46□□□□□ -1.54
HDAC6-212ENST00000461608 RHOQP17081 205 aa5.46□□□□□ -1.54
HDAC6-212ENST00000461608 AMPD1P23109 780 aa5.46□□□□□ -1.54
HDAC6-212ENST00000461608 MAP2K3P46734 347 aa5.46□□□□□ -1.54
HDAC6-212ENST00000461608 ELOAQ14241 798 aaKnown RBP5.46□□□□□ -1.54
HDAC6-212ENST00000461608 SLFNL1Q499Z3 407 aa5.46□□□□□ -1.54
HDAC6-212ENST00000461608 TRIM22Q8IYM9 498 aa5.46□□□□□ -1.54
HDAC6-212ENST00000461608 TFIP11Q9UBB9 837 aaKnown RBP5.46□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L5A8MUK1 530 aa5.45□□□□□ -1.54
HDAC6-212ENST00000461608 RFX1P22670 979 aa5.45□□□□□ -1.54
HDAC6-212ENST00000461608 GRIN2CQ14957 1233 aa5.45□□□□□ -1.54
HDAC6-212ENST00000461608 MAP7D1Q3KQU3 841 aa5.45□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L3A6NCW0 530 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L4A6NCW7 530 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 FAM196BA6NMK8 535 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 ATP5J2-PTCD1G3V325 749 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 GPR25O00155 361 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 BRD1O95696 1058 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 SCTRP47872 440 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 SRPK2P78362 688 aaKnown RBP5.44□□□□□ -1.54
HDAC6-212ENST00000461608 KCNA1Q09470 495 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 ZMYM1Q5SVZ6 1142 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 RNF20Q5VTR2 975 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L2Q6R6M4 530 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 TBC1D9Q6ZT07 1266 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L1Q7RTZ2 530 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 PRICKLE2Q7Z3G6 844 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 VRTNQ9H8Y1 702 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 PCDHB9Q9Y5E1 797 aa5.44□□□□□ -1.54
HDAC6-212ENST00000461608 OIP5O43482 229 aa5.43□□□□□ -1.54
HDAC6-212ENST00000461608 SKIP12755 728 aa5.43□□□□□ -1.54
HDAC6-212ENST00000461608 TRIM26Q12899 539 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-212ENST00000461608 NBPF11Q86T75 865 aa5.43□□□□□ -1.54
HDAC6-212ENST00000461608 RNF135Q8IUD6 432 aa5.43□□□□□ -1.54
HDAC6-212ENST00000461608 SEPT12Q8IYM1 358 aa5.43□□□□□ -1.54
HDAC6-212ENST00000461608 ZNF837Q96EG3 531 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-212ENST00000461608 GAS2L1Q99501 681 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-212ENST00000461608 OXCT2Q9BYC2 517 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-212ENST00000461608 NOP53Q9NZM5 478 aaKnown RBP5.43□□□□□ -1.54
HDAC6-212ENST00000461608 CEP126Q9P2H0 1117 aa5.43□□□□□ -1.54
HDAC6-212ENST00000461608 PHF24Q9UPV7 400 aa5.43□□□□□ -1.54
HDAC6-212ENST00000461608 RNF144AP50876 292 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-212ENST00000461608 ATP1A2P50993 1020 aa5.42□□□□□ -1.54
HDAC6-212ENST00000461608 EML3Q32P44 896 aa5.42□□□□□ -1.54
HDAC6-212ENST00000461608 TRIM50Q86XT4 487 aa5.42□□□□□ -1.54
HDAC6-212ENST00000461608 PLPP7Q8NBV4 271 aa5.42□□□□□ -1.54
HDAC6-212ENST00000461608 ACDQ96AP0 544 aa5.42□□□□□ -1.54
HDAC6-212ENST00000461608 SIRT1Q96EB6 747 aa5.42□□□□□ -1.54
HDAC6-212ENST00000461608 GDF2Q9UK05 429 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-212ENST00000461608 CHIC2Q9UKJ5 165 aa5.42□□□□□ -1.54
HDAC6-212ENST00000461608 CCDC9Q9Y3X0 531 aaKnown RBP5.42□□□□□ -1.54
HDAC6-212ENST00000461608 A0A1W2PRU2 124 aa5.41□□□□□ -1.54
HDAC6-212ENST00000461608 KRBA1A5PL33 1030 aa5.41□□□□□ -1.54
HDAC6-212ENST00000461608 ITGB2P05107 769 aa5.41□□□□□ -1.54
HDAC6-212ENST00000461608 DBN1Q16643 649 aa5.41□□□□□ -1.54
HDAC6-212ENST00000461608 KRTAP1-3Q8IUG1 177 aa5.41□□□□□ -1.54
HDAC6-212ENST00000461608 GTPBP3Q969Y2 492 aaKnown RBP5.41□□□□□ -1.54
HDAC6-212ENST00000461608 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
HDAC6-212ENST00000461608 SEMA6BQ9H3T3 888 aa5.41□□□□□ -1.54
HDAC6-212ENST00000461608 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L15C9J2P7 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L10C9JJH3 530 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms