RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 ASXL1Q8IXJ9 1541 aa7.83□□□□□ -1.16
BRCA1-206ENST00000461574 TTC24A2A3L6 582 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-206ENST00000461574 HAP1P54257 671 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-206ENST00000461574 Q3C1V9 767 aa7.82□□□□□ -1.16
BRCA1-206ENST00000461574 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-206ENST00000461574 NUTM2DQ5VT03 806 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-206ENST00000461574 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
BRCA1-206ENST00000461574 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.82□□□□□ -1.16
BRCA1-206ENST00000461574 C19orf44Q9H6X5 657 aa7.82□□□□□ -1.16
BRCA1-206ENST00000461574 GMPR2Q9P2T1 348 aaKnown RBP7.82□□□□□ -1.16
BRCA1-206ENST00000461574 EP400Q96L91 3159 aa7.82□□□□□ -1.16
BRCA1-206ENST00000461574 RGS12O14924 1447 aa7.81□□□□□ -1.16
BRCA1-206ENST00000461574 MMP16P51512 607 aa7.81□□□□□ -1.16
BRCA1-206ENST00000461574 MAP2K5Q13163 448 aa7.81□□□□□ -1.16
BRCA1-206ENST00000461574 HLA-CQ95604 372 aa7.81□□□□□ -1.16
BRCA1-206ENST00000461574 C8orf37Q96NL8 207 aa7.81□□□□□ -1.16
BRCA1-206ENST00000461574 TBX22Q9Y458 520 aa7.81□□□□□ -1.16
BRCA1-206ENST00000461574 E9PCH4 1651 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 DCCP43146 1447 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 WNT7AO00755 349 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 KDM4AO75164 1064 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-206ENST00000461574 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-206ENST00000461574 TRIM32Q13049 653 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 CTC1Q2NKJ3 1217 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 BRINP3Q76B58 766 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
BRCA1-206ENST00000461574 PIK3R4Q99570 1358 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 UNC13BO14795 1591 aa7.8□□□□□ -1.16
BRCA1-206ENST00000461574 ADAMTS13Q76LX8 1427 aa7.79□□□□□ -1.16
BRCA1-206ENST00000461574 ANKRD50Q9ULJ7 1429 aa7.79□□□□□ -1.16
BRCA1-206ENST00000461574 XRN1Q8IZH2 1706 aaKnown RBP7.79□□□□□ -1.16
BRCA1-206ENST00000461574 IRF6O14896 467 aa7.79□□□□□ -1.16
BRCA1-206ENST00000461574 SMPD1P17405 629 aa7.79□□□□□ -1.16
BRCA1-206ENST00000461574 RBM6P78332 1123 aaKnown RBP7.79□□□□□ -1.16
BRCA1-206ENST00000461574 ATAD2Q6PL18 1390 aa7.79□□□□□ -1.16
BRCA1-206ENST00000461574 ADGRL2O95490 1459 aa7.79□□□□□ -1.16
BRCA1-206ENST00000461574 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
BRCA1-206ENST00000461574 NALCNQ8IZF0 1738 aa7.78□□□□□ -1.16
BRCA1-206ENST00000461574 C11orf95C9JLR9 678 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-206ENST00000461574 DXOO77932 396 aaKnown RBP7.78□□□□□ -1.16
BRCA1-206ENST00000461574 FAM50AQ14320 339 aaKnown RBP7.78□□□□□ -1.16
BRCA1-206ENST00000461574 SNIP1Q8TAD8 396 aaKnown RBP7.78□□□□□ -1.16
BRCA1-206ENST00000461574 LRRC59Q96AG4 307 aaKnown RBP7.78□□□□□ -1.16
BRCA1-206ENST00000461574 NGLY1Q96IV0 654 aa7.78□□□□□ -1.16
BRCA1-206ENST00000461574 MRGPRX2Q96LB1 330 aa7.78□□□□□ -1.16
BRCA1-206ENST00000461574 QTRT2Q9H974 415 aaKnown RBP7.78□□□□□ -1.16
BRCA1-206ENST00000461574 AMOTL2Q9Y2J4 779 aa7.78□□□□□ -1.16
BRCA1-206ENST00000461574 J3QL48 77 aa7.77□□□□□ -1.17
BRCA1-206ENST00000461574 ADAMTS2O95450 1211 aa7.77□□□□□ -1.17
BRCA1-206ENST00000461574 IQGAP3Q86VI3 1631 aa7.77□□□□□ -1.17
BRCA1-206ENST00000461574 MST1RQ04912 1400 aa7.77□□□□□ -1.17
BRCA1-206ENST00000461574 SPHKAPQ2M3C7 1700 aa7.76□□□□□ -1.17
BRCA1-206ENST00000461574 CCDC24Q8N4L8 307 aa7.76□□□□□ -1.17
BRCA1-206ENST00000461574 PNPLA6Q8IY17 1366 aa7.75□□□□□ -1.17
BRCA1-206ENST00000461574 NRXN3Q9Y4C0 1643 aa7.75□□□□□ -1.17
BRCA1-206ENST00000461574 HOXA2O43364 376 aa7.75□□□□□ -1.17
BRCA1-206ENST00000461574 USP46P62068 366 aa7.75□□□□□ -1.17
BRCA1-206ENST00000461574 GUCA2AQ02747 115 aa7.75□□□□□ -1.17
BRCA1-206ENST00000461574 PTPRUQ92729 1446 aa7.75□□□□□ -1.17
BRCA1-206ENST00000461574 SETBP1Q9Y6X0 1596 aa7.75□□□□□ -1.17
BRCA1-206ENST00000461574 MINK1Q8N4C8 1332 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-206ENST00000461574 SKOR1P84550 965 aa7.74□□□□□ -1.17
BRCA1-206ENST00000461574 ZNF326Q5BKZ1 582 aaKnown RBP7.74□□□□□ -1.17
BRCA1-206ENST00000461574 DDX17Q92841 729 aaKnown RBP7.74□□□□□ -1.17
BRCA1-206ENST00000461574 CCDC102AQ96A19 550 aa7.74□□□□□ -1.17
BRCA1-206ENST00000461574 ATP13A2Q9NQ11 1180 aa7.74□□□□□ -1.17
BRCA1-206ENST00000461574 USP21Q9UK80 565 aa7.74□□□□□ -1.17
BRCA1-206ENST00000461574 ADGRL3Q9HAR2 1447 aa7.74□□□□□ -1.17
BRCA1-206ENST00000461574 MARF1Q9Y4F3 1742 aaKnown RBP7.74□□□□□ -1.17
BRCA1-206ENST00000461574 LOC105371045A0A1W2PR82 267 aa7.73□□□□□ -1.17
BRCA1-206ENST00000461574 WFS1O76024 890 aa7.73□□□□□ -1.17
BRCA1-206ENST00000461574 SYMPKQ92797 1274 aaKnown RBP7.73□□□□□ -1.17
BRCA1-206ENST00000461574 HPS1Q92902 700 aa7.73□□□□□ -1.17
BRCA1-206ENST00000461574 TRPC5Q9UL62 973 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-206ENST00000461574 SNRPBP14678 240 aaKnown RBP7.72□□□□□ -1.17
BRCA1-206ENST00000461574 NFX1Q12986 1120 aaKnown RBP7.72□□□□□ -1.17
BRCA1-206ENST00000461574 RC3H1Q5TC82 1133 aaKnown RBP7.72□□□□□ -1.17
BRCA1-206ENST00000461574 KIF1BO60333 1816 aa7.72□□□□□ -1.17
BRCA1-206ENST00000461574 LAMC1P11047 1609 aa7.71□□□□□ -1.17
BRCA1-206ENST00000461574 COL22A1Q8NFW1 1626 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-206ENST00000461574 PTCH1Q13635 1447 aa7.71□□□□□ -1.17
BRCA1-206ENST00000461574 REPIN1Q9BWE0 567 aaKnown RBP7.71□□□□□ -1.18
BRCA1-206ENST00000461574 GPCPD1Q9NPB8 672 aa7.71□□□□□ -1.18
BRCA1-206ENST00000461574 FAM217BQ9NTX9 383 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-206ENST00000461574 NUP155O75694 1391 aa7.71□□□□□ -1.18
BRCA1-206ENST00000461574 METP08581 1390 aa7.71□□□□□ -1.18
BRCA1-206ENST00000461574 C1orf167Q5SNV9 1468 aa7.7□□□□□ -1.18
BRCA1-206ENST00000461574 TULP1O00294 542 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-206ENST00000461574 JUNDP17535 347 aa7.7□□□□□ -1.18
BRCA1-206ENST00000461574 WNT7BP56706 349 aa7.7□□□□□ -1.18
BRCA1-206ENST00000461574 ATRNO75882 1429 aa7.69□□□□□ -1.18
BRCA1-206ENST00000461574 CLCN1P35523 988 aa7.69□□□□□ -1.18
BRCA1-206ENST00000461574 CCDC125Q86Z20 511 aa7.69□□□□□ -1.18
BRCA1-206ENST00000461574 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.69□□□□□ -1.18
BRCA1-206ENST00000461574 NEXMIFQ5QGS0 1516 aa7.68□□□□□ -1.18
BRCA1-206ENST00000461574 CLTCL1P53675 1640 aa7.68□□□□□ -1.18
BRCA1-206ENST00000461574 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
BRCA1-206ENST00000461574 PTCRAQ6ISU1 281 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-206ENST00000461574 NUTM1Q86Y26 1132 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms