RNA–Protein interactions for RNA: ENST00000461544.2

PCBP4-204, Transcript of poly(rC) binding protein 4, humanhuman

TSL 4

Gene PCBP4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-204ENST00000461544 HTRA3P83110 453 aa17.6■□□□□ 0.41
PCBP4-204ENST00000461544 CC2D1BQ5T0F9 858 aaKnown RBP17.6■□□□□ 0.41
PCBP4-204ENST00000461544 NMRK2Q9NPI5 230 aa17.6■□□□□ 0.41
PCBP4-204ENST00000461544 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
PCBP4-204ENST00000461544 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
PCBP4-204ENST00000461544 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
PCBP4-204ENST00000461544 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
PCBP4-204ENST00000461544 CYP27B1O15528 508 aa17.59■□□□□ 0.41
PCBP4-204ENST00000461544 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
PCBP4-204ENST00000461544 EYA1Q99502 592 aa17.59■□□□□ 0.41
PCBP4-204ENST00000461544 CAPN15O75808 1086 aa17.58■□□□□ 0.4
PCBP4-204ENST00000461544 LINC00116Q8NCU8 138 aa17.58■□□□□ 0.4
PCBP4-204ENST00000461544 ITGB4P16144 1822 aa17.58■□□□□ 0.4
PCBP4-204ENST00000461544 PIGBQ92521 554 aa17.57■□□□□ 0.4
PCBP4-204ENST00000461544 SMARCC1Q92922 1105 aaPredicted RBP17.57■□□□□ 0.4
PCBP4-204ENST00000461544 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
PCBP4-204ENST00000461544 SSFA2P28290 1259 aa17.56■□□□□ 0.4
PCBP4-204ENST00000461544 BCS1LQ9Y276 419 aa17.56■□□□□ 0.4
PCBP4-204ENST00000461544 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
PCBP4-204ENST00000461544 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
PCBP4-204ENST00000461544 MMP10P09238 476 aa17.55■□□□□ 0.4
PCBP4-204ENST00000461544 N4BP2Q86UW6 1770 aaPredicted RBP17.55■□□□□ 0.4
PCBP4-204ENST00000461544 KIAA1551Q9HCM1 1747 aa17.55■□□□□ 0.4
PCBP4-204ENST00000461544 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
PCBP4-204ENST00000461544 SIK1P57059 783 aa17.54■□□□□ 0.4
PCBP4-204ENST00000461544 ARHGAP27Q6ZUM4 889 aa17.54■□□□□ 0.4
PCBP4-204ENST00000461544 KLRG1Q96E93 195 aa17.54■□□□□ 0.4
PCBP4-204ENST00000461544 SPG7Q9UQ90 795 aa17.54■□□□□ 0.4
PCBP4-204ENST00000461544 GNPATO15228 680 aa17.53■□□□□ 0.4
PCBP4-204ENST00000461544 MTHFSP49914 203 aa17.53■□□□□ 0.4
PCBP4-204ENST00000461544 ITPK1Q13572 414 aa17.53■□□□□ 0.4
PCBP4-204ENST00000461544 JMYQ8N9B5 988 aa17.53■□□□□ 0.4
PCBP4-204ENST00000461544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCBP4-204ENST00000461544 KIF13BQ9NQT8 1826 aa17.52■□□□□ 0.4
PCBP4-204ENST00000461544 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
PCBP4-204ENST00000461544 RBM46Q8TBY0 533 aaKnown RBP17.52■□□□□ 0.4
PCBP4-204ENST00000461544 COL3A1P02461 1466 aaPredicted RBP17.51■□□□□ 0.39
PCBP4-204ENST00000461544 TGFB2P61812 414 aa17.51■□□□□ 0.39
PCBP4-204ENST00000461544 KDRP35968 1356 aa17.51■□□□□ 0.39
PCBP4-204ENST00000461544 DPEP1P16444 411 aa17.5■□□□□ 0.39
PCBP4-204ENST00000461544 IL13P35225 146 aa17.5■□□□□ 0.39
PCBP4-204ENST00000461544 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
PCBP4-204ENST00000461544 ATP6V1AP38606 617 aa17.49■□□□□ 0.39
PCBP4-204ENST00000461544 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
PCBP4-204ENST00000461544 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
PCBP4-204ENST00000461544 FCHSD2O94868 740 aa17.48■□□□□ 0.39
PCBP4-204ENST00000461544 C9orf131Q5VYM1 1079 aa17.48■□□□□ 0.39
PCBP4-204ENST00000461544 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
PCBP4-204ENST00000461544 PRELPP51888 382 aa17.47■□□□□ 0.39
PCBP4-204ENST00000461544 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
PCBP4-204ENST00000461544 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
PCBP4-204ENST00000461544 C16orf71Q8IYS4 520 aaPredicted RBP17.47■□□□□ 0.39
PCBP4-204ENST00000461544 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
PCBP4-204ENST00000461544 KCNA3P22001 575 aa17.46■□□□□ 0.39
PCBP4-204ENST00000461544 FSTL1Q12841 308 aa17.46■□□□□ 0.39
PCBP4-204ENST00000461544 IFNL2Q8IZJ0 200 aa17.46■□□□□ 0.39
PCBP4-204ENST00000461544 TMOD3Q9NYL9 352 aa17.46■□□□□ 0.39
PCBP4-204ENST00000461544 PHKG2P15735 406 aa17.45■□□□□ 0.38
PCBP4-204ENST00000461544 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
PCBP4-204ENST00000461544 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
PCBP4-204ENST00000461544 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
PCBP4-204ENST00000461544 NLGN1Q8N2Q7 840 aa17.45■□□□□ 0.38
PCBP4-204ENST00000461544 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
PCBP4-204ENST00000461544 KCPQ6ZWJ8 1503 aa17.45■□□□□ 0.38
PCBP4-204ENST00000461544 CFAP53Q96M91 514 aa17.44■□□□□ 0.38
PCBP4-204ENST00000461544 RRAGCQ9HB90 399 aa17.44■□□□□ 0.38
PCBP4-204ENST00000461544 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
PCBP4-204ENST00000461544 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
PCBP4-204ENST00000461544 ARHGEF1Q92888 912 aaKnown RBP17.43■□□□□ 0.38
PCBP4-204ENST00000461544 SLC4A9Q96Q91 983 aa17.43■□□□□ 0.38
PCBP4-204ENST00000461544 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
PCBP4-204ENST00000461544 RTCBQ9Y3I0 505 aaKnown RBP17.43■□□□□ 0.38
PCBP4-204ENST00000461544 PCNTO95613 3336 aa17.42■□□□□ 0.38
PCBP4-204ENST00000461544 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
PCBP4-204ENST00000461544 GYS1P13807 737 aa17.42■□□□□ 0.38
PCBP4-204ENST00000461544 PPP2R1AP30153 589 aa17.42■□□□□ 0.38
PCBP4-204ENST00000461544 C4AP0C0L4 1744 aa17.41■□□□□ 0.38
PCBP4-204ENST00000461544 HMOX1P09601 288 aa17.41■□□□□ 0.38
PCBP4-204ENST00000461544 RNF181Q9P0P0 153 aa17.41■□□□□ 0.38
PCBP4-204ENST00000461544 KDM2BQ8NHM5 1336 aa17.41■□□□□ 0.38
PCBP4-204ENST00000461544 ARFGEF1Q9Y6D6 1849 aa17.4■□□□□ 0.38
PCBP4-204ENST00000461544 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
PCBP4-204ENST00000461544 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
PCBP4-204ENST00000461544 PARP3Q9Y6F1 533 aa17.4■□□□□ 0.38
PCBP4-204ENST00000461544 SCN11AQ9UI33 1791 aa17.39■□□□□ 0.37
PCBP4-204ENST00000461544 U2SURPO15042 1029 aaKnown RBP17.39■□□□□ 0.37
PCBP4-204ENST00000461544 DCAF5Q96JK2 942 aa17.39■□□□□ 0.37
PCBP4-204ENST00000461544 PIM2Q9P1W9 311 aa17.39■□□□□ 0.37
PCBP4-204ENST00000461544 RFC4P35249 363 aa17.37■□□□□ 0.37
PCBP4-204ENST00000461544 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
PCBP4-204ENST00000461544 SMC1BQ8NDV3 1235 aa17.37■□□□□ 0.37
PCBP4-204ENST00000461544 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
PCBP4-204ENST00000461544 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
PCBP4-204ENST00000461544 SBF1O95248 1867 aa17.37■□□□□ 0.37
PCBP4-204ENST00000461544 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
PCBP4-204ENST00000461544 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
PCBP4-204ENST00000461544 HSPA1AP0DMV8 641 aaKnown RBP17.36■□□□□ 0.37
PCBP4-204ENST00000461544 HSPA1BP0DMV9 641 aaKnown RBP17.36■□□□□ 0.37
PCBP4-204ENST00000461544 ADRA2BP18089 450 aa17.36■□□□□ 0.37
PCBP4-204ENST00000461544 CHRNA5P30532 468 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms