RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ARID5BQ14865 1188 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 VASH1Q7L8A9 365 aaPredicted RBP5.43□□□□□ -1.54
VCL-203ENST00000461383 SEPT12Q8IYM1 358 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 LARGE2Q8N3Y3 721 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 TRIM52Q96A61 297 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 KCTD15Q96SI1 283 aaPredicted RBP5.43□□□□□ -1.54
VCL-203ENST00000461383 CHIC2Q9UKJ5 165 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 EMILIN1Q9Y6C2 1016 aa5.43□□□□□ -1.54
VCL-203ENST00000461383 SWI5Q1ZZU3 235 aa5.42□□□□□ -1.54
VCL-203ENST00000461383 CCDC27Q2M243 656 aa5.42□□□□□ -1.54
VCL-203ENST00000461383 CCDC102BQ68D86 513 aa5.42□□□□□ -1.54
VCL-203ENST00000461383 CCDC116Q8IYX3 515 aa5.42□□□□□ -1.54
VCL-203ENST00000461383 TPCN2Q8NHX9 752 aa5.42□□□□□ -1.54
VCL-203ENST00000461383 SOBPA7XYQ1 873 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 MAN1A2O60476 641 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 UPP2O95045 317 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 ATP2B4P23634 1241 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 ARID4AP29374 1257 aaPredicted RBP5.41□□□□□ -1.54
VCL-203ENST00000461383 SEC13P55735 322 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 Q6ZVU0 165 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 SND1Q7KZF4 910 aaKnown RBP eCLIP5.41□□□□□ -1.54
VCL-203ENST00000461383 CLP1Q92989 425 aaKnown RBP5.41□□□□□ -1.54
VCL-203ENST00000461383 HINFPQ9BQA5 517 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 TSEN34Q9BSV6 310 aaKnown RBP5.41□□□□□ -1.54
VCL-203ENST00000461383 MTMR7Q9Y216 660 aa5.41□□□□□ -1.54
VCL-203ENST00000461383 ESPNB1AK53 854 aa5.4□□□□□ -1.54
VCL-203ENST00000461383 PPFIA3O75145 1194 aa5.4□□□□□ -1.54
VCL-203ENST00000461383 SSFA2P28290 1259 aa5.4□□□□□ -1.54
VCL-203ENST00000461383 SIX5Q8N196 739 aa5.4□□□□□ -1.54
VCL-203ENST00000461383 DNMT3LQ9UJW3 386 aa5.4□□□□□ -1.54
VCL-203ENST00000461383 KIAA1024Q9UPX6 916 aa5.4□□□□□ -1.54
VCL-203ENST00000461383 SFI1A8K8P3 1242 aa5.39□□□□□ -1.55
VCL-203ENST00000461383 PRMT3O60678 531 aa5.39□□□□□ -1.55
VCL-203ENST00000461383 BMP2P12643 396 aa5.39□□□□□ -1.55
VCL-203ENST00000461383 C6orf118Q5T5N4 469 aa5.39□□□□□ -1.55
VCL-203ENST00000461383 GNEQ9Y223 722 aaKnown RBP5.39□□□□□ -1.55
VCL-203ENST00000461383 ERVH48-1M5A8F1 160 aa5.38□□□□□ -1.55
VCL-203ENST00000461383 ZBTB7BO15156 539 aaPredicted RBP5.38□□□□□ -1.55
VCL-203ENST00000461383 SPINT1O43278 529 aa5.38□□□□□ -1.55
VCL-203ENST00000461383 DHX9Q08211 1270 aaKnown RBP5.38□□□□□ -1.55
VCL-203ENST00000461383 FAM69CQ0P6D2 419 aa5.38□□□□□ -1.55
VCL-203ENST00000461383 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.38□□□□□ -1.55
VCL-203ENST00000461383 INTS6LQ5JSJ4 861 aaKnown RBP5.38□□□□□ -1.55
VCL-203ENST00000461383 PRIMPOLQ96LW4 560 aa5.38□□□□□ -1.55
VCL-203ENST00000461383 PGPEP1Q9NXJ5 209 aa5.38□□□□□ -1.55
VCL-203ENST00000461383 PCDHGA11Q9Y5H2 935 aa5.38□□□□□ -1.55
VCL-203ENST00000461383 PPP1R26Q5T8A7 1209 aaPredicted RBP5.37□□□□□ -1.55
VCL-203ENST00000461383 FOXD4L5Q5VV16 416 aaPredicted RBP5.37□□□□□ -1.55
VCL-203ENST00000461383 CC2D2BQ6DHV5 1058 aa5.37□□□□□ -1.55
VCL-203ENST00000461383 TXNDC2Q86VQ3 553 aa5.37□□□□□ -1.55
VCL-203ENST00000461383 RGS22Q8NE09 1264 aa5.37□□□□□ -1.55
VCL-203ENST00000461383 FOXD4L4Q8WXT5 416 aaPredicted RBP5.37□□□□□ -1.55
VCL-203ENST00000461383 NANOS1Q8WY41 292 aaKnown RBP5.37□□□□□ -1.55
VCL-203ENST00000461383 BIN2Q9UBW5 565 aaPredicted RBP5.37□□□□□ -1.55
VCL-203ENST00000461383 TTLL8A6PVC2 850 aa5.36□□□□□ -1.55
VCL-203ENST00000461383 LGR5O75473 907 aa5.36□□□□□ -1.55
VCL-203ENST00000461383 ABL1P00519 1130 aa5.36□□□□□ -1.55
VCL-203ENST00000461383 PHLDB3Q6NSJ2 640 aa5.36□□□□□ -1.55
VCL-203ENST00000461383 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
VCL-203ENST00000461383 CYLDQ9NQC7 956 aa5.36□□□□□ -1.55
VCL-203ENST00000461383 CXXC1Q9P0U4 656 aaPredicted RBP5.36□□□□□ -1.55
VCL-203ENST00000461383 SLAIN2Q9P270 581 aa5.36□□□□□ -1.55
VCL-203ENST00000461383 DKK1O94907 266 aa5.35□□□□□ -1.55
VCL-203ENST00000461383 SCTRP47872 440 aa5.35□□□□□ -1.55
VCL-203ENST00000461383 SERPINB4P48594 390 aa5.35□□□□□ -1.55
VCL-203ENST00000461383 KRT76Q01546 638 aa5.35□□□□□ -1.55
VCL-203ENST00000461383 TSEN2Q8NCE0 465 aaKnown RBP5.35□□□□□ -1.55
VCL-203ENST00000461383 BACH1O14867 736 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 RBM25P49756 843 aaKnown RBP5.34□□□□□ -1.55
VCL-203ENST00000461383 ERVK-9P63128 1117 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 PTSQ03393 145 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 KCNMA1Q12791 1236 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 C1orf216Q8TAB5 229 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 VTI1AQ96AJ9 217 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 MKNK1Q9BUB5 465 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 TMPRSS4Q9NRS4 437 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 ZNF358Q9NW07 568 aa5.34□□□□□ -1.55
VCL-203ENST00000461383 SLC35F4A4IF30 521 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 SOWAHDA6NJG2 315 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 M0R2N6 131 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 SCNN1AP37088 669 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 GSK3AP49840 483 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 GDF10P55107 478 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 CBLBQ13191 982 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 CYP2U1Q7Z449 544 aa5.33□□□□□ -1.56
VCL-203ENST00000461383 ZNF784Q8NCA9 323 aaPredicted RBP5.33□□□□□ -1.56
VCL-203ENST00000461383 H3BRB1 525 aa5.32□□□□□ -1.56
VCL-203ENST00000461383 PTCD1O75127 700 aaKnown RBP5.32□□□□□ -1.56
VCL-203ENST00000461383 OCLNQ16625 522 aa5.32□□□□□ -1.56
VCL-203ENST00000461383 ESCO1Q5FWF5 840 aa5.32□□□□□ -1.56
VCL-203ENST00000461383 GLYCTKQ8IVS8 523 aa5.32□□□□□ -1.56
VCL-203ENST00000461383 CCDC155Q8N6L0 562 aa5.32□□□□□ -1.56
VCL-203ENST00000461383 GPR161Q8N6U8 529 aaKnown RBP5.32□□□□□ -1.56
VCL-203ENST00000461383 OSBPL3Q9H4L5 887 aa5.32□□□□□ -1.56
VCL-203ENST00000461383 TUT1Q9H6E5 874 aaKnown RBP5.32□□□□□ -1.56
VCL-203ENST00000461383 SERTAD1Q9UHV2 236 aa5.32□□□□□ -1.56
VCL-203ENST00000461383 TMEM229AB2RXF0 380 aa5.31□□□□□ -1.56
VCL-203ENST00000461383 ZNF211Q13398 564 aaPredicted RBP5.31□□□□□ -1.56
VCL-203ENST00000461383 TAS1R3Q7RTX0 852 aa5.31□□□□□ -1.56
VCL-203ENST00000461383 TNS4Q8IZW8 715 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms