RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 KDM2BQ8NHM5 1336 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 INSRP06213 1382 aa17.93■□□□□ 0.46
C9orf78-202ENST00000461349 C10orf71Q711Q0 1435 aa17.93■□□□□ 0.46
C9orf78-202ENST00000461349 ATP6V1AP38606 617 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 C9orf131Q5VYM1 1079 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 CCDC87Q9NVE4 849 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 TMOD3Q9NYL9 352 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 PCNTO95613 3336 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 SBF1O95248 1867 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
C9orf78-202ENST00000461349 FLT4P35916 1363 aa17.91■□□□□ 0.46
C9orf78-202ENST00000461349 DPEP1P16444 411 aa17.9■□□□□ 0.46
C9orf78-202ENST00000461349 TMF1P82094 1093 aa17.9■□□□□ 0.46
C9orf78-202ENST00000461349 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
C9orf78-202ENST00000461349 SPG7Q9UQ90 795 aa17.9■□□□□ 0.46
C9orf78-202ENST00000461349 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
C9orf78-202ENST00000461349 ITPK1Q13572 414 aa17.89■□□□□ 0.45
C9orf78-202ENST00000461349 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.45
C9orf78-202ENST00000461349 TRAPPC3LQ5T215 181 aa17.89■□□□□ 0.45
C9orf78-202ENST00000461349 GGNBP2Q9H3C7 697 aa17.89■□□□□ 0.45
C9orf78-202ENST00000461349 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
C9orf78-202ENST00000461349 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.45
C9orf78-202ENST00000461349 ZNF831Q5JPB2 1677 aa17.88■□□□□ 0.45
C9orf78-202ENST00000461349 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
C9orf78-202ENST00000461349 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
C9orf78-202ENST00000461349 RRAGCQ9HB90 399 aa17.87■□□□□ 0.45
C9orf78-202ENST00000461349 RNF181Q9P0P0 153 aa17.87■□□□□ 0.45
C9orf78-202ENST00000461349 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
C9orf78-202ENST00000461349 FYB1O15117 783 aa17.86■□□□□ 0.45
C9orf78-202ENST00000461349 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
C9orf78-202ENST00000461349 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
C9orf78-202ENST00000461349 ADRA2BP18089 450 aa17.85■□□□□ 0.45
C9orf78-202ENST00000461349 RFC4P35249 363 aa17.84■□□□□ 0.45
C9orf78-202ENST00000461349 DALRD3Q5D0E6 543 aaKnown RBP17.84■□□□□ 0.45
C9orf78-202ENST00000461349 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
C9orf78-202ENST00000461349 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
C9orf78-202ENST00000461349 ANKRD26Q9UPS8 1709 aa17.82■□□□□ 0.44
C9orf78-202ENST00000461349 GYS1P13807 737 aa17.82■□□□□ 0.44
C9orf78-202ENST00000461349 IFNL2Q8IZJ0 200 aa17.82■□□□□ 0.44
C9orf78-202ENST00000461349 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
C9orf78-202ENST00000461349 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
C9orf78-202ENST00000461349 ATG3Q9NT62 314 aa17.82■□□□□ 0.44
C9orf78-202ENST00000461349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.44
C9orf78-202ENST00000461349 CCDC88AQ3V6T2 1871 aa17.82■□□□□ 0.44
C9orf78-202ENST00000461349 NCAPD2Q15021 1401 aa17.81■□□□□ 0.44
C9orf78-202ENST00000461349 KCNA3P22001 575 aa17.81■□□□□ 0.44
C9orf78-202ENST00000461349 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
C9orf78-202ENST00000461349 KDRP35968 1356 aa17.8■□□□□ 0.44
C9orf78-202ENST00000461349 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
C9orf78-202ENST00000461349 TESK2Q96S53 571 aa17.8■□□□□ 0.44
C9orf78-202ENST00000461349 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
C9orf78-202ENST00000461349 TIAM2Q8IVF5 1701 aa17.8■□□□□ 0.44
C9orf78-202ENST00000461349 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
C9orf78-202ENST00000461349 PHKG2P15735 406 aa17.79■□□□□ 0.44
C9orf78-202ENST00000461349 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
C9orf78-202ENST00000461349 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
C9orf78-202ENST00000461349 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
C9orf78-202ENST00000461349 RPS6KA4O75676 772 aa17.78■□□□□ 0.44
C9orf78-202ENST00000461349 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
C9orf78-202ENST00000461349 TONSLQ96HA7 1378 aa17.78■□□□□ 0.44
C9orf78-202ENST00000461349 VEGFAP15692 232 aaPredicted RBP17.76■□□□□ 0.43
C9orf78-202ENST00000461349 DLEC1Q9Y238 1755 aa17.74■□□□□ 0.43
C9orf78-202ENST00000461349 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
C9orf78-202ENST00000461349 GLTPD2A6NH11 291 aa17.73■□□□□ 0.43
C9orf78-202ENST00000461349 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
C9orf78-202ENST00000461349 CHRNA5P30532 468 aa17.73■□□□□ 0.43
C9orf78-202ENST00000461349 EYA1Q99502 592 aa17.73■□□□□ 0.43
C9orf78-202ENST00000461349 AFDNP55196 1824 aaKnown RBP17.72■□□□□ 0.43
C9orf78-202ENST00000461349 LMNB1P20700 586 aa17.72■□□□□ 0.43
C9orf78-202ENST00000461349 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
C9orf78-202ENST00000461349 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
C9orf78-202ENST00000461349 USP42Q9H9J4 1324 aaKnown RBP17.72■□□□□ 0.43
C9orf78-202ENST00000461349 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
C9orf78-202ENST00000461349 RASSF7Q02833 373 aa17.71■□□□□ 0.43
C9orf78-202ENST00000461349 DDR1Q08345 913 aa17.7■□□□□ 0.42
C9orf78-202ENST00000461349 FKBP8Q14318 412 aa17.7■□□□□ 0.42
C9orf78-202ENST00000461349 SRP68Q9UHB9 627 aaKnown RBP17.7■□□□□ 0.42
C9orf78-202ENST00000461349 TJP1Q07157 1748 aa17.69■□□□□ 0.42
C9orf78-202ENST00000461349 DICER1Q9UPY3 1922 aaKnown RBP17.69■□□□□ 0.42
C9orf78-202ENST00000461349 CRKLP46109 303 aaKnown RBP17.68■□□□□ 0.42
C9orf78-202ENST00000461349 CABP4P57796 275 aa17.68■□□□□ 0.42
C9orf78-202ENST00000461349 CDCA8Q53HL2 280 aa17.68■□□□□ 0.42
C9orf78-202ENST00000461349 POLRMTO00411 1230 aaKnown RBP17.67■□□□□ 0.42
C9orf78-202ENST00000461349 PTCD1O75127 700 aaKnown RBP17.67■□□□□ 0.42
C9orf78-202ENST00000461349 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
C9orf78-202ENST00000461349 ZPR1O75312 459 aa17.66■□□□□ 0.42
C9orf78-202ENST00000461349 SLC34A2O95436 690 aa17.66■□□□□ 0.42
C9orf78-202ENST00000461349 DPY19L2Q6NUT2 758 aa17.66■□□□□ 0.42
C9orf78-202ENST00000461349 NRXN2Q9P2S2 1712 aa17.66■□□□□ 0.42
C9orf78-202ENST00000461349 CREBZFQ9NS37 354 aa17.65■□□□□ 0.42
C9orf78-202ENST00000461349 TM4SF1P30408 202 aa17.64■□□□□ 0.41
C9orf78-202ENST00000461349 PLEKHO1Q53GL0 409 aaPredicted RBP17.64■□□□□ 0.41
C9orf78-202ENST00000461349 MKRN1Q9UHC7 482 aaKnown RBP17.64■□□□□ 0.41
C9orf78-202ENST00000461349 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
C9orf78-202ENST00000461349 SCN11AQ9UI33 1791 aa17.62■□□□□ 0.41
C9orf78-202ENST00000461349 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
C9orf78-202ENST00000461349 USPL1Q5W0Q7 1092 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms