RNA–Protein interactions for RNA: ENST00000460841.1

C4A-245, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-245ENST00000460841 KDM6AO15550 1401 aaPredicted RBP21.28■■□□□ 1
C4A-245ENST00000460841 C4BP0C0L5 1744 aa21.27■■□□□ 1
C4A-245ENST00000460841 HMOX1P09601 288 aa21.27■■□□□ 1
C4A-245ENST00000460841 ATP6V1AP38606 617 aa21.27■■□□□ 1
C4A-245ENST00000460841 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
C4A-245ENST00000460841 COL24A1Q17RW2 1714 aa21.26■□□□□ 0.99
C4A-245ENST00000460841 HMGB2P26583 209 aaKnown RBP21.26■□□□□ 0.99
C4A-245ENST00000460841 GPR162Q16538 588 aa21.26■□□□□ 0.99
C4A-245ENST00000460841 MAP3K5Q99683 1374 aa21.25■□□□□ 0.99
C4A-245ENST00000460841 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
C4A-245ENST00000460841 PHF14O94880 888 aa21.25■□□□□ 0.99
C4A-245ENST00000460841 CABP4P57796 275 aa21.25■□□□□ 0.99
C4A-245ENST00000460841 FLAD1Q8NFF5 587 aa21.25■□□□□ 0.99
C4A-245ENST00000460841 DIAPH1O60610 1272 aaKnown RBP21.24■□□□□ 0.99
C4A-245ENST00000460841 SLC4A9Q96Q91 983 aa21.24■□□□□ 0.99
C4A-245ENST00000460841 RBM42Q9BTD8 480 aaKnown RBP21.24■□□□□ 0.99
C4A-245ENST00000460841 CHD4Q14839 1912 aa21.23■□□□□ 0.99
C4A-245ENST00000460841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.23■□□□□ 0.99
C4A-245ENST00000460841 NFATC2IPQ8NCF5 419 aa21.23■□□□□ 0.99
C4A-245ENST00000460841 UBR3Q6ZT12 1888 aa21.21■□□□□ 0.99
C4A-245ENST00000460841 GNPATO15228 680 aa21.2■□□□□ 0.98
C4A-245ENST00000460841 AKAP4Q5JQC9 854 aa21.2■□□□□ 0.98
C4A-245ENST00000460841 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
C4A-245ENST00000460841 NLGN2Q8NFZ4 835 aa21.2■□□□□ 0.98
C4A-245ENST00000460841 LGR6Q9HBX8 967 aa21.2■□□□□ 0.98
C4A-245ENST00000460841 GOLGB1Q14789 3259 aaKnown RBP21.19■□□□□ 0.98
C4A-245ENST00000460841 PTCD1O75127 700 aaKnown RBP21.18■□□□□ 0.98
C4A-245ENST00000460841 SSFA2P28290 1259 aa21.18■□□□□ 0.98
C4A-245ENST00000460841 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
C4A-245ENST00000460841 U2SURPO15042 1029 aaKnown RBP21.17■□□□□ 0.98
C4A-245ENST00000460841 COL3A1P02461 1466 aaPredicted RBP21.17■□□□□ 0.98
C4A-245ENST00000460841 SCN11AQ9UI33 1791 aa21.15■□□□□ 0.98
C4A-245ENST00000460841 RNMTO43148 476 aaKnown RBP21.14■□□□□ 0.97
C4A-245ENST00000460841 SLC52A2Q9HAB3 445 aa21.13■□□□□ 0.97
C4A-245ENST00000460841 RTCBQ9Y3I0 505 aaKnown RBP21.13■□□□□ 0.97
C4A-245ENST00000460841 C1QTNF8P60827 252 aa21.12■□□□□ 0.97
C4A-245ENST00000460841 TRAPPC3LQ5T215 181 aa21.12■□□□□ 0.97
C4A-245ENST00000460841 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
C4A-245ENST00000460841 ZNF831Q5JPB2 1677 aa21.12■□□□□ 0.97
C4A-245ENST00000460841 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
C4A-245ENST00000460841 SLC39A6Q13433 755 aa21.11■□□□□ 0.97
C4A-245ENST00000460841 MYH14Q7Z406 1995 aaKnown RBP21.1■□□□□ 0.97
C4A-245ENST00000460841 CNTNAP4Q9C0A0 1308 aa21.1■□□□□ 0.97
C4A-245ENST00000460841 RPS6KA4O75676 772 aa21.1■□□□□ 0.97
C4A-245ENST00000460841 ARHGEF1Q92888 912 aaKnown RBP21.1■□□□□ 0.97
C4A-245ENST00000460841 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
C4A-245ENST00000460841 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
C4A-245ENST00000460841 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
C4A-245ENST00000460841 CD2APQ9Y5K6 639 aa21.09■□□□□ 0.97
C4A-245ENST00000460841 VIRMAQ69YN4 1812 aaKnown RBP21.08■□□□□ 0.97
C4A-245ENST00000460841 GRIN3BO60391 1043 aa21.08■□□□□ 0.97
C4A-245ENST00000460841 CRKLP46109 303 aaKnown RBP21.08■□□□□ 0.97
C4A-245ENST00000460841 YBX3P16989 372 aaKnown RBP eCLIP21.07■□□□□ 0.96
C4A-245ENST00000460841 DNAJC10Q8IXB1 793 aa21.07■□□□□ 0.96
C4A-245ENST00000460841 MMP10P09238 476 aa21.06■□□□□ 0.96
C4A-245ENST00000460841 RFC4P35249 363 aa21.06■□□□□ 0.96
C4A-245ENST00000460841 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
C4A-245ENST00000460841 MRC1P22897 1456 aa21.06■□□□□ 0.96
C4A-245ENST00000460841 TJP1Q07157 1748 aa21.05■□□□□ 0.96
C4A-245ENST00000460841 ADRA2BP18089 450 aa21.05■□□□□ 0.96
C4A-245ENST00000460841 PRKAR2BP31323 418 aa21.05■□□□□ 0.96
C4A-245ENST00000460841 INTS5Q6P9B9 1019 aaKnown RBP21.05■□□□□ 0.96
C4A-245ENST00000460841 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
C4A-245ENST00000460841 GAS2L2Q8NHY3 880 aa21.05■□□□□ 0.96
C4A-245ENST00000460841 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
C4A-245ENST00000460841 GNAT3A8MTJ3 354 aa21.04■□□□□ 0.96
C4A-245ENST00000460841 GIGYF1O75420 1035 aaPredicted RBP21.04■□□□□ 0.96
C4A-245ENST00000460841 GYS1P13807 737 aa21.04■□□□□ 0.96
C4A-245ENST00000460841 NUDCQ9Y266 331 aa21.04■□□□□ 0.96
C4A-245ENST00000460841 ADAMTS7Q9UKP4 1686 aa21.04■□□□□ 0.96
C4A-245ENST00000460841 U2AF1L5P0DN76 240 aaPredicted RBP21.03■□□□□ 0.96
C4A-245ENST00000460841 U2AF1Q01081 240 aaKnown RBP eCLIP21.03■□□□□ 0.96
C4A-245ENST00000460841 NLGN1Q8N2Q7 840 aa21.03■□□□□ 0.96
C4A-245ENST00000460841 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
C4A-245ENST00000460841 SRP68Q9UHB9 627 aaKnown RBP21.02■□□□□ 0.96
C4A-245ENST00000460841 CYP19A1P11511 503 aaPredicted RBP21.01■□□□□ 0.95
C4A-245ENST00000460841 KCPQ6ZWJ8 1503 aa21■□□□□ 0.95
C4A-245ENST00000460841 TEFQ10587 303 aa21■□□□□ 0.95
C4A-245ENST00000460841 CCDC87Q9NVE4 849 aa21■□□□□ 0.95
C4A-245ENST00000460841 C4AP0C0L4 1744 aa20.99■□□□□ 0.95
C4A-245ENST00000460841 CICQ96RK0 1608 aaPredicted RBP20.99■□□□□ 0.95
C4A-245ENST00000460841 FKBP8Q14318 412 aa20.98■□□□□ 0.95
C4A-245ENST00000460841 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
C4A-245ENST00000460841 FCHSD2O94868 740 aa20.97■□□□□ 0.95
C4A-245ENST00000460841 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
C4A-245ENST00000460841 VSIG10Q8N0Z9 540 aa20.97■□□□□ 0.95
C4A-245ENST00000460841 ZNF790Q6PG37 636 aa20.96■□□□□ 0.95
C4A-245ENST00000460841 ZNF496Q96IT1 587 aaPredicted RBP20.96■□□□□ 0.95
C4A-245ENST00000460841 ZBTB1Q9Y2K1 713 aa20.96■□□□□ 0.95
C4A-245ENST00000460841 SOS1Q07889 1333 aaPredicted RBP20.96■□□□□ 0.95
C4A-245ENST00000460841 PARP3Q9Y6F1 533 aa20.95■□□□□ 0.94
C4A-245ENST00000460841 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.94
C4A-245ENST00000460841 KCNQ3O43525 872 aa20.94■□□□□ 0.94
C4A-245ENST00000460841 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
C4A-245ENST00000460841 USPL1Q5W0Q7 1092 aa20.94■□□□□ 0.94
C4A-245ENST00000460841 UBR2Q8IWV8 1755 aa20.94■□□□□ 0.94
C4A-245ENST00000460841 A0A0G2JLW4 131 aa20.93■□□□□ 0.94
C4A-245ENST00000460841 DDR1Q08345 913 aa20.93■□□□□ 0.94
C4A-245ENST00000460841 MCM10Q7L590 875 aa20.93■□□□□ 0.94
C4A-245ENST00000460841 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms