RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 RLBP1P12271 317 aa17.9■□□□□ 0.46
ERCC3-205ENST00000460485 HDAC1Q13547 482 aaPredicted RBP17.9■□□□□ 0.46
ERCC3-205ENST00000460485 TWISTNBQ3B726 338 aaPredicted RBP17.9■□□□□ 0.46
ERCC3-205ENST00000460485 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
ERCC3-205ENST00000460485 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
ERCC3-205ENST00000460485 BCL2L13Q9BXK5 485 aa17.9■□□□□ 0.46
ERCC3-205ENST00000460485 CRB1P82279 1406 aa17.89■□□□□ 0.46
ERCC3-205ENST00000460485 NCAPD2Q15021 1401 aa17.89■□□□□ 0.46
ERCC3-205ENST00000460485 CHL1O00533 1208 aa17.89■□□□□ 0.45
ERCC3-205ENST00000460485 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
ERCC3-205ENST00000460485 NOB1Q9ULX3 412 aaKnown RBP17.89■□□□□ 0.45
ERCC3-205ENST00000460485 RREB1Q92766 1687 aa17.89■□□□□ 0.45
ERCC3-205ENST00000460485 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
ERCC3-205ENST00000460485 MRPL50Q8N5N7 158 aaKnown RBP17.88■□□□□ 0.45
ERCC3-205ENST00000460485 IP6K1Q92551 441 aa17.88■□□□□ 0.45
ERCC3-205ENST00000460485 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
ERCC3-205ENST00000460485 USP19O94966 1318 aa17.88■□□□□ 0.45
ERCC3-205ENST00000460485 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
ERCC3-205ENST00000460485 BARGINQ6ZT62 677 aa17.87■□□□□ 0.45
ERCC3-205ENST00000460485 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
ERCC3-205ENST00000460485 EYA1Q99502 592 aa17.87■□□□□ 0.45
ERCC3-205ENST00000460485 PRDM11Q9NQV5 511 aa17.87■□□□□ 0.45
ERCC3-205ENST00000460485 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
ERCC3-205ENST00000460485 ABCC4O15439 1325 aa17.87■□□□□ 0.45
ERCC3-205ENST00000460485 PTPRCP08575 1304 aa17.86■□□□□ 0.45
ERCC3-205ENST00000460485 MAP3K5Q99683 1374 aa17.86■□□□□ 0.45
ERCC3-205ENST00000460485 NUP188Q5SRE5 1749 aa17.86■□□□□ 0.45
ERCC3-205ENST00000460485 ERICH6Q7L0X2 663 aa17.85■□□□□ 0.45
ERCC3-205ENST00000460485 ZNF784Q8NCA9 323 aaPredicted RBP17.84■□□□□ 0.45
ERCC3-205ENST00000460485 DDRGK1Q96HY6 314 aa17.84■□□□□ 0.45
ERCC3-205ENST00000460485 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
ERCC3-205ENST00000460485 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.44
ERCC3-205ENST00000460485 IGHDP01880 384 aa17.83■□□□□ 0.44
ERCC3-205ENST00000460485 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
ERCC3-205ENST00000460485 IPO9Q96P70 1041 aaKnown RBP17.83■□□□□ 0.44
ERCC3-205ENST00000460485 ZBTB40Q9NUA8 1239 aa17.83■□□□□ 0.44
ERCC3-205ENST00000460485 CRYBG1Q9Y4K1 1723 aa17.82■□□□□ 0.44
ERCC3-205ENST00000460485 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
ERCC3-205ENST00000460485 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
ERCC3-205ENST00000460485 PCDHB15Q9Y5E8 787 aa17.82■□□□□ 0.44
ERCC3-205ENST00000460485 SOX12O15370 315 aa17.81■□□□□ 0.44
ERCC3-205ENST00000460485 MTHFSDQ2M296 383 aaKnown RBP17.81■□□□□ 0.44
ERCC3-205ENST00000460485 RGPD2P0DJD1 1756 aa17.81■□□□□ 0.44
ERCC3-205ENST00000460485 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
ERCC3-205ENST00000460485 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
ERCC3-205ENST00000460485 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
ERCC3-205ENST00000460485 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
ERCC3-205ENST00000460485 PXDNLA1KZ92 1463 aa17.79■□□□□ 0.44
ERCC3-205ENST00000460485 PLSCR1O15162 318 aa17.78■□□□□ 0.44
ERCC3-205ENST00000460485 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
ERCC3-205ENST00000460485 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
ERCC3-205ENST00000460485 TNNQ9UQP3 1299 aa17.78■□□□□ 0.44
ERCC3-205ENST00000460485 THRAP3Q9Y2W1 955 aaKnown RBP17.78■□□□□ 0.44
ERCC3-205ENST00000460485 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
ERCC3-205ENST00000460485 UTRNP46939 3433 aa17.78■□□□□ 0.44
ERCC3-205ENST00000460485 EVA1CP58658 441 aa17.77■□□□□ 0.44
ERCC3-205ENST00000460485 C8orf34Q49A92 452 aa17.77■□□□□ 0.44
ERCC3-205ENST00000460485 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.44
ERCC3-205ENST00000460485 TSPYL6Q8N831 410 aa17.77■□□□□ 0.44
ERCC3-205ENST00000460485 GCC1Q96CN9 775 aa17.77■□□□□ 0.44
ERCC3-205ENST00000460485 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
ERCC3-205ENST00000460485 CEMIPQ8WUJ3 1361 aa17.77■□□□□ 0.43
ERCC3-205ENST00000460485 RGS3P49796 1198 aa17.76■□□□□ 0.43
ERCC3-205ENST00000460485 C1QTNF8P60827 252 aa17.76■□□□□ 0.43
ERCC3-205ENST00000460485 CHRNA2Q15822 529 aa17.76■□□□□ 0.43
ERCC3-205ENST00000460485 INTS3Q68E01 1043 aaKnown RBP17.76■□□□□ 0.43
ERCC3-205ENST00000460485 MCM10Q7L590 875 aa17.76■□□□□ 0.43
ERCC3-205ENST00000460485 SIPA1L3O60292 1781 aaPredicted RBP17.76■□□□□ 0.43
ERCC3-205ENST00000460485 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
ERCC3-205ENST00000460485 GCP02774 474 aa17.75■□□□□ 0.43
ERCC3-205ENST00000460485 HOXB7P09629 217 aa17.75■□□□□ 0.43
ERCC3-205ENST00000460485 DCTN1Q14203 1278 aa17.75■□□□□ 0.43
ERCC3-205ENST00000460485 USP35Q9P2H5 1018 aa17.75■□□□□ 0.43
ERCC3-205ENST00000460485 PDZRN3Q9UPQ7 1066 aa17.75■□□□□ 0.43
ERCC3-205ENST00000460485 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
ERCC3-205ENST00000460485 COL18A1P39060 1754 aa17.74■□□□□ 0.43
ERCC3-205ENST00000460485 ZBTB7BO15156 539 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-205ENST00000460485 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
ERCC3-205ENST00000460485 CHD4Q14839 1912 aa17.74■□□□□ 0.43
ERCC3-205ENST00000460485 ZC3H6P61129 1189 aaKnown RBP17.73■□□□□ 0.43
ERCC3-205ENST00000460485 TAF7Q15545 349 aaPredicted RBP17.73■□□□□ 0.43
ERCC3-205ENST00000460485 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
ERCC3-205ENST00000460485 STK31Q9BXU1 1019 aa17.73■□□□□ 0.43
ERCC3-205ENST00000460485 ZBTB47Q9UFB7 747 aaPredicted RBP17.73■□□□□ 0.43
ERCC3-205ENST00000460485 RGPD3A6NKT7 1758 aaPredicted RBP17.73■□□□□ 0.43
ERCC3-205ENST00000460485 RGPD4Q7Z3J3 1758 aa17.73■□□□□ 0.43
ERCC3-205ENST00000460485 MSH5O43196 834 aa17.72■□□□□ 0.43
ERCC3-205ENST00000460485 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
ERCC3-205ENST00000460485 PTGER2P43116 358 aa17.71■□□□□ 0.43
ERCC3-205ENST00000460485 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
ERCC3-205ENST00000460485 AKAP4Q5JQC9 854 aa17.71■□□□□ 0.43
ERCC3-205ENST00000460485 LARP1Q6PKG0 1096 aaKnown RBP17.71■□□□□ 0.43
ERCC3-205ENST00000460485 UPF2Q9HAU5 1272 aaKnown RBP17.71■□□□□ 0.43
ERCC3-205ENST00000460485 PKD1L3Q7Z443 1732 aa17.71■□□□□ 0.43
ERCC3-205ENST00000460485 PARP4Q9UKK3 1724 aaKnown RBP17.71■□□□□ 0.43
ERCC3-205ENST00000460485 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
ERCC3-205ENST00000460485 SCN11AQ9UI33 1791 aa17.71■□□□□ 0.43
ERCC3-205ENST00000460485 CPDO75976 1380 aa17.69■□□□□ 0.42
ERCC3-205ENST00000460485 NUCB1Q02818 461 aa17.69■□□□□ 0.42
ERCC3-205ENST00000460485 SYT17Q9BSW7 474 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms