RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 GALNT6Q8NCL4 622 aa6.98□□□□□ -1.29
RFC4-211ENST00000460408 PCDHB11Q9Y5F2 797 aa6.98□□□□□ -1.29
RFC4-211ENST00000460408 GNRH1P01148 92 aa6.97□□□□□ -1.29
RFC4-211ENST00000460408 ALYREFQ86V81 257 aaKnown RBP6.97□□□□□ -1.29
RFC4-211ENST00000460408 ESYT1Q9BSJ8 1104 aa6.97□□□□□ -1.29
RFC4-211ENST00000460408 KRBA1A5PL33 1030 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 SHISA8B8ZZ34 492 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 CENPCQ03188 943 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 FLIIQ13045 1269 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 UBAP2LQ14157 1087 aaKnown RBP6.96□□□□□ -1.3
RFC4-211ENST00000460408 MCM6Q14566 821 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 KLRG1Q96E93 195 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 MKL2Q9ULH7 1088 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 PHF24Q9UPV7 400 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 HRH3Q9Y5N1 445 aa6.96□□□□□ -1.3
RFC4-211ENST00000460408 A0A1B0GTH6 734 aa6.95□□□□□ -1.3
RFC4-211ENST00000460408 IL2RAP01589 272 aa6.95□□□□□ -1.3
RFC4-211ENST00000460408 LBRQ14739 615 aaKnown RBP6.95□□□□□ -1.3
RFC4-211ENST00000460408 C1orf229Q6ZS94 237 aaPredicted RBP6.95□□□□□ -1.3
RFC4-211ENST00000460408 CNKSR1Q969H4 720 aa6.95□□□□□ -1.3
RFC4-211ENST00000460408 ESF1Q9H501 851 aaKnown RBP6.95□□□□□ -1.3
RFC4-211ENST00000460408 GDF2Q9UK05 429 aaPredicted RBP6.95□□□□□ -1.3
RFC4-211ENST00000460408 ZNF330Q9Y3S2 320 aaPredicted RBP6.95□□□□□ -1.3
RFC4-211ENST00000460408 K7ELQ4 463 aaPredicted RBP6.94□□□□□ -1.3
RFC4-211ENST00000460408 GPR37L1O60883 481 aa6.94□□□□□ -1.3
RFC4-211ENST00000460408 BAG6P46379 1132 aa6.94□□□□□ -1.3
RFC4-211ENST00000460408 GPAMQ9HCL2 828 aa6.94□□□□□ -1.3
RFC4-211ENST00000460408 RAB6BQ9NRW1 208 aa6.94□□□□□ -1.3
RFC4-211ENST00000460408 SOCS7O14512 581 aa6.93□□□□□ -1.3
RFC4-211ENST00000460408 COL8A1P27658 744 aa6.93□□□□□ -1.3
RFC4-211ENST00000460408 EDARADDQ8WWZ3 215 aa6.93□□□□□ -1.3
RFC4-211ENST00000460408 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
RFC4-211ENST00000460408 ZSCAN10Q96SZ4 725 aaPredicted RBP6.93□□□□□ -1.3
RFC4-211ENST00000460408 FHDC1Q9C0D6 1143 aaPredicted RBP6.93□□□□□ -1.3
RFC4-211ENST00000460408 HOXB4P17483 251 aaPredicted RBP6.92□□□□□ -1.3
RFC4-211ENST00000460408 PHKA2P46019 1235 aa6.92□□□□□ -1.3
RFC4-211ENST00000460408 GOLGA6L1Q8N7Z2 621 aa6.92□□□□□ -1.3
RFC4-211ENST00000460408 BANK1Q8NDB2 785 aa6.92□□□□□ -1.3
RFC4-211ENST00000460408 ZMYND15Q9H091 742 aa6.92□□□□□ -1.3
RFC4-211ENST00000460408 LINC00114Q6XXX2 140 aa6.91□□□□□ -1.3
RFC4-211ENST00000460408 ATXN7L1Q9ULK2 861 aaPredicted RBP6.91□□□□□ -1.3
RFC4-211ENST00000460408 C2CD2LO14523 706 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 MYCP01106 439 aaPredicted RBP6.9□□□□□ -1.3
RFC4-211ENST00000460408 CSB-PGBD3P0DP91 1061 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 C4orf17Q53FE4 359 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 GNASQ5JWF2 1037 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 SLCO4C1Q6ZQN7 724 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 PGBD3Q8N328 593 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 CCDC85AQ96PX6 553 aaPredicted RBP6.9□□□□□ -1.3
RFC4-211ENST00000460408 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
RFC4-211ENST00000460408 RUBCNLQ9H714 662 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 RRAGCQ9HB90 399 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 NDFIP2Q9NV92 336 aa6.9□□□□□ -1.3
RFC4-211ENST00000460408 MSX1P28360 303 aa6.89□□□□□ -1.31
RFC4-211ENST00000460408 GTF2E1P29083 439 aaPredicted RBP6.89□□□□□ -1.31
RFC4-211ENST00000460408 EFHC2Q5JST6 749 aa6.89□□□□□ -1.31
RFC4-211ENST00000460408 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
RFC4-211ENST00000460408 SNRKQ9NRH2 765 aa6.89□□□□□ -1.31
RFC4-211ENST00000460408 CEP126Q9P2H0 1117 aa6.89□□□□□ -1.31
RFC4-211ENST00000460408 NDUFB9Q9Y6M9 179 aa6.89□□□□□ -1.31
RFC4-211ENST00000460408 BMP4P12644 408 aa6.88□□□□□ -1.31
RFC4-211ENST00000460408 ESCO1Q5FWF5 840 aa6.88□□□□□ -1.31
RFC4-211ENST00000460408 MTMR14Q8NCE2 650 aa6.88□□□□□ -1.31
RFC4-211ENST00000460408 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
RFC4-211ENST00000460408 CRISPLD1Q9H336 500 aa6.88□□□□□ -1.31
RFC4-211ENST00000460408 GGA1Q9UJY5 639 aa6.88□□□□□ -1.31
RFC4-211ENST00000460408 A6NJR5 290 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 PIK3R2O00459 728 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 BNIP3LO60238 219 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 FURINP09958 794 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 FGFR3P22607 806 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 CTBSQ01459 385 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 GRIN2CQ14957 1233 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
RFC4-211ENST00000460408 RHBDD1Q8TEB9 315 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 CLUAP1Q96AJ1 413 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 SUV39H2Q9H5I1 410 aa6.87□□□□□ -1.31
RFC4-211ENST00000460408 GNB5O14775 395 aa6.86□□□□□ -1.31
RFC4-211ENST00000460408 EPXP11678 715 aa6.86□□□□□ -1.31
RFC4-211ENST00000460408 UBTFP17480 764 aaKnown RBP6.86□□□□□ -1.31
RFC4-211ENST00000460408 AMPD1P23109 780 aa6.86□□□□□ -1.31
RFC4-211ENST00000460408 Q8N3U1 123 aa6.86□□□□□ -1.31
RFC4-211ENST00000460408 BTBD6Q96KE9 485 aa6.86□□□□□ -1.31
RFC4-211ENST00000460408 ARAFP10398 606 aa6.85□□□□□ -1.31
RFC4-211ENST00000460408 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
RFC4-211ENST00000460408 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
RFC4-211ENST00000460408 DNAAF2Q9NVR5 837 aaKnown RBP6.85□□□□□ -1.31
RFC4-211ENST00000460408 C1QTNF9BB2RNN3 333 aa6.84□□□□□ -1.31
RFC4-211ENST00000460408 APBB1O00213 710 aa6.84□□□□□ -1.31
RFC4-211ENST00000460408 DGKGP49619 791 aa6.84□□□□□ -1.31
RFC4-211ENST00000460408 FIGNL1Q6PIW4 674 aa6.84□□□□□ -1.31
RFC4-211ENST00000460408 PHTF2Q8N3S3 785 aa6.84□□□□□ -1.31
RFC4-211ENST00000460408 COG6Q9Y2V7 657 aa6.84□□□□□ -1.31
RFC4-211ENST00000460408 SUPT5HO00267 1087 aaKnown RBP6.83□□□□□ -1.32
RFC4-211ENST00000460408 USP4Q13107 963 aa6.83□□□□□ -1.32
RFC4-211ENST00000460408 TLR1Q15399 786 aa6.83□□□□□ -1.32
RFC4-211ENST00000460408 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
RFC4-211ENST00000460408 CD163Q86VB7 1156 aa6.83□□□□□ -1.32
RFC4-211ENST00000460408 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
RFC4-211ENST00000460408 FNBP4Q8N3X1 1017 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms