RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 TAF1LQ8IZX4 1826 aa29.87■■■□□ 2.37
PDE6B-203ENST00000460119 MMP10P09238 476 aa29.86■■■□□ 2.37
PDE6B-203ENST00000460119 TRAPPC3LQ5T215 181 aa29.84■■■□□ 2.37
PDE6B-203ENST00000460119 GPBP1L1Q9HC44 474 aaPredicted RBP29.84■■■□□ 2.37
PDE6B-203ENST00000460119 ERVV-2B6SEH9 535 aa29.83■■■□□ 2.37
PDE6B-203ENST00000460119 PLEKHO1Q53GL0 409 aaPredicted RBP29.83■■■□□ 2.37
PDE6B-203ENST00000460119 EIF4G2P78344 907 aaKnown RBP eCLIP29.82■■■□□ 2.36
PDE6B-203ENST00000460119 ZNF530Q6P9A1 599 aaPredicted RBP29.82■■■□□ 2.36
PDE6B-203ENST00000460119 AEBP1Q8IUX7 1158 aa29.82■■■□□ 2.36
PDE6B-203ENST00000460119 RTCBQ9Y3I0 505 aaKnown RBP29.82■■■□□ 2.36
PDE6B-203ENST00000460119 MAP2P11137 1827 aaKnown RBP29.82■■■□□ 2.36
PDE6B-203ENST00000460119 ARHGEF1Q92888 912 aaKnown RBP29.81■■■□□ 2.36
PDE6B-203ENST00000460119 DCAF5Q96JK2 942 aa29.81■■■□□ 2.36
PDE6B-203ENST00000460119 GOLGB1Q14789 3259 aaKnown RBP29.81■■■□□ 2.36
PDE6B-203ENST00000460119 CABP4P57796 275 aa29.8■■■□□ 2.36
PDE6B-203ENST00000460119 MORC1Q86VD1 984 aa29.79■■■□□ 2.36
PDE6B-203ENST00000460119 UBR3Q6ZT12 1888 aa29.78■■■□□ 2.36
PDE6B-203ENST00000460119 A0A0G2JLW4 131 aa29.78■■■□□ 2.36
PDE6B-203ENST00000460119 ANKRD26Q9UPS8 1709 aa29.78■■■□□ 2.36
PDE6B-203ENST00000460119 KDRP35968 1356 aa29.77■■■□□ 2.36
PDE6B-203ENST00000460119 HSP90AB1P08238 724 aaKnown RBP29.77■■■□□ 2.36
PDE6B-203ENST00000460119 ADCY9O60503 1353 aa29.77■■■□□ 2.36
PDE6B-203ENST00000460119 PTCD1O75127 700 aaKnown RBP29.76■■■□□ 2.35
PDE6B-203ENST00000460119 MTHFSP49914 203 aa29.76■■■□□ 2.35
PDE6B-203ENST00000460119 RC3H1Q5TC82 1133 aaKnown RBP29.76■■■□□ 2.35
PDE6B-203ENST00000460119 NLGN1Q8N2Q7 840 aa29.76■■■□□ 2.35
PDE6B-203ENST00000460119 CLSPNQ9HAW4 1339 aa29.75■■■□□ 2.35
PDE6B-203ENST00000460119 KDM6AO15550 1401 aaPredicted RBP29.74■■■□□ 2.35
PDE6B-203ENST00000460119 RPS6KA4O75676 772 aa29.74■■■□□ 2.35
PDE6B-203ENST00000460119 AMOTQ4VCS5 1084 aa29.74■■■□□ 2.35
PDE6B-203ENST00000460119 NFATC2IPQ8NCF5 419 aa29.74■■■□□ 2.35
PDE6B-203ENST00000460119 GYS1P13807 737 aa29.73■■■□□ 2.35
PDE6B-203ENST00000460119 SULT6B1Q6IMI4 303 aa29.73■■■□□ 2.35
PDE6B-203ENST00000460119 RFC4P35249 363 aa29.72■■■□□ 2.35
PDE6B-203ENST00000460119 BCS1LQ9Y276 419 aa29.72■■■□□ 2.35
PDE6B-203ENST00000460119 DPEP1P16444 411 aa29.71■■■□□ 2.35
PDE6B-203ENST00000460119 TGFB2P61812 414 aa29.7■■■□□ 2.35
PDE6B-203ENST00000460119 C1orf141Q5JVX7 400 aa29.7■■■□□ 2.35
PDE6B-203ENST00000460119 CNTNAP4Q9C0A0 1308 aa29.7■■■□□ 2.34
PDE6B-203ENST00000460119 SRP68Q9UHB9 627 aaKnown RBP29.69■■■□□ 2.34
PDE6B-203ENST00000460119 PXDNLA1KZ92 1463 aa29.68■■■□□ 2.34
PDE6B-203ENST00000460119 ADRA2BP18089 450 aa29.68■■■□□ 2.34
PDE6B-203ENST00000460119 IL13P35225 146 aa29.68■■■□□ 2.34
PDE6B-203ENST00000460119 ARHGAP27Q6ZUM4 889 aa29.67■■■□□ 2.34
PDE6B-203ENST00000460119 CCDC87Q9NVE4 849 aa29.67■■■□□ 2.34
PDE6B-203ENST00000460119 PARP3Q9Y6F1 533 aa29.67■■■□□ 2.34
PDE6B-203ENST00000460119 KIF3CO14782 793 aa29.66■■■□□ 2.34
PDE6B-203ENST00000460119 CRKLP46109 303 aaKnown RBP29.66■■■□□ 2.34
PDE6B-203ENST00000460119 KNSTRNQ9Y448 316 aa29.66■■■□□ 2.34
PDE6B-203ENST00000460119 PLEKHG2Q9H7P9 1386 aa29.65■■■□□ 2.34
PDE6B-203ENST00000460119 HSPA6P17066 643 aa29.64■■■□□ 2.34
PDE6B-203ENST00000460119 FCHSD2O94868 740 aa29.63■■■□□ 2.33
PDE6B-203ENST00000460119 FKBP8Q14318 412 aa29.63■■■□□ 2.33
PDE6B-203ENST00000460119 LGR6Q9HBX8 967 aa29.63■■■□□ 2.33
PDE6B-203ENST00000460119 CICQ96RK0 1608 aaPredicted RBP29.63■■■□□ 2.33
PDE6B-203ENST00000460119 KCNA3P22001 575 aa29.62■■■□□ 2.33
PDE6B-203ENST00000460119 CCER1Q8TC90 406 aaPredicted RBP29.62■■■□□ 2.33
PDE6B-203ENST00000460119 INTS5Q6P9B9 1019 aaKnown RBP29.61■■■□□ 2.33
PDE6B-203ENST00000460119 C10orf71Q711Q0 1435 aa29.61■■■□□ 2.33
PDE6B-203ENST00000460119 DDR1Q08345 913 aa29.59■■■□□ 2.33
PDE6B-203ENST00000460119 AMER1Q5JTC6 1135 aaPredicted RBP29.59■■■□□ 2.33
PDE6B-203ENST00000460119 DNAJC10Q8IXB1 793 aa29.59■■■□□ 2.33
PDE6B-203ENST00000460119 HMOX1P09601 288 aa29.58■■■□□ 2.33
PDE6B-203ENST00000460119 SLC39A6Q13433 755 aa29.57■■■□□ 2.32
PDE6B-203ENST00000460119 USP42Q9H9J4 1324 aaKnown RBP29.56■■■□□ 2.32
PDE6B-203ENST00000460119 AKAP4Q5JQC9 854 aa29.56■■■□□ 2.32
PDE6B-203ENST00000460119 CHRNA5P30532 468 aa29.55■■■□□ 2.32
PDE6B-203ENST00000460119 NMRK2Q9NPI5 230 aa29.54■■■□□ 2.32
PDE6B-203ENST00000460119 SLC52A2Q9HAB3 445 aa29.53■■■□□ 2.32
PDE6B-203ENST00000460119 PIM2Q9P1W9 311 aa29.53■■■□□ 2.32
PDE6B-203ENST00000460119 RNMTO43148 476 aaKnown RBP29.52■■■□□ 2.32
PDE6B-203ENST00000460119 C9orf131Q5VYM1 1079 aa29.52■■■□□ 2.32
PDE6B-203ENST00000460119 USPL1Q5W0Q7 1092 aa29.52■■■□□ 2.32
PDE6B-203ENST00000460119 N4BP2Q86UW6 1770 aaPredicted RBP29.52■■■□□ 2.32
PDE6B-203ENST00000460119 TM4SF1P30408 202 aa29.51■■■□□ 2.31
PDE6B-203ENST00000460119 MYH14Q7Z406 1995 aaKnown RBP29.5■■■□□ 2.31
PDE6B-203ENST00000460119 MTHFSDQ2M296 383 aaKnown RBP29.5■■■□□ 2.31
PDE6B-203ENST00000460119 KIAA1551Q9HCM1 1747 aa29.5■■■□□ 2.31
PDE6B-203ENST00000460119 KIF7Q2M1P5 1343 aa29.49■■■□□ 2.31
PDE6B-203ENST00000460119 C4AP0C0L4 1744 aa29.49■■■□□ 2.31
PDE6B-203ENST00000460119 POLRMTO00411 1230 aaKnown RBP29.49■■■□□ 2.31
PDE6B-203ENST00000460119 CYP19A1P11511 503 aaPredicted RBP29.49■■■□□ 2.31
PDE6B-203ENST00000460119 CNGB1Q14028 1251 aaPredicted RBP29.49■■■□□ 2.31
PDE6B-203ENST00000460119 DALRD3Q5D0E6 543 aaKnown RBP29.49■■■□□ 2.31
PDE6B-203ENST00000460119 IFFO2Q5TF58 517 aa29.49■■■□□ 2.31
PDE6B-203ENST00000460119 ZPR1O75312 459 aa29.48■■■□□ 2.31
PDE6B-203ENST00000460119 CC2D1BQ5T0F9 858 aaKnown RBP29.48■■■□□ 2.31
PDE6B-203ENST00000460119 ZNF831Q5JPB2 1677 aa29.47■■■□□ 2.31
PDE6B-203ENST00000460119 COL5A3P25940 1745 aaPredicted RBP29.47■■■□□ 2.31
PDE6B-203ENST00000460119 SOS1Q07889 1333 aaPredicted RBP29.46■■■□□ 2.31
PDE6B-203ENST00000460119 PER1O15534 1290 aaPredicted RBP29.46■■■□□ 2.31
PDE6B-203ENST00000460119 TOMM70O94826 608 aa29.46■■■□□ 2.31
PDE6B-203ENST00000460119 KIF13BQ9NQT8 1826 aa29.45■■■□□ 2.31
PDE6B-203ENST00000460119 ZBTB1Q9Y2K1 713 aa29.44■■■□□ 2.3
PDE6B-203ENST00000460119 NFIXQ14938 502 aa29.43■■■□□ 2.3
PDE6B-203ENST00000460119 BCL2L12Q9HB09 334 aa29.43■■■□□ 2.3
PDE6B-203ENST00000460119 CEP350Q5VT06 3117 aa29.43■■■□□ 2.3
PDE6B-203ENST00000460119 DIAPH1O60610 1272 aaKnown RBP29.42■■■□□ 2.3
PDE6B-203ENST00000460119 RNF181Q9P0P0 153 aa29.42■■■□□ 2.3
PDE6B-203ENST00000460119 CANXP27824 592 aaKnown RBP29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms