RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 C4AP0C0L4 1744 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 RAB3GAP2Q9H2M9 1393 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 HOXC9P31274 260 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 TMF1P82094 1093 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 ITPK1Q13572 414 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 AIDAQ96BJ3 306 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 CGNL1Q0VF96 1302 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 SBF1O95248 1867 aa19.48■□□□□ 0.71
PCOLCE-202ENST00000460002 CNTNAP1P78357 1384 aa19.47■□□□□ 0.71
PCOLCE-202ENST00000460002 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
PCOLCE-202ENST00000460002 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
PCOLCE-202ENST00000460002 PIGBQ92521 554 aa19.47■□□□□ 0.71
PCOLCE-202ENST00000460002 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
PCOLCE-202ENST00000460002 KDM6AO15550 1401 aaPredicted RBP19.46■□□□□ 0.71
PCOLCE-202ENST00000460002 POTECB2RU33 542 aa19.46■□□□□ 0.71
PCOLCE-202ENST00000460002 RASSF7Q02833 373 aa19.46■□□□□ 0.71
PCOLCE-202ENST00000460002 MAP3K19Q56UN5 1328 aa19.46■□□□□ 0.71
PCOLCE-202ENST00000460002 PCDH11XQ9BZA7 1347 aa19.46■□□□□ 0.71
PCOLCE-202ENST00000460002 PCDH11YQ9BZA8 1340 aa19.46■□□□□ 0.71
PCOLCE-202ENST00000460002 CYP27B1O15528 508 aa19.44■□□□□ 0.7
PCOLCE-202ENST00000460002 RAPGEF4Q8WZA2 1011 aa19.44■□□□□ 0.7
PCOLCE-202ENST00000460002 WBP1LQ9NX94 342 aa19.44■□□□□ 0.7
PCOLCE-202ENST00000460002 PARP3Q9Y6F1 533 aa19.44■□□□□ 0.7
PCOLCE-202ENST00000460002 CCDC85CA6NKD9 419 aa19.43■□□□□ 0.7
PCOLCE-202ENST00000460002 GYS1P13807 737 aa19.43■□□□□ 0.7
PCOLCE-202ENST00000460002 FBLN1P23142 703 aa19.43■□□□□ 0.7
PCOLCE-202ENST00000460002 ITGB4P16144 1822 aa19.43■□□□□ 0.7
PCOLCE-202ENST00000460002 HSPA8P11142 646 aaKnown RBP19.42■□□□□ 0.7
PCOLCE-202ENST00000460002 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
PCOLCE-202ENST00000460002 CHRNA5P30532 468 aa19.42■□□□□ 0.7
PCOLCE-202ENST00000460002 TRAPPC3LQ5T215 181 aa19.42■□□□□ 0.7
PCOLCE-202ENST00000460002 EDC4Q6P2E9 1401 aaKnown RBP19.42■□□□□ 0.7
PCOLCE-202ENST00000460002 ATP6V1AP38606 617 aa19.41■□□□□ 0.7
PCOLCE-202ENST00000460002 AMPHP49418 695 aa19.41■□□□□ 0.7
PCOLCE-202ENST00000460002 VEGFBP49765 207 aa19.41■□□□□ 0.7
PCOLCE-202ENST00000460002 ARHGEF1Q92888 912 aaKnown RBP19.4■□□□□ 0.7
PCOLCE-202ENST00000460002 LMNB1P20700 586 aa19.39■□□□□ 0.69
PCOLCE-202ENST00000460002 ASAP1Q9ULH1 1129 aa19.39■□□□□ 0.69
PCOLCE-202ENST00000460002 RTCBQ9Y3I0 505 aaKnown RBP19.39■□□□□ 0.69
PCOLCE-202ENST00000460002 CHADLQ6NUI6 762 aa19.38■□□□□ 0.69
PCOLCE-202ENST00000460002 POTEIP0CG38 1075 aa19.37■□□□□ 0.69
PCOLCE-202ENST00000460002 POTEJP0CG39 1038 aa19.37■□□□□ 0.69
PCOLCE-202ENST00000460002 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
PCOLCE-202ENST00000460002 TMC1Q8TDI8 760 aa19.35■□□□□ 0.69
PCOLCE-202ENST00000460002 SLC12A5Q9H2X9 1139 aa19.35■□□□□ 0.69
PCOLCE-202ENST00000460002 TIAM2Q8IVF5 1701 aa19.34■□□□□ 0.69
PCOLCE-202ENST00000460002 ADRA2BP18089 450 aa19.34■□□□□ 0.69
PCOLCE-202ENST00000460002 RFC4P35249 363 aa19.34■□□□□ 0.69
PCOLCE-202ENST00000460002 DDR1Q08345 913 aa19.34■□□□□ 0.69
PCOLCE-202ENST00000460002 A0A1W2PP64 1363 aa19.33■□□□□ 0.69
PCOLCE-202ENST00000460002 PASKQ96RG2 1323 aa19.33■□□□□ 0.69
PCOLCE-202ENST00000460002 NKX1-1Q15270 411 aaPredicted RBP19.33■□□□□ 0.68
PCOLCE-202ENST00000460002 RTL1A6NKG5 1358 aa19.32■□□□□ 0.68
PCOLCE-202ENST00000460002 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
PCOLCE-202ENST00000460002 TMOD3Q9NYL9 352 aa19.32■□□□□ 0.68
PCOLCE-202ENST00000460002 KDRP35968 1356 aa19.32■□□□□ 0.68
PCOLCE-202ENST00000460002 SLC4A9Q96Q91 983 aa19.31■□□□□ 0.68
PCOLCE-202ENST00000460002 ATG3Q9NT62 314 aa19.31■□□□□ 0.68
PCOLCE-202ENST00000460002 RRS1Q15050 365 aaKnown RBP19.3■□□□□ 0.68
PCOLCE-202ENST00000460002 DPY19L2Q6NUT2 758 aa19.3■□□□□ 0.68
PCOLCE-202ENST00000460002 COG3Q96JB2 828 aa19.3■□□□□ 0.68
PCOLCE-202ENST00000460002 SMG6Q86US8 1419 aaKnown RBP19.29■□□□□ 0.68
PCOLCE-202ENST00000460002 NFKBIEO00221 500 aa19.29■□□□□ 0.68
PCOLCE-202ENST00000460002 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
PCOLCE-202ENST00000460002 FKBP8Q14318 412 aa19.29■□□□□ 0.68
PCOLCE-202ENST00000460002 RC3H1Q5TC82 1133 aaKnown RBP19.29■□□□□ 0.68
PCOLCE-202ENST00000460002 TMEM88BA6NKF7 163 aa19.28■□□□□ 0.68
PCOLCE-202ENST00000460002 TERF2IPQ9NYB0 399 aa19.28■□□□□ 0.68
PCOLCE-202ENST00000460002 SRP68Q9UHB9 627 aaKnown RBP19.28■□□□□ 0.68
PCOLCE-202ENST00000460002 TNRC18O15417 2968 aaPredicted RBP19.27■□□□□ 0.68
PCOLCE-202ENST00000460002 CNTNAP4Q9C0A0 1308 aa19.26■□□□□ 0.67
PCOLCE-202ENST00000460002 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
PCOLCE-202ENST00000460002 POLRMTO00411 1230 aaKnown RBP19.25■□□□□ 0.67
PCOLCE-202ENST00000460002 MAP2K1Q02750 393 aaPredicted RBP19.25■□□□□ 0.67
PCOLCE-202ENST00000460002 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
PCOLCE-202ENST00000460002 HSP90AB2PQ58FF8 381 aa19.24■□□□□ 0.67
PCOLCE-202ENST00000460002 ITGBL1O95965 494 aaPredicted RBP19.23■□□□□ 0.67
PCOLCE-202ENST00000460002 USP42Q9H9J4 1324 aaKnown RBP19.23■□□□□ 0.67
PCOLCE-202ENST00000460002 COL5A3P25940 1745 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 CCDC88AQ3V6T2 1871 aa19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 ROCK2O75116 1388 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 INSRP06213 1382 aa19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 DDNO94850 711 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 LDHDQ86WU2 507 aa19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 RBM42Q9BTD8 480 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 WDR33Q9C0J8 1336 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-202ENST00000460002 TM4SF1P30408 202 aa19.21■□□□□ 0.67
PCOLCE-202ENST00000460002 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
PCOLCE-202ENST00000460002 ERFEQ4G0M1 354 aa19.21■□□□□ 0.67
PCOLCE-202ENST00000460002 ZNF831Q5JPB2 1677 aa19.2■□□□□ 0.66
PCOLCE-202ENST00000460002 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
PCOLCE-202ENST00000460002 SPG7Q9UQ90 795 aa19.2■□□□□ 0.66
PCOLCE-202ENST00000460002 PDE4DIPQ5VU43 2346 aa19.2■□□□□ 0.66
PCOLCE-202ENST00000460002 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
PCOLCE-202ENST00000460002 MCOLN1Q9GZU1 580 aa19.18■□□□□ 0.66
PCOLCE-202ENST00000460002 PHKG2P15735 406 aa19.17■□□□□ 0.66
PCOLCE-202ENST00000460002 L3MBTL2Q969R5 705 aa19.17■□□□□ 0.66
PCOLCE-202ENST00000460002 NCAPD2Q15021 1401 aa19.17■□□□□ 0.66
PCOLCE-202ENST00000460002 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
PCOLCE-202ENST00000460002 TAF1DQ9H5J8 278 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms