RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 MSL1Q68DK7 614 aa21.02■□□□□ 0.96
SDF4-204ENST00000459994 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
SDF4-204ENST00000459994 MSH5O43196 834 aa21.01■□□□□ 0.95
SDF4-204ENST00000459994 SIK1P57059 783 aa21.01■□□□□ 0.95
SDF4-204ENST00000459994 SLC4A9Q96Q91 983 aa21.01■□□□□ 0.95
SDF4-204ENST00000459994 TJP1Q07157 1748 aa21.01■□□□□ 0.95
SDF4-204ENST00000459994 CHD4Q14839 1912 aa21■□□□□ 0.95
SDF4-204ENST00000459994 HMOX1P09601 288 aa21■□□□□ 0.95
SDF4-204ENST00000459994 MAP3K5Q99683 1374 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 UTRNP46939 3433 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 ANP32CO43423 234 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 RALBP1Q15311 655 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 DCAF5Q96JK2 942 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 ADAMTS7Q9UKP4 1686 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 C4AP0C0L4 1744 aa20.98■□□□□ 0.95
SDF4-204ENST00000459994 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
SDF4-204ENST00000459994 PHF14O94880 888 aa20.97■□□□□ 0.95
SDF4-204ENST00000459994 AMOTQ4VCS5 1084 aa20.97■□□□□ 0.95
SDF4-204ENST00000459994 PRKRIP1Q9H875 184 aaPredicted RBP20.97■□□□□ 0.95
SDF4-204ENST00000459994 ATP6V1AP38606 617 aa20.96■□□□□ 0.95
SDF4-204ENST00000459994 NLGN2Q8NFZ4 835 aa20.96■□□□□ 0.95
SDF4-204ENST00000459994 AK7Q96M32 723 aa20.96■□□□□ 0.95
SDF4-204ENST00000459994 POLD1P28340 1107 aa20.95■□□□□ 0.94
SDF4-204ENST00000459994 CICQ96RK0 1608 aaPredicted RBP20.94■□□□□ 0.94
SDF4-204ENST00000459994 HSP90AB1P08238 724 aaKnown RBP20.94■□□□□ 0.94
SDF4-204ENST00000459994 C1orf141Q5JVX7 400 aa20.94■□□□□ 0.94
SDF4-204ENST00000459994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.93■□□□□ 0.94
SDF4-204ENST00000459994 DIAPH1O60610 1272 aaKnown RBP20.93■□□□□ 0.94
SDF4-204ENST00000459994 YY1P25490 414 aa20.93■□□□□ 0.94
SDF4-204ENST00000459994 CABP4P57796 275 aa20.93■□□□□ 0.94
SDF4-204ENST00000459994 RBM42Q9BTD8 480 aaKnown RBP20.93■□□□□ 0.94
SDF4-204ENST00000459994 LGR6Q9HBX8 967 aa20.93■□□□□ 0.94
SDF4-204ENST00000459994 NFATC2IPQ8NCF5 419 aa20.92■□□□□ 0.94
SDF4-204ENST00000459994 MRC1P22897 1456 aa20.92■□□□□ 0.94
SDF4-204ENST00000459994 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
SDF4-204ENST00000459994 GNPATO15228 680 aa20.91■□□□□ 0.94
SDF4-204ENST00000459994 MTHFSDQ2M296 383 aaKnown RBP20.91■□□□□ 0.94
SDF4-204ENST00000459994 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
SDF4-204ENST00000459994 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
SDF4-204ENST00000459994 AKAP4Q5JQC9 854 aa20.89■□□□□ 0.93
SDF4-204ENST00000459994 FLAD1Q8NFF5 587 aa20.89■□□□□ 0.93
SDF4-204ENST00000459994 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
SDF4-204ENST00000459994 KIAA1551Q9HCM1 1747 aa20.88■□□□□ 0.93
SDF4-204ENST00000459994 PTCD1O75127 700 aaKnown RBP20.88■□□□□ 0.93
SDF4-204ENST00000459994 SSFA2P28290 1259 aa20.88■□□□□ 0.93
SDF4-204ENST00000459994 MYBBP1AQ9BQG0 1328 aaKnown RBP20.87■□□□□ 0.93
SDF4-204ENST00000459994 RNMTO43148 476 aaKnown RBP20.87■□□□□ 0.93
SDF4-204ENST00000459994 PPP2R1AP30153 589 aa20.87■□□□□ 0.93
SDF4-204ENST00000459994 KCPQ6ZWJ8 1503 aa20.87■□□□□ 0.93
SDF4-204ENST00000459994 KIF13BQ9NQT8 1826 aa20.87■□□□□ 0.93
SDF4-204ENST00000459994 U2SURPO15042 1029 aaKnown RBP20.86■□□□□ 0.93
SDF4-204ENST00000459994 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
SDF4-204ENST00000459994 SLC39A6Q13433 755 aa20.85■□□□□ 0.93
SDF4-204ENST00000459994 SLC52A2Q9HAB3 445 aa20.85■□□□□ 0.93
SDF4-204ENST00000459994 PELP1Q8IZL8 1130 aaKnown RBP20.84■□□□□ 0.93
SDF4-204ENST00000459994 MIER1Q8N108 512 aa20.84■□□□□ 0.93
SDF4-204ENST00000459994 CNTNAP4Q9C0A0 1308 aa20.83■□□□□ 0.93
SDF4-204ENST00000459994 YBX3P16989 372 aaKnown RBP eCLIP20.83■□□□□ 0.93
SDF4-204ENST00000459994 GPR162Q16538 588 aa20.83■□□□□ 0.93
SDF4-204ENST00000459994 DLG5Q8TDM6 1919 aa20.82■□□□□ 0.92
SDF4-204ENST00000459994 HMGB2P26583 209 aaKnown RBP20.81■□□□□ 0.92
SDF4-204ENST00000459994 RC3H1Q5TC82 1133 aaKnown RBP20.81■□□□□ 0.92
SDF4-204ENST00000459994 ARHGEF1Q92888 912 aaKnown RBP20.81■□□□□ 0.92
SDF4-204ENST00000459994 RTCBQ9Y3I0 505 aaKnown RBP20.81■□□□□ 0.92
SDF4-204ENST00000459994 CCER2I3L3R5 266 aa20.8■□□□□ 0.92
SDF4-204ENST00000459994 RPS6KA4O75676 772 aa20.8■□□□□ 0.92
SDF4-204ENST00000459994 CRKLP46109 303 aaKnown RBP20.8■□□□□ 0.92
SDF4-204ENST00000459994 PHACTR3Q96KR7 559 aa20.8■□□□□ 0.92
SDF4-204ENST00000459994 TRAPPC3LQ5T215 181 aa20.79■□□□□ 0.92
SDF4-204ENST00000459994 DNAJC10Q8IXB1 793 aa20.79■□□□□ 0.92
SDF4-204ENST00000459994 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
SDF4-204ENST00000459994 WWC3Q9ULE0 1092 aa20.79■□□□□ 0.92
SDF4-204ENST00000459994 BRCA1P38398 1863 aaKnown RBP20.78■□□□□ 0.92
SDF4-204ENST00000459994 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
SDF4-204ENST00000459994 MMP10P09238 476 aa20.77■□□□□ 0.92
SDF4-204ENST00000459994 GYS1P13807 737 aa20.77■□□□□ 0.92
SDF4-204ENST00000459994 PRKAR2BP31323 418 aa20.77■□□□□ 0.92
SDF4-204ENST00000459994 INTS5Q6P9B9 1019 aaKnown RBP20.77■□□□□ 0.92
SDF4-204ENST00000459994 SRP68Q9UHB9 627 aaKnown RBP20.77■□□□□ 0.92
SDF4-204ENST00000459994 CD2APQ9Y5K6 639 aa20.77■□□□□ 0.92
SDF4-204ENST00000459994 AFDNP55196 1824 aaKnown RBP20.76■□□□□ 0.91
SDF4-204ENST00000459994 ZNF784Q8NCA9 323 aaPredicted RBP20.74■□□□□ 0.91
SDF4-204ENST00000459994 CFAP53Q96M91 514 aa20.74■□□□□ 0.91
SDF4-204ENST00000459994 GNAT3A8MTJ3 354 aa20.73■□□□□ 0.91
SDF4-204ENST00000459994 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
SDF4-204ENST00000459994 ADRA2BP18089 450 aa20.73■□□□□ 0.91
SDF4-204ENST00000459994 RFC4P35249 363 aa20.73■□□□□ 0.91
SDF4-204ENST00000459994 GAS2L2Q8NHY3 880 aa20.72■□□□□ 0.91
SDF4-204ENST00000459994 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
SDF4-204ENST00000459994 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
SDF4-204ENST00000459994 U2AF1L5P0DN76 240 aaPredicted RBP20.71■□□□□ 0.91
SDF4-204ENST00000459994 U2AF1Q01081 240 aaKnown RBP eCLIP20.71■□□□□ 0.91
SDF4-204ENST00000459994 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
SDF4-204ENST00000459994 USP42Q9H9J4 1324 aaKnown RBP20.71■□□□□ 0.91
SDF4-204ENST00000459994 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
SDF4-204ENST00000459994 KCNQ3O43525 872 aa20.7■□□□□ 0.9
SDF4-204ENST00000459994 FKBP8Q14318 412 aa20.7■□□□□ 0.9
SDF4-204ENST00000459994 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
SDF4-204ENST00000459994 MRS2Q9HD23 443 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms