RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
HPS4-207ENST00000459918 LOC102724428A0A0B4J2F2 783 aa11□□□□□ -0.65
HPS4-207ENST00000459918 FYB1O15117 783 aa11□□□□□ -0.65
HPS4-207ENST00000459918 CYP27B1O15528 508 aa11□□□□□ -0.65
HPS4-207ENST00000459918 MMP10P09238 476 aa11□□□□□ -0.65
HPS4-207ENST00000459918 ATP6V1AP38606 617 aa11□□□□□ -0.65
HPS4-207ENST00000459918 SIK1P57059 783 aa11□□□□□ -0.65
HPS4-207ENST00000459918 WDR90Q96KV7 1748 aa11□□□□□ -0.65
HPS4-207ENST00000459918 KIF3CO14782 793 aa10.99□□□□□ -0.65
HPS4-207ENST00000459918 ARHGAP27Q6ZUM4 889 aa10.99□□□□□ -0.65
HPS4-207ENST00000459918 AMIGO3Q86WK7 504 aa10.99□□□□□ -0.65
HPS4-207ENST00000459918 LINC00116Q8NCU8 138 aa10.99□□□□□ -0.65
HPS4-207ENST00000459918 PIGBQ92521 554 aa10.99□□□□□ -0.65
HPS4-207ENST00000459918 MAP2P11137 1827 aaKnown RBP10.99□□□□□ -0.65
HPS4-207ENST00000459918 KIF13BQ9NQT8 1826 aa10.99□□□□□ -0.65
HPS4-207ENST00000459918 TOMM70O94826 608 aa10.98□□□□□ -0.65
HPS4-207ENST00000459918 TESK2Q96S53 571 aa10.98□□□□□ -0.65
HPS4-207ENST00000459918 KIF24Q5T7B8 1368 aa10.98□□□□□ -0.65
HPS4-207ENST00000459918 PXDNLA1KZ92 1463 aa10.98□□□□□ -0.65
HPS4-207ENST00000459918 RTCBQ9Y3I0 505 aaKnown RBP10.97□□□□□ -0.65
HPS4-207ENST00000459918 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
HPS4-207ENST00000459918 KIAA1551Q9HCM1 1747 aa10.97□□□□□ -0.65
HPS4-207ENST00000459918 ANKRD26Q9UPS8 1709 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 A0A0G2JLW4 131 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 FCHSD2O94868 740 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 CDCA8Q53HL2 280 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 TRAPPC3LQ5T215 181 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
HPS4-207ENST00000459918 CCDC87Q9NVE4 849 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 ASAP1Q9ULH1 1129 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
HPS4-207ENST00000459918 RFC4P35249 363 aa10.95□□□□□ -0.66
HPS4-207ENST00000459918 ITPK1Q13572 414 aa10.95□□□□□ -0.66
HPS4-207ENST00000459918 IFNL2Q8IZJ0 200 aa10.95□□□□□ -0.66
HPS4-207ENST00000459918 NMRK2Q9NPI5 230 aa10.95□□□□□ -0.66
HPS4-207ENST00000459918 PARP3Q9Y6F1 533 aa10.95□□□□□ -0.66
HPS4-207ENST00000459918 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
HPS4-207ENST00000459918 ARFGEF1Q9Y6D6 1849 aa10.95□□□□□ -0.66
HPS4-207ENST00000459918 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
HPS4-207ENST00000459918 TGFB2P61812 414 aa10.94□□□□□ -0.66
HPS4-207ENST00000459918 NLGN1Q8N2Q7 840 aa10.94□□□□□ -0.66
HPS4-207ENST00000459918 TNRC6CQ9HCJ0 1690 aaKnown RBP10.94□□□□□ -0.66
HPS4-207ENST00000459918 C10orf71Q711Q0 1435 aa10.93□□□□□ -0.66
HPS4-207ENST00000459918 PLEKHG2Q9H7P9 1386 aa10.93□□□□□ -0.66
HPS4-207ENST00000459918 KDM2BQ8NHM5 1336 aa10.93□□□□□ -0.66
HPS4-207ENST00000459918 DPEP1P16444 411 aa10.93□□□□□ -0.66
HPS4-207ENST00000459918 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
HPS4-207ENST00000459918 POTEHQ6S545 545 aa10.93□□□□□ -0.66
HPS4-207ENST00000459918 POLR3GLQ9BT43 218 aa10.93□□□□□ -0.66
HPS4-207ENST00000459918 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
HPS4-207ENST00000459918 PHKG2P15735 406 aa10.92□□□□□ -0.66
HPS4-207ENST00000459918 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
HPS4-207ENST00000459918 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
HPS4-207ENST00000459918 ZNF831Q5JPB2 1677 aa10.92□□□□□ -0.66
HPS4-207ENST00000459918 KCPQ6ZWJ8 1503 aa10.91□□□□□ -0.66
HPS4-207ENST00000459918 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
HPS4-207ENST00000459918 HTRA3P83110 453 aa10.91□□□□□ -0.66
HPS4-207ENST00000459918 RBM46Q8TBY0 533 aaKnown RBP10.91□□□□□ -0.66
HPS4-207ENST00000459918 EYA1Q99502 592 aa10.91□□□□□ -0.66
HPS4-207ENST00000459918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
HPS4-207ENST00000459918 RNF181Q9P0P0 153 aa10.91□□□□□ -0.66
HPS4-207ENST00000459918 ARHGEF1Q92888 912 aaKnown RBP10.9□□□□□ -0.66
HPS4-207ENST00000459918 PIM2Q9P1W9 311 aa10.9□□□□□ -0.66
HPS4-207ENST00000459918 NCAPD2Q15021 1401 aa10.9□□□□□ -0.66
HPS4-207ENST00000459918 KDRP35968 1356 aa10.9□□□□□ -0.67
HPS4-207ENST00000459918 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
HPS4-207ENST00000459918 HSP90AB1P08238 724 aaKnown RBP10.89□□□□□ -0.67
HPS4-207ENST00000459918 GYS1P13807 737 aa10.89□□□□□ -0.67
HPS4-207ENST00000459918 CABP4P57796 275 aa10.89□□□□□ -0.67
HPS4-207ENST00000459918 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
HPS4-207ENST00000459918 DNAJC5GQ8N7S2 189 aa10.89□□□□□ -0.67
HPS4-207ENST00000459918 KLRG1Q96E93 195 aa10.89□□□□□ -0.67
HPS4-207ENST00000459918 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
HPS4-207ENST00000459918 PTCD1O75127 700 aaKnown RBP10.88□□□□□ -0.67
HPS4-207ENST00000459918 FSTL1Q12841 308 aa10.88□□□□□ -0.67
HPS4-207ENST00000459918 C1orf141Q5JVX7 400 aa10.88□□□□□ -0.67
HPS4-207ENST00000459918 TIAM2Q8IVF5 1701 aa10.88□□□□□ -0.67
HPS4-207ENST00000459918 TNS4Q8IZW8 715 aa10.88□□□□□ -0.67
HPS4-207ENST00000459918 SBF1O95248 1867 aa10.87□□□□□ -0.67
HPS4-207ENST00000459918 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
HPS4-207ENST00000459918 RPS6KA4O75676 772 aa10.87□□□□□ -0.67
HPS4-207ENST00000459918 PLEKHO1Q53GL0 409 aaPredicted RBP10.87□□□□□ -0.67
HPS4-207ENST00000459918 COL13A1Q5TAT6 717 aaPredicted RBP10.87□□□□□ -0.67
HPS4-207ENST00000459918 ZNF530Q6P9A1 599 aaPredicted RBP10.87□□□□□ -0.67
HPS4-207ENST00000459918 DCAF5Q96JK2 942 aa10.87□□□□□ -0.67
HPS4-207ENST00000459918 CARD14Q9BXL6 1004 aa10.87□□□□□ -0.67
HPS4-207ENST00000459918 RRAGCQ9HB90 399 aa10.87□□□□□ -0.67
HPS4-207ENST00000459918 TJP1Q07157 1748 aa10.87□□□□□ -0.67
HPS4-207ENST00000459918 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
HPS4-207ENST00000459918 CHRNA5P30532 468 aa10.86□□□□□ -0.67
HPS4-207ENST00000459918 EIF4A2Q14240 407 aaKnown RBP10.86□□□□□ -0.67
HPS4-207ENST00000459918 RC3H1Q5TC82 1133 aaKnown RBP10.86□□□□□ -0.67
HPS4-207ENST00000459918 SMC1BQ8NDV3 1235 aa10.86□□□□□ -0.67
HPS4-207ENST00000459918 PCNTO95613 3336 aa10.86□□□□□ -0.67
HPS4-207ENST00000459918 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
HPS4-207ENST00000459918 ZPR1O75312 459 aa10.85□□□□□ -0.67
HPS4-207ENST00000459918 MTHFSP49914 203 aa10.85□□□□□ -0.67
HPS4-207ENST00000459918 POLKQ9UBT6 870 aa10.85□□□□□ -0.67
HPS4-207ENST00000459918 SRP68Q9UHB9 627 aaKnown RBP10.85□□□□□ -0.67
HPS4-207ENST00000459918 USP42Q9H9J4 1324 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms