RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
LMNA-209ENST00000459904 COL5A3P25940 1745 aaPredicted RBP20.86■□□□□ 0.93
LMNA-209ENST00000459904 IFNL2Q8IZJ0 200 aa20.85■□□□□ 0.93
LMNA-209ENST00000459904 VIRMAQ69YN4 1812 aaKnown RBP20.85■□□□□ 0.93
LMNA-209ENST00000459904 KIF13BQ9NQT8 1826 aa20.85■□□□□ 0.93
LMNA-209ENST00000459904 RBM42Q9BTD8 480 aaKnown RBP20.84■□□□□ 0.93
LMNA-209ENST00000459904 C4AP0C0L4 1744 aa20.84■□□□□ 0.93
LMNA-209ENST00000459904 SSFA2P28290 1259 aa20.83■□□□□ 0.93
LMNA-209ENST00000459904 CICQ96RK0 1608 aaPredicted RBP20.82■□□□□ 0.92
LMNA-209ENST00000459904 MMP10P09238 476 aa20.81■□□□□ 0.92
LMNA-209ENST00000459904 GPBP1L1Q9HC44 474 aaPredicted RBP20.81■□□□□ 0.92
LMNA-209ENST00000459904 ADCY9O60503 1353 aa20.81■□□□□ 0.92
LMNA-209ENST00000459904 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
LMNA-209ENST00000459904 AEBP1Q8IUX7 1158 aa20.8■□□□□ 0.92
LMNA-209ENST00000459904 PANK3Q9H999 370 aa20.8■□□□□ 0.92
LMNA-209ENST00000459904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
LMNA-209ENST00000459904 BRCA1P38398 1863 aaKnown RBP20.79■□□□□ 0.92
LMNA-209ENST00000459904 KDRP35968 1356 aa20.79■□□□□ 0.92
LMNA-209ENST00000459904 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
LMNA-209ENST00000459904 PXDNLA1KZ92 1463 aa20.77■□□□□ 0.92
LMNA-209ENST00000459904 A0A0G2JLW4 131 aa20.77■□□□□ 0.92
LMNA-209ENST00000459904 ZNF530Q6P9A1 599 aaPredicted RBP20.77■□□□□ 0.92
LMNA-209ENST00000459904 TJP1Q07157 1748 aa20.76■□□□□ 0.91
LMNA-209ENST00000459904 ARHGEF1Q92888 912 aaKnown RBP20.76■□□□□ 0.91
LMNA-209ENST00000459904 SCN11AQ9UI33 1791 aa20.76■□□□□ 0.91
LMNA-209ENST00000459904 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
LMNA-209ENST00000459904 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
LMNA-209ENST00000459904 RTCBQ9Y3I0 505 aaKnown RBP20.75■□□□□ 0.91
LMNA-209ENST00000459904 PTCD1O75127 700 aaKnown RBP20.74■□□□□ 0.91
LMNA-209ENST00000459904 CABP4P57796 275 aa20.73■□□□□ 0.91
LMNA-209ENST00000459904 SRP68Q9UHB9 627 aaKnown RBP20.73■□□□□ 0.91
LMNA-209ENST00000459904 BCS1LQ9Y276 419 aa20.73■□□□□ 0.91
LMNA-209ENST00000459904 ERVV-2B6SEH9 535 aa20.72■□□□□ 0.91
LMNA-209ENST00000459904 GYS1P13807 737 aa20.72■□□□□ 0.91
LMNA-209ENST00000459904 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
LMNA-209ENST00000459904 DPEP1P16444 411 aa20.71■□□□□ 0.91
LMNA-209ENST00000459904 HMGB2P26583 209 aaKnown RBP20.71■□□□□ 0.91
LMNA-209ENST00000459904 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
LMNA-209ENST00000459904 ARFGEF1Q9Y6D6 1849 aa20.7■□□□□ 0.9
LMNA-209ENST00000459904 KIF3CO14782 793 aa20.7■□□□□ 0.9
LMNA-209ENST00000459904 MORC1Q86VD1 984 aa20.7■□□□□ 0.9
LMNA-209ENST00000459904 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
LMNA-209ENST00000459904 RPS6KA4O75676 772 aa20.69■□□□□ 0.9
LMNA-209ENST00000459904 RFC4P35249 363 aa20.69■□□□□ 0.9
LMNA-209ENST00000459904 MTHFSP49914 203 aa20.69■□□□□ 0.9
LMNA-209ENST00000459904 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.9
LMNA-209ENST00000459904 SULT6B1Q6IMI4 303 aa20.69■□□□□ 0.9
LMNA-209ENST00000459904 NFATC2IPQ8NCF5 419 aa20.69■□□□□ 0.9
LMNA-209ENST00000459904 ADAMTS7Q9UKP4 1686 aa20.68■□□□□ 0.9
LMNA-209ENST00000459904 HSPA6P17066 643 aa20.68■□□□□ 0.9
LMNA-209ENST00000459904 ARHGAP27Q6ZUM4 889 aa20.68■□□□□ 0.9
LMNA-209ENST00000459904 AFDNP55196 1824 aaKnown RBP20.68■□□□□ 0.9
LMNA-209ENST00000459904 CNTNAP4Q9C0A0 1308 aa20.68■□□□□ 0.9
LMNA-209ENST00000459904 SBF1O95248 1867 aa20.68■□□□□ 0.9
LMNA-209ENST00000459904 CRKLP46109 303 aaKnown RBP20.67■□□□□ 0.9
LMNA-209ENST00000459904 RC3H1Q5TC82 1133 aaKnown RBP20.67■□□□□ 0.9
LMNA-209ENST00000459904 NLGN1Q8N2Q7 840 aa20.67■□□□□ 0.9
LMNA-209ENST00000459904 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
LMNA-209ENST00000459904 CCDC88AQ3V6T2 1871 aa20.67■□□□□ 0.9
LMNA-209ENST00000459904 FCHSD2O94868 740 aa20.66■□□□□ 0.9
LMNA-209ENST00000459904 HSP90AB1P08238 724 aaKnown RBP20.66■□□□□ 0.9
LMNA-209ENST00000459904 FKBP8Q14318 412 aa20.66■□□□□ 0.9
LMNA-209ENST00000459904 C1orf141Q5JVX7 400 aa20.66■□□□□ 0.9
LMNA-209ENST00000459904 PARP3Q9Y6F1 533 aa20.66■□□□□ 0.9
LMNA-209ENST00000459904 KCNA3P22001 575 aa20.65■□□□□ 0.9
LMNA-209ENST00000459904 LGR6Q9HBX8 967 aa20.65■□□□□ 0.9
LMNA-209ENST00000459904 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
LMNA-209ENST00000459904 TGFB2P61812 414 aa20.64■□□□□ 0.89
LMNA-209ENST00000459904 DDR1Q08345 913 aa20.64■□□□□ 0.89
LMNA-209ENST00000459904 NMRK2Q9NPI5 230 aa20.64■□□□□ 0.89
LMNA-209ENST00000459904 IL13P35225 146 aa20.63■□□□□ 0.89
LMNA-209ENST00000459904 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
LMNA-209ENST00000459904 AMOTQ4VCS5 1084 aa20.63■□□□□ 0.89
LMNA-209ENST00000459904 HMOX1P09601 288 aa20.62■□□□□ 0.89
LMNA-209ENST00000459904 CHRNA5P30532 468 aa20.62■□□□□ 0.89
LMNA-209ENST00000459904 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
LMNA-209ENST00000459904 DNAJC10Q8IXB1 793 aa20.62■□□□□ 0.89
LMNA-209ENST00000459904 ADRA2BP18089 450 aa20.61■□□□□ 0.89
LMNA-209ENST00000459904 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
LMNA-209ENST00000459904 IFFO2Q5TF58 517 aa20.6■□□□□ 0.89
LMNA-209ENST00000459904 USP42Q9H9J4 1324 aaKnown RBP20.59■□□□□ 0.89
LMNA-209ENST00000459904 C9orf131Q5VYM1 1079 aa20.59■□□□□ 0.89
LMNA-209ENST00000459904 USPL1Q5W0Q7 1092 aa20.58■□□□□ 0.89
LMNA-209ENST00000459904 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.89
LMNA-209ENST00000459904 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.88
LMNA-209ENST00000459904 CLSPNQ9HAW4 1339 aa20.57■□□□□ 0.88
LMNA-209ENST00000459904 HTRA3P83110 453 aa20.57■□□□□ 0.88
LMNA-209ENST00000459904 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
LMNA-209ENST00000459904 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
LMNA-209ENST00000459904 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
LMNA-209ENST00000459904 WDR90Q96KV7 1748 aa20.56■□□□□ 0.88
LMNA-209ENST00000459904 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
LMNA-209ENST00000459904 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
LMNA-209ENST00000459904 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
LMNA-209ENST00000459904 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
LMNA-209ENST00000459904 PIM2Q9P1W9 311 aa20.55■□□□□ 0.88
LMNA-209ENST00000459904 CACNA1SQ13698 1873 aa20.55■□□□□ 0.88
LMNA-209ENST00000459904 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
LMNA-209ENST00000459904 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
LMNA-209ENST00000459904 CYP19A1P11511 503 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms