RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 DCAF5Q96JK2 942 aa31.27■■■□□ 2.6
U2AF1-204ENST00000459639 CCDC136Q96JN2 1154 aa31.27■■■□□ 2.6
U2AF1-204ENST00000459639 DISP2A7MBM2 1401 aa31.27■■■□□ 2.6
U2AF1-204ENST00000459639 SLIT2O94813 1529 aa31.27■■■□□ 2.6
U2AF1-204ENST00000459639 PANK1Q8TE04 598 aa31.26■■■□□ 2.6
U2AF1-204ENST00000459639 CACNA1FO60840 1977 aa31.25■■■□□ 2.59
U2AF1-204ENST00000459639 BTBD11A6QL63 1104 aa31.25■■■□□ 2.59
U2AF1-204ENST00000459639 TRIM27P14373 513 aa31.24■■■□□ 2.59
U2AF1-204ENST00000459639 DZIP1LQ8IYY4 767 aaKnown RBP31.24■■■□□ 2.59
U2AF1-204ENST00000459639 ARHGAP45Q92619 1136 aa31.24■■■□□ 2.59
U2AF1-204ENST00000459639 TNNQ9UQP3 1299 aa31.23■■■□□ 2.59
U2AF1-204ENST00000459639 SPATA31A6Q5VVP1 1343 aa31.23■■■□□ 2.59
U2AF1-204ENST00000459639 RLBP1P12271 317 aa31.22■■■□□ 2.59
U2AF1-204ENST00000459639 FTSJ3Q8IY81 847 aaKnown RBP31.22■■■□□ 2.59
U2AF1-204ENST00000459639 SLC52A2Q9HAB3 445 aa31.22■■■□□ 2.59
U2AF1-204ENST00000459639 USP35Q9P2H5 1018 aa31.22■■■□□ 2.59
U2AF1-204ENST00000459639 EIF4A1P60842 406 aaKnown RBP31.21■■■□□ 2.59
U2AF1-204ENST00000459639 COG6Q9Y2V7 657 aa31.21■■■□□ 2.59
U2AF1-204ENST00000459639 CLUAP1Q96AJ1 413 aa31.19■■■□□ 2.58
U2AF1-204ENST00000459639 TCERG1O14776 1098 aaKnown RBP31.19■■■□□ 2.58
U2AF1-204ENST00000459639 HOXB7P09629 217 aa31.19■■■□□ 2.58
U2AF1-204ENST00000459639 NKX1-1Q15270 411 aaPredicted RBP31.19■■■□□ 2.58
U2AF1-204ENST00000459639 AAMPQ13685 434 aa31.18■■■□□ 2.58
U2AF1-204ENST00000459639 MVPQ14764 893 aaKnown RBP31.16■■■□□ 2.58
U2AF1-204ENST00000459639 THRAP3Q9Y2W1 955 aaKnown RBP31.16■■■□□ 2.58
U2AF1-204ENST00000459639 SPATA31A1Q5TZJ5 1347 aa31.15■■■□□ 2.58
U2AF1-204ENST00000459639 CCDC30Q5VVM6 783 aa31.15■■■□□ 2.58
U2AF1-204ENST00000459639 PELP1Q8IZL8 1130 aaKnown RBP31.15■■■□□ 2.58
U2AF1-204ENST00000459639 CHMP4AQ9BY43 222 aa31.15■■■□□ 2.58
U2AF1-204ENST00000459639 API5Q9BZZ5 524 aaKnown RBP31.15■■■□□ 2.58
U2AF1-204ENST00000459639 HEG1Q9ULI3 1381 aa31.14■■■□□ 2.58
U2AF1-204ENST00000459639 KCNQ3O43525 872 aa31.14■■■□□ 2.58
U2AF1-204ENST00000459639 LRP6O75581 1613 aa31.14■■■□□ 2.58
U2AF1-204ENST00000459639 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.14■■■□□ 2.57
U2AF1-204ENST00000459639 TOGARAM1Q9Y4F4 1720 aa31.14■■■□□ 2.57
U2AF1-204ENST00000459639 CDCA7Q9BWT1 371 aaPredicted RBP31.13■■■□□ 2.57
U2AF1-204ENST00000459639 NFATC2IPQ8NCF5 419 aa31.13■■■□□ 2.57
U2AF1-204ENST00000459639 STK31Q9BXU1 1019 aa31.13■■■□□ 2.57
U2AF1-204ENST00000459639 PTPRCP08575 1304 aa31.12■■■□□ 2.57
U2AF1-204ENST00000459639 HSPA1LP34931 641 aa31.12■■■□□ 2.57
U2AF1-204ENST00000459639 ABCC4O15439 1325 aa31.12■■■□□ 2.57
U2AF1-204ENST00000459639 SPATA31A5Q5VU36 1347 aa31.12■■■□□ 2.57
U2AF1-204ENST00000459639 SPATA31A7Q8IWB4 1347 aa31.12■■■□□ 2.57
U2AF1-204ENST00000459639 TNS2Q63HR2 1409 aa31.11■■■□□ 2.57
U2AF1-204ENST00000459639 PAPPAQ13219 1627 aa31.11■■■□□ 2.57
U2AF1-204ENST00000459639 ERVV-2B6SEH9 535 aa31.11■■■□□ 2.57
U2AF1-204ENST00000459639 CABP4P57796 275 aa31.11■■■□□ 2.57
U2AF1-204ENST00000459639 DDX54Q8TDD1 881 aaKnown RBP31.1■■■□□ 2.57
U2AF1-204ENST00000459639 DDX19BQ9UMR2 479 aa31.1■■■□□ 2.57
U2AF1-204ENST00000459639 SLC4A2P04920 1241 aa31.09■■■□□ 2.57
U2AF1-204ENST00000459639 ZNF790Q6PG37 636 aa31.09■■■□□ 2.57
U2AF1-204ENST00000459639 HDGFL1Q5TGJ6 251 aa31.09■■■□□ 2.57
U2AF1-204ENST00000459639 UNC5CLQ8IV45 518 aa31.09■■■□□ 2.57
U2AF1-204ENST00000459639 TMEM57Q8N5G2 664 aa31.09■■■□□ 2.57
U2AF1-204ENST00000459639 RGS12O14924 1447 aa31.08■■■□□ 2.57
U2AF1-204ENST00000459639 C5P01031 1676 aa31.07■■■□□ 2.56
U2AF1-204ENST00000459639 UBR2Q8IWV8 1755 aa31.07■■■□□ 2.56
U2AF1-204ENST00000459639 ITPRIPQ8IWB1 547 aa31.07■■■□□ 2.56
U2AF1-204ENST00000459639 BCL9LQ86UU0 1499 aa31.07■■■□□ 2.56
U2AF1-204ENST00000459639 NGLY1Q96IV0 654 aa31.06■■■□□ 2.56
U2AF1-204ENST00000459639 C8orf37Q96NL8 207 aa31.06■■■□□ 2.56
U2AF1-204ENST00000459639 GIGYF1O75420 1035 aaPredicted RBP31.05■■■□□ 2.56
U2AF1-204ENST00000459639 FNBP4Q8N3X1 1017 aaPredicted RBP31.05■■■□□ 2.56
U2AF1-204ENST00000459639 BARGINQ6ZT62 677 aa31.04■■■□□ 2.56
U2AF1-204ENST00000459639 ITGB4P16144 1822 aa31.04■■■□□ 2.56
U2AF1-204ENST00000459639 EXOC5O00471 708 aa31.03■■■□□ 2.56
U2AF1-204ENST00000459639 SLC39A6Q13433 755 aa31.03■■■□□ 2.56
U2AF1-204ENST00000459639 LAMB4A4D0S4 1761 aa31.03■■■□□ 2.56
U2AF1-204ENST00000459639 TTC5Q8N0Z6 440 aa31.03■■■□□ 2.56
U2AF1-204ENST00000459639 GLI3P10071 1580 aa31.03■■■□□ 2.56
U2AF1-204ENST00000459639 N4BP2Q86UW6 1770 aaPredicted RBP31.02■■■□□ 2.56
U2AF1-204ENST00000459639 VPS72Q15906 364 aa31.01■■■□□ 2.55
U2AF1-204ENST00000459639 NECTIN2Q92692 538 aa31.01■■■□□ 2.55
U2AF1-204ENST00000459639 CHMP4BQ9H444 224 aaKnown RBP31■■■□□ 2.55
U2AF1-204ENST00000459639 CCDC9Q9Y3X0 531 aaKnown RBP31■■■□□ 2.55
U2AF1-204ENST00000459639 G2E3Q7L622 706 aa31■■■□□ 2.55
U2AF1-204ENST00000459639 EIF2S2P20042 333 aaKnown RBP30.99■■■□□ 2.55
U2AF1-204ENST00000459639 KDM2BQ8NHM5 1336 aa30.98■■■□□ 2.55
U2AF1-204ENST00000459639 FLIIQ13045 1269 aa30.98■■■□□ 2.55
U2AF1-204ENST00000459639 FMNL2Q96PY5 1086 aa30.98■■■□□ 2.55
U2AF1-204ENST00000459639 INTS3Q68E01 1043 aaKnown RBP30.97■■■□□ 2.55
U2AF1-204ENST00000459639 ZNF496Q96IT1 587 aaPredicted RBP30.97■■■□□ 2.55
U2AF1-204ENST00000459639 DOT1LQ8TEK3 1739 aa30.97■■■□□ 2.55
U2AF1-204ENST00000459639 CENPQQ7L2Z9 268 aaPredicted RBP30.97■■■□□ 2.55
U2AF1-204ENST00000459639 KCPQ6ZWJ8 1503 aa30.96■■■□□ 2.55
U2AF1-204ENST00000459639 DDB1Q16531 1140 aa30.96■■■□□ 2.55
U2AF1-204ENST00000459639 CHPF2Q9P2E5 772 aa30.95■■■□□ 2.55
U2AF1-204ENST00000459639 DBF4Q9UBU7 674 aaPredicted RBP30.95■■■□□ 2.55
U2AF1-204ENST00000459639 PXDNLA1KZ92 1463 aa30.94■■■□□ 2.54
U2AF1-204ENST00000459639 MEX3CQ5U5Q3 659 aaKnown RBP30.94■■■□□ 2.54
U2AF1-204ENST00000459639 ZBTB40Q9NUA8 1239 aa30.94■■■□□ 2.54
U2AF1-204ENST00000459639 TMOD3Q9NYL9 352 aa30.94■■■□□ 2.54
U2AF1-204ENST00000459639 SNRPA1P09661 255 aaKnown RBP30.93■■■□□ 2.54
U2AF1-204ENST00000459639 USP21Q9UK80 565 aa30.93■■■□□ 2.54
U2AF1-204ENST00000459639 PRAMEF22A3QJZ6 481 aa30.92■■■□□ 2.54
U2AF1-204ENST00000459639 FKBP5Q13451 457 aaPredicted RBP30.92■■■□□ 2.54
U2AF1-204ENST00000459639 ZBTB7BO15156 539 aaPredicted RBP30.91■■■□□ 2.54
U2AF1-204ENST00000459639 PCDHB15Q9Y5E8 787 aa30.91■■■□□ 2.54
U2AF1-204ENST00000459639 THSD7AQ9UPZ6 1657 aa30.89■■■□□ 2.54
U2AF1-204ENST00000459639 CCT4P50991 539 aaKnown RBP30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms