RNA–Protein interactions for RNA: ENST00000458625.5

CCL25-204, Transcript of C-C motif chemokine ligand 25, humanhuman

TSL 5

Gene CCL25, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL25-204ENST00000458625 ARFGEF1Q9Y6D6 1849 aa16.91■□□□□ 0.3
CCL25-204ENST00000458625 FCHSD2O94868 740 aa16.91■□□□□ 0.3
CCL25-204ENST00000458625 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
CCL25-204ENST00000458625 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
CCL25-204ENST00000458625 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
CCL25-204ENST00000458625 CARD11Q9BXL7 1154 aa16.91■□□□□ 0.3
CCL25-204ENST00000458625 INSRP06213 1382 aa16.9■□□□□ 0.3
CCL25-204ENST00000458625 C4AP0C0L4 1744 aa16.9■□□□□ 0.3
CCL25-204ENST00000458625 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
CCL25-204ENST00000458625 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
CCL25-204ENST00000458625 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
CCL25-204ENST00000458625 RRAGCQ9HB90 399 aa16.9■□□□□ 0.3
CCL25-204ENST00000458625 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.3
CCL25-204ENST00000458625 FYB1O15117 783 aa16.89■□□□□ 0.29
CCL25-204ENST00000458625 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
CCL25-204ENST00000458625 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
CCL25-204ENST00000458625 ATP6V1AP38606 617 aa16.88■□□□□ 0.29
CCL25-204ENST00000458625 SLC4A9Q96Q91 983 aa16.88■□□□□ 0.29
CCL25-204ENST00000458625 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
CCL25-204ENST00000458625 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
CCL25-204ENST00000458625 SBF1O95248 1867 aa16.87■□□□□ 0.29
CCL25-204ENST00000458625 TMF1P82094 1093 aa16.87■□□□□ 0.29
CCL25-204ENST00000458625 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
CCL25-204ENST00000458625 TESK2Q96S53 571 aa16.87■□□□□ 0.29
CCL25-204ENST00000458625 KDRP35968 1356 aa16.87■□□□□ 0.29
CCL25-204ENST00000458625 GYS1P13807 737 aa16.86■□□□□ 0.29
CCL25-204ENST00000458625 NLGN1Q8N2Q7 840 aa16.86■□□□□ 0.29
CCL25-204ENST00000458625 ARHGEF1Q92888 912 aaKnown RBP16.86■□□□□ 0.29
CCL25-204ENST00000458625 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
CCL25-204ENST00000458625 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
CCL25-204ENST00000458625 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
CCL25-204ENST00000458625 CCDC87Q9NVE4 849 aa16.85■□□□□ 0.29
CCL25-204ENST00000458625 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
CCL25-204ENST00000458625 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
CCL25-204ENST00000458625 FLT4P35916 1363 aa16.85■□□□□ 0.29
CCL25-204ENST00000458625 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
CCL25-204ENST00000458625 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
CCL25-204ENST00000458625 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
CCL25-204ENST00000458625 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
CCL25-204ENST00000458625 PIM2Q9P1W9 311 aa16.82■□□□□ 0.28
CCL25-204ENST00000458625 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
CCL25-204ENST00000458625 PARP3Q9Y6F1 533 aa16.81■□□□□ 0.28
CCL25-204ENST00000458625 PHKG2P15735 406 aa16.8■□□□□ 0.28
CCL25-204ENST00000458625 CHRNA5P30532 468 aa16.8■□□□□ 0.28
CCL25-204ENST00000458625 DDR1Q08345 913 aa16.8■□□□□ 0.28
CCL25-204ENST00000458625 DALRD3Q5D0E6 543 aaKnown RBP16.8■□□□□ 0.28
CCL25-204ENST00000458625 SPG7Q9UQ90 795 aa16.8■□□□□ 0.28
CCL25-204ENST00000458625 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
CCL25-204ENST00000458625 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
CCL25-204ENST00000458625 KIF24Q5T7B8 1368 aa16.79■□□□□ 0.28
CCL25-204ENST00000458625 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
CCL25-204ENST00000458625 SLC34A2O95436 690 aa16.79■□□□□ 0.28
CCL25-204ENST00000458625 ADRA2BP18089 450 aa16.79■□□□□ 0.28
CCL25-204ENST00000458625 RASSF7Q02833 373 aa16.79■□□□□ 0.28
CCL25-204ENST00000458625 RC3H1Q5TC82 1133 aaKnown RBP16.79■□□□□ 0.28
CCL25-204ENST00000458625 TONSLQ96HA7 1378 aa16.78■□□□□ 0.28
CCL25-204ENST00000458625 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
CCL25-204ENST00000458625 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
CCL25-204ENST00000458625 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
CCL25-204ENST00000458625 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
CCL25-204ENST00000458625 RFC4P35249 363 aa16.77■□□□□ 0.28
CCL25-204ENST00000458625 FKBP8Q14318 412 aa16.77■□□□□ 0.28
CCL25-204ENST00000458625 EYA1Q99502 592 aa16.77■□□□□ 0.28
CCL25-204ENST00000458625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCL25-204ENST00000458625 IFNL2Q8IZJ0 200 aa16.76■□□□□ 0.27
CCL25-204ENST00000458625 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
CCL25-204ENST00000458625 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
CCL25-204ENST00000458625 POTECB2RU33 542 aa16.75■□□□□ 0.27
CCL25-204ENST00000458625 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
CCL25-204ENST00000458625 VEGFAP15692 232 aaPredicted RBP16.74■□□□□ 0.27
CCL25-204ENST00000458625 ADAMTS7Q9UKP4 1686 aa16.73■□□□□ 0.27
CCL25-204ENST00000458625 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
CCL25-204ENST00000458625 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
CCL25-204ENST00000458625 CARD14Q9BXL6 1004 aa16.72■□□□□ 0.27
CCL25-204ENST00000458625 TIAM2Q8IVF5 1701 aa16.72■□□□□ 0.27
CCL25-204ENST00000458625 USP42Q9H9J4 1324 aaKnown RBP16.71■□□□□ 0.27
CCL25-204ENST00000458625 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
CCL25-204ENST00000458625 CRKLP46109 303 aaKnown RBP16.71■□□□□ 0.27
CCL25-204ENST00000458625 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
CCL25-204ENST00000458625 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
CCL25-204ENST00000458625 FOXN1O15353 648 aa16.7■□□□□ 0.26
CCL25-204ENST00000458625 LMNB1P20700 586 aa16.7■□□□□ 0.26
CCL25-204ENST00000458625 TM4SF1P30408 202 aa16.7■□□□□ 0.26
CCL25-204ENST00000458625 TJP1Q07157 1748 aa16.7■□□□□ 0.26
CCL25-204ENST00000458625 ERVV-2B6SEH9 535 aa16.69■□□□□ 0.26
CCL25-204ENST00000458625 MKRN1Q9UHC7 482 aaKnown RBP16.69■□□□□ 0.26
CCL25-204ENST00000458625 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
CCL25-204ENST00000458625 DLEC1Q9Y238 1755 aa16.67■□□□□ 0.26
CCL25-204ENST00000458625 NFKBIEO00221 500 aa16.67■□□□□ 0.26
CCL25-204ENST00000458625 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
CCL25-204ENST00000458625 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
CCL25-204ENST00000458625 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
CCL25-204ENST00000458625 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
CCL25-204ENST00000458625 POTEJP0CG39 1038 aa16.65■□□□□ 0.26
CCL25-204ENST00000458625 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
CCL25-204ENST00000458625 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
CCL25-204ENST00000458625 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
CCL25-204ENST00000458625 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
CCL25-204ENST00000458625 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
CCL25-204ENST00000458625 CABP4P57796 275 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms