RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 PHKG2P15735 406 aa22.71■■□□□ 1.23
SHF-202ENST00000458022 ATG3Q9NT62 314 aa22.71■■□□□ 1.23
SHF-202ENST00000458022 A0A0G2JLW4 131 aa22.7■■□□□ 1.22
SHF-202ENST00000458022 IFNL2Q8IZJ0 200 aa22.7■■□□□ 1.22
SHF-202ENST00000458022 EYA1Q99502 592 aa22.7■■□□□ 1.22
SHF-202ENST00000458022 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
SHF-202ENST00000458022 WASHC2AQ641Q2 1341 aa22.7■■□□□ 1.22
SHF-202ENST00000458022 KIAA1551Q9HCM1 1747 aa22.69■■□□□ 1.22
SHF-202ENST00000458022 KDRP35968 1356 aa22.69■■□□□ 1.22
SHF-202ENST00000458022 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
SHF-202ENST00000458022 TRAPPC3LQ5T215 181 aa22.69■■□□□ 1.22
SHF-202ENST00000458022 NMRK2Q9NPI5 230 aa22.69■■□□□ 1.22
SHF-202ENST00000458022 RTCBQ9Y3I0 505 aaKnown RBP22.69■■□□□ 1.22
SHF-202ENST00000458022 KIF20BQ96Q89 1820 aa22.68■■□□□ 1.22
SHF-202ENST00000458022 ARHGAP27Q6ZUM4 889 aa22.68■■□□□ 1.22
SHF-202ENST00000458022 KIF13BQ9NQT8 1826 aa22.68■■□□□ 1.22
SHF-202ENST00000458022 PPM1GO15355 546 aaPredicted RBP22.67■■□□□ 1.22
SHF-202ENST00000458022 ADRA2BP18089 450 aa22.67■■□□□ 1.22
SHF-202ENST00000458022 DPEP1P16444 411 aa22.66■■□□□ 1.22
SHF-202ENST00000458022 RBM46Q8TBY0 533 aaKnown RBP22.66■■□□□ 1.22
SHF-202ENST00000458022 CCDC87Q9NVE4 849 aa22.66■■□□□ 1.22
SHF-202ENST00000458022 PLEKHG2Q9H7P9 1386 aa22.65■■□□□ 1.22
SHF-202ENST00000458022 FCHSD2O94868 740 aa22.65■■□□□ 1.22
SHF-202ENST00000458022 RC3H1Q5TC82 1133 aaKnown RBP22.65■■□□□ 1.22
SHF-202ENST00000458022 ARHGEF1Q92888 912 aaKnown RBP22.65■■□□□ 1.22
SHF-202ENST00000458022 SLC4A9Q96Q91 983 aa22.65■■□□□ 1.22
SHF-202ENST00000458022 GYS1P13807 737 aa22.64■■□□□ 1.21
SHF-202ENST00000458022 CNTNAP4Q9C0A0 1308 aa22.63■■□□□ 1.21
SHF-202ENST00000458022 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
SHF-202ENST00000458022 C9orf131Q5VYM1 1079 aa22.62■■□□□ 1.21
SHF-202ENST00000458022 ERVV-2B6SEH9 535 aa22.61■■□□□ 1.21
SHF-202ENST00000458022 RPS6KA4O75676 772 aa22.61■■□□□ 1.21
SHF-202ENST00000458022 KCNA3P22001 575 aa22.61■■□□□ 1.21
SHF-202ENST00000458022 POLKQ9UBT6 870 aa22.61■■□□□ 1.21
SHF-202ENST00000458022 PARP3Q9Y6F1 533 aa22.61■■□□□ 1.21
SHF-202ENST00000458022 N4BP2Q86UW6 1770 aaPredicted RBP22.61■■□□□ 1.21
SHF-202ENST00000458022 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
SHF-202ENST00000458022 RFC4P35249 363 aa22.6■■□□□ 1.21
SHF-202ENST00000458022 FSTL1Q12841 308 aa22.6■■□□□ 1.21
SHF-202ENST00000458022 JMYQ8N9B5 988 aa22.6■■□□□ 1.21
SHF-202ENST00000458022 KLRG1Q96E93 195 aa22.6■■□□□ 1.21
SHF-202ENST00000458022 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
SHF-202ENST00000458022 C16orf71Q8IYS4 520 aaPredicted RBP22.59■■□□□ 1.21
SHF-202ENST00000458022 ZNF831Q5JPB2 1677 aa22.58■■□□□ 1.21
SHF-202ENST00000458022 PIM2Q9P1W9 311 aa22.58■■□□□ 1.21
SHF-202ENST00000458022 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
SHF-202ENST00000458022 DCAF5Q96JK2 942 aa22.57■■□□□ 1.2
SHF-202ENST00000458022 WDR90Q96KV7 1748 aa22.57■■□□□ 1.2
SHF-202ENST00000458022 HSP90AB1P08238 724 aaKnown RBP22.56■■□□□ 1.2
SHF-202ENST00000458022 HTRA3P83110 453 aa22.56■■□□□ 1.2
SHF-202ENST00000458022 KDM2BQ8NHM5 1336 aa22.56■■□□□ 1.2
SHF-202ENST00000458022 DALRD3Q5D0E6 543 aaKnown RBP22.55■■□□□ 1.2
SHF-202ENST00000458022 COL13A1Q5TAT6 717 aaPredicted RBP22.54■■□□□ 1.2
SHF-202ENST00000458022 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
SHF-202ENST00000458022 KCPQ6ZWJ8 1503 aa22.53■■□□□ 1.2
SHF-202ENST00000458022 KDM6AO15550 1401 aaPredicted RBP22.53■■□□□ 1.2
SHF-202ENST00000458022 COL5A3P25940 1745 aaPredicted RBP22.53■■□□□ 1.2
SHF-202ENST00000458022 RNF181Q9P0P0 153 aa22.52■■□□□ 1.2
SHF-202ENST00000458022 USP42Q9H9J4 1324 aaKnown RBP22.52■■□□□ 1.2
SHF-202ENST00000458022 CABP4P57796 275 aa22.51■■□□□ 1.19
SHF-202ENST00000458022 DDR1Q08345 913 aa22.51■■□□□ 1.19
SHF-202ENST00000458022 PLEKHO1Q53GL0 409 aaPredicted RBP22.51■■□□□ 1.19
SHF-202ENST00000458022 CRKLP46109 303 aaKnown RBP22.5■■□□□ 1.19
SHF-202ENST00000458022 FKBP8Q14318 412 aa22.5■■□□□ 1.19
SHF-202ENST00000458022 RRAGCQ9HB90 399 aa22.5■■□□□ 1.19
SHF-202ENST00000458022 SRP68Q9UHB9 627 aaKnown RBP22.5■■□□□ 1.19
SHF-202ENST00000458022 ARFGEF1Q9Y6D6 1849 aa22.5■■□□□ 1.19
SHF-202ENST00000458022 AMOTQ4VCS5 1084 aa22.49■■□□□ 1.19
SHF-202ENST00000458022 PTCD1O75127 700 aaKnown RBP22.48■■□□□ 1.19
SHF-202ENST00000458022 ZNF530Q6P9A1 599 aaPredicted RBP22.48■■□□□ 1.19
SHF-202ENST00000458022 SMC1BQ8NDV3 1235 aa22.48■■□□□ 1.19
SHF-202ENST00000458022 CHRNA5P30532 468 aa22.47■■□□□ 1.19
SHF-202ENST00000458022 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
SHF-202ENST00000458022 ZC3H4Q9UPT8 1303 aaKnown RBP22.46■■□□□ 1.19
SHF-202ENST00000458022 POLRMTO00411 1230 aaKnown RBP22.45■■□□□ 1.18
SHF-202ENST00000458022 TM4SF1P30408 202 aa22.45■■□□□ 1.18
SHF-202ENST00000458022 MTHFSP49914 203 aa22.45■■□□□ 1.18
SHF-202ENST00000458022 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
SHF-202ENST00000458022 NFATC2IPQ8NCF5 419 aa22.44■■□□□ 1.18
SHF-202ENST00000458022 INTS5Q6P9B9 1019 aaKnown RBP22.43■■□□□ 1.18
SHF-202ENST00000458022 TNS4Q8IZW8 715 aa22.43■■□□□ 1.18
SHF-202ENST00000458022 TNRC6CQ9HCJ0 1690 aaKnown RBP22.42■■□□□ 1.18
SHF-202ENST00000458022 C1orf141Q5JVX7 400 aa22.42■■□□□ 1.18
SHF-202ENST00000458022 CAPN15O75808 1086 aa22.4■■□□□ 1.18
SHF-202ENST00000458022 PRELPP51888 382 aa22.4■■□□□ 1.18
SHF-202ENST00000458022 RASSF7Q02833 373 aa22.4■■□□□ 1.18
SHF-202ENST00000458022 AEBP1Q8IUX7 1158 aa22.4■■□□□ 1.18
SHF-202ENST00000458022 TJP1Q07157 1748 aa22.38■■□□□ 1.17
SHF-202ENST00000458022 GLTPD2A6NH11 291 aa22.38■■□□□ 1.17
SHF-202ENST00000458022 ZPR1O75312 459 aa22.38■■□□□ 1.17
SHF-202ENST00000458022 VEGFAP15692 232 aaPredicted RBP22.38■■□□□ 1.17
SHF-202ENST00000458022 LMNB1P20700 586 aa22.38■■□□□ 1.17
SHF-202ENST00000458022 USPL1Q5W0Q7 1092 aa22.38■■□□□ 1.17
SHF-202ENST00000458022 ADAMTS7Q9UKP4 1686 aa22.38■■□□□ 1.17
SHF-202ENST00000458022 SOS1Q07889 1333 aaPredicted RBP22.37■■□□□ 1.17
SHF-202ENST00000458022 DNAJC10Q8IXB1 793 aa22.36■■□□□ 1.17
SHF-202ENST00000458022 NFIXQ14938 502 aa22.35■■□□□ 1.17
SHF-202ENST00000458022 HSPA1AP0DMV8 641 aaKnown RBP22.34■■□□□ 1.17
SHF-202ENST00000458022 HSPA1BP0DMV9 641 aaKnown RBP22.34■■□□□ 1.17
SHF-202ENST00000458022 NARFQ9UHQ1 456 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms