RNA–Protein interactions for RNA: ENST00000457986.5

ATP13A3-205, Transcript of ATPase 13A3, humanhuman

TSL 3

Gene ATP13A3, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-205ENST00000457986 LINC00116Q8NCU8 138 aa33.48■■■□□ 2.95
ATP13A3-205ENST00000457986 CHD4Q14839 1912 aa33.47■■■□□ 2.95
ATP13A3-205ENST00000457986 PHF14O94880 888 aa33.47■■■□□ 2.95
ATP13A3-205ENST00000457986 SSFA2P28290 1259 aa33.47■■■□□ 2.95
ATP13A3-205ENST00000457986 MTHFSP49914 203 aa33.47■■■□□ 2.95
ATP13A3-205ENST00000457986 CC2D1BQ5T0F9 858 aaKnown RBP33.47■■■□□ 2.95
ATP13A3-205ENST00000457986 ZNF831Q5JPB2 1677 aa33.46■■■□□ 2.95
ATP13A3-205ENST00000457986 CABP4P57796 275 aa33.45■■■□□ 2.95
ATP13A3-205ENST00000457986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.44■■■□□ 2.94
ATP13A3-205ENST00000457986 ITPK1Q13572 414 aa33.44■■■□□ 2.94
ATP13A3-205ENST00000457986 GPR162Q16538 588 aa33.44■■■□□ 2.94
ATP13A3-205ENST00000457986 NPC1L1Q9UHC9 1359 aa33.44■■■□□ 2.94
ATP13A3-205ENST00000457986 GNPATO15228 680 aa33.42■■■□□ 2.94
ATP13A3-205ENST00000457986 AMIGO3Q86WK7 504 aa33.42■■■□□ 2.94
ATP13A3-205ENST00000457986 NLGN2Q8NFZ4 835 aa33.41■■■□□ 2.94
ATP13A3-205ENST00000457986 RBM42Q9BTD8 480 aaKnown RBP33.41■■■□□ 2.94
ATP13A3-205ENST00000457986 SCN11AQ9UI33 1791 aa33.4■■■□□ 2.94
ATP13A3-205ENST00000457986 PELP1Q8IZL8 1130 aaKnown RBP33.4■■■□□ 2.94
ATP13A3-205ENST00000457986 UTRNP46939 3433 aa33.4■■■□□ 2.94
ATP13A3-205ENST00000457986 COL5A3P25940 1745 aaPredicted RBP33.39■■■□□ 2.94
ATP13A3-205ENST00000457986 DIAPH1O60610 1272 aaKnown RBP33.37■■■□□ 2.93
ATP13A3-205ENST00000457986 AKAP4Q5JQC9 854 aa33.36■■■□□ 2.93
ATP13A3-205ENST00000457986 SMIM5Q71RC9 77 aa33.36■■■□□ 2.93
ATP13A3-205ENST00000457986 HMOX1P09601 288 aa33.35■■■□□ 2.93
ATP13A3-205ENST00000457986 CNGB1Q14028 1251 aaPredicted RBP33.33■■■□□ 2.93
ATP13A3-205ENST00000457986 SLC4A9Q96Q91 983 aa33.33■■■□□ 2.93
ATP13A3-205ENST00000457986 RTCBQ9Y3I0 505 aaKnown RBP33.33■■■□□ 2.93
ATP13A3-205ENST00000457986 CD2APQ9Y5K6 639 aa33.33■■■□□ 2.93
ATP13A3-205ENST00000457986 COL3A1P02461 1466 aaPredicted RBP33.31■■■□□ 2.92
ATP13A3-205ENST00000457986 CNTNAP4Q9C0A0 1308 aa33.31■■■□□ 2.92
ATP13A3-205ENST00000457986 VIRMAQ69YN4 1812 aaKnown RBP33.31■■■□□ 2.92
ATP13A3-205ENST00000457986 NFATC2IPQ8NCF5 419 aa33.31■■■□□ 2.92
ATP13A3-205ENST00000457986 CICQ96RK0 1608 aaPredicted RBP33.29■■■□□ 2.92
ATP13A3-205ENST00000457986 RC3H1Q5TC82 1133 aaKnown RBP33.29■■■□□ 2.92
ATP13A3-205ENST00000457986 MRC1P22897 1456 aa33.29■■■□□ 2.92
ATP13A3-205ENST00000457986 PTCD1O75127 700 aaKnown RBP33.28■■■□□ 2.92
ATP13A3-205ENST00000457986 ADRA2BP18089 450 aa33.27■■■□□ 2.92
ATP13A3-205ENST00000457986 TRAPPC3LQ5T215 181 aa33.27■■■□□ 2.92
ATP13A3-205ENST00000457986 TJP1Q07157 1748 aa33.26■■■□□ 2.92
ATP13A3-205ENST00000457986 GRIN3BO60391 1043 aa33.25■■■□□ 2.91
ATP13A3-205ENST00000457986 ZNF784Q8NCA9 323 aaPredicted RBP33.25■■■□□ 2.91
ATP13A3-205ENST00000457986 SLC52A2Q9HAB3 445 aa33.25■■■□□ 2.91
ATP13A3-205ENST00000457986 MYH14Q7Z406 1995 aaKnown RBP33.24■■■□□ 2.91
ATP13A3-205ENST00000457986 ADAMTS7Q9UKP4 1686 aa33.23■■■□□ 2.91
ATP13A3-205ENST00000457986 C4AP0C0L4 1744 aa33.23■■■□□ 2.91
ATP13A3-205ENST00000457986 U2SURPO15042 1029 aaKnown RBP33.23■■■□□ 2.91
ATP13A3-205ENST00000457986 RPS6KA4O75676 772 aa33.23■■■□□ 2.91
ATP13A3-205ENST00000457986 RNMTO43148 476 aaKnown RBP33.22■■■□□ 2.91
ATP13A3-205ENST00000457986 YBX3P16989 372 aaKnown RBP eCLIP33.22■■■□□ 2.91
ATP13A3-205ENST00000457986 MTHFSDQ2M296 383 aaKnown RBP33.22■■■□□ 2.91
ATP13A3-205ENST00000457986 GOLGB1Q14789 3259 aaKnown RBP33.2■■■□□ 2.91
ATP13A3-205ENST00000457986 LGR6Q9HBX8 967 aa33.2■■■□□ 2.91
ATP13A3-205ENST00000457986 MMP10P09238 476 aa33.19■■■□□ 2.9
ATP13A3-205ENST00000457986 RFC4P35249 363 aa33.19■■■□□ 2.9
ATP13A3-205ENST00000457986 CRKLP46109 303 aaKnown RBP33.19■■■□□ 2.9
ATP13A3-205ENST00000457986 ARHGEF1Q92888 912 aaKnown RBP33.19■■■□□ 2.9
ATP13A3-205ENST00000457986 CFAP53Q96M91 514 aa33.19■■■□□ 2.9
ATP13A3-205ENST00000457986 NLGN1Q8N2Q7 840 aa33.18■■■□□ 2.9
ATP13A3-205ENST00000457986 GAS2L2Q8NHY3 880 aa33.14■■■□□ 2.9
ATP13A3-205ENST00000457986 KIF13BQ9NQT8 1826 aa33.14■■■□□ 2.9
ATP13A3-205ENST00000457986 KCPQ6ZWJ8 1503 aa33.13■■■□□ 2.89
ATP13A3-205ENST00000457986 GYS1P13807 737 aa33.13■■■□□ 2.89
ATP13A3-205ENST00000457986 SLC39A6Q13433 755 aa33.11■■■□□ 2.89
ATP13A3-205ENST00000457986 DNAJC10Q8IXB1 793 aa33.1■■■□□ 2.89
ATP13A3-205ENST00000457986 UBR2Q8IWV8 1755 aa33.1■■■□□ 2.89
ATP13A3-205ENST00000457986 NUDCQ9Y266 331 aa33.09■■■□□ 2.89
ATP13A3-205ENST00000457986 C10orf71Q711Q0 1435 aa33.09■■■□□ 2.89
ATP13A3-205ENST00000457986 CCDC87Q9NVE4 849 aa33.08■■■□□ 2.89
ATP13A3-205ENST00000457986 PARP3Q9Y6F1 533 aa33.08■■■□□ 2.89
ATP13A3-205ENST00000457986 USP42Q9H9J4 1324 aaKnown RBP33.07■■■□□ 2.88
ATP13A3-205ENST00000457986 GNAT3A8MTJ3 354 aa33.07■■■□□ 2.88
ATP13A3-205ENST00000457986 PXDNLA1KZ92 1463 aa33.06■■■□□ 2.88
ATP13A3-205ENST00000457986 PPP2R1AP30153 589 aa33.06■■■□□ 2.88
ATP13A3-205ENST00000457986 TEFQ10587 303 aa33.06■■■□□ 2.88
ATP13A3-205ENST00000457986 INTS5Q6P9B9 1019 aaKnown RBP33.06■■■□□ 2.88
ATP13A3-205ENST00000457986 TTC5Q8N0Z6 440 aa33.06■■■□□ 2.88
ATP13A3-205ENST00000457986 WWC3Q9ULE0 1092 aa33.05■■■□□ 2.88
ATP13A3-205ENST00000457986 KIAA1551Q9HCM1 1747 aa33.05■■■□□ 2.88
ATP13A3-205ENST00000457986 PRKAR2BP31323 418 aa33.04■■■□□ 2.88
ATP13A3-205ENST00000457986 VSIG10Q8N0Z9 540 aa33.04■■■□□ 2.88
ATP13A3-205ENST00000457986 SRP68Q9UHB9 627 aaKnown RBP33.04■■■□□ 2.88
ATP13A3-205ENST00000457986 SIPA1L3O60292 1781 aaPredicted RBP33.04■■■□□ 2.88
ATP13A3-205ENST00000457986 CYP19A1P11511 503 aaPredicted RBP33.03■■■□□ 2.88
ATP13A3-205ENST00000457986 RSPH6AQ9H0K4 717 aa33.03■■■□□ 2.88
ATP13A3-205ENST00000457986 N4BP2Q86UW6 1770 aaPredicted RBP33.03■■■□□ 2.88
ATP13A3-205ENST00000457986 SOS1Q07889 1333 aaPredicted RBP33.02■■■□□ 2.88
ATP13A3-205ENST00000457986 TGFB2P61812 414 aa33.02■■■□□ 2.88
ATP13A3-205ENST00000457986 COL15A1P39059 1388 aa32.99■■■□□ 2.87
ATP13A3-205ENST00000457986 ZPR1O75312 459 aa32.99■■■□□ 2.87
ATP13A3-205ENST00000457986 U2AF1L5P0DN76 240 aaPredicted RBP32.99■■■□□ 2.87
ATP13A3-205ENST00000457986 U2AF1Q01081 240 aaKnown RBP eCLIP32.99■■■□□ 2.87
ATP13A3-205ENST00000457986 IL17REQ8NFR9 667 aa32.99■■■□□ 2.87
ATP13A3-205ENST00000457986 FKBP8Q14318 412 aa32.98■■■□□ 2.87
ATP13A3-205ENST00000457986 ZBTB1Q9Y2K1 713 aa32.98■■■□□ 2.87
ATP13A3-205ENST00000457986 CEMIPQ8WUJ3 1361 aa32.96■■■□□ 2.87
ATP13A3-205ENST00000457986 ZNF790Q6PG37 636 aa32.95■■■□□ 2.87
ATP13A3-205ENST00000457986 PHACTR3Q96KR7 559 aa32.95■■■□□ 2.87
ATP13A3-205ENST00000457986 ATP10DQ9P241 1426 aa32.94■■■□□ 2.86
ATP13A3-205ENST00000457986 GIGYF1O75420 1035 aaPredicted RBP32.94■■■□□ 2.86
ATP13A3-205ENST00000457986 STARD3NLO95772 234 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms