RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 LINC00116Q8NCU8 138 aa18.2■□□□□ 0.5
SMARCA2-216ENST00000457226 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
SMARCA2-216ENST00000457226 NPC1L1Q9UHC9 1359 aa18.19■□□□□ 0.5
SMARCA2-216ENST00000457226 GNPATO15228 680 aa18.19■□□□□ 0.5
SMARCA2-216ENST00000457226 PER1O15534 1290 aaPredicted RBP18.19■□□□□ 0.5
SMARCA2-216ENST00000457226 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
SMARCA2-216ENST00000457226 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
SMARCA2-216ENST00000457226 GRIN3BO60391 1043 aa18.18■□□□□ 0.5
SMARCA2-216ENST00000457226 PHF14O94880 888 aa18.18■□□□□ 0.5
SMARCA2-216ENST00000457226 ITPK1Q13572 414 aa18.18■□□□□ 0.5
SMARCA2-216ENST00000457226 RC3H1Q5TC82 1133 aaKnown RBP18.17■□□□□ 0.5
SMARCA2-216ENST00000457226 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
SMARCA2-216ENST00000457226 ZNF831Q5JPB2 1677 aa18.17■□□□□ 0.5
SMARCA2-216ENST00000457226 KDM6AO15550 1401 aaPredicted RBP18.16■□□□□ 0.5
SMARCA2-216ENST00000457226 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
SMARCA2-216ENST00000457226 ADRA2BP18089 450 aa18.16■□□□□ 0.5
SMARCA2-216ENST00000457226 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
SMARCA2-216ENST00000457226 NLGN2Q8NFZ4 835 aa18.16■□□□□ 0.5
SMARCA2-216ENST00000457226 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
SMARCA2-216ENST00000457226 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
SMARCA2-216ENST00000457226 CC2D1BQ5T0F9 858 aaKnown RBP18.15■□□□□ 0.5
SMARCA2-216ENST00000457226 TRAPPC3LQ5T215 181 aa18.14■□□□□ 0.49
SMARCA2-216ENST00000457226 CNTNAP4Q9C0A0 1308 aa18.14■□□□□ 0.49
SMARCA2-216ENST00000457226 UBR3Q6ZT12 1888 aa18.14■□□□□ 0.49
SMARCA2-216ENST00000457226 ZNF784Q8NCA9 323 aaPredicted RBP18.13■□□□□ 0.49
SMARCA2-216ENST00000457226 NFATC2IPQ8NCF5 419 aa18.13■□□□□ 0.49
SMARCA2-216ENST00000457226 AMIGO3Q86WK7 504 aa18.12■□□□□ 0.49
SMARCA2-216ENST00000457226 NLGN1Q8N2Q7 840 aa18.12■□□□□ 0.49
SMARCA2-216ENST00000457226 PTCD1O75127 700 aaKnown RBP18.1■□□□□ 0.49
SMARCA2-216ENST00000457226 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
SMARCA2-216ENST00000457226 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
SMARCA2-216ENST00000457226 HMOX1P09601 288 aa18.09■□□□□ 0.49
SMARCA2-216ENST00000457226 RFC4P35249 363 aa18.09■□□□□ 0.49
SMARCA2-216ENST00000457226 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
SMARCA2-216ENST00000457226 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
SMARCA2-216ENST00000457226 MMP10P09238 476 aa18.07■□□□□ 0.48
SMARCA2-216ENST00000457226 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.482e-6■□□□□ 10.1
SMARCA2-216ENST00000457226 UTRNP46939 3433 aa18.07■□□□□ 0.48
SMARCA2-216ENST00000457226 CHD4Q14839 1912 aa18.07■□□□□ 0.48
SMARCA2-216ENST00000457226 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
SMARCA2-216ENST00000457226 ARHGEF1Q92888 912 aaKnown RBP18.06■□□□□ 0.48
SMARCA2-216ENST00000457226 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
SMARCA2-216ENST00000457226 RNMTO43148 476 aaKnown RBP18.05■□□□□ 0.48
SMARCA2-216ENST00000457226 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
SMARCA2-216ENST00000457226 MTHFSDQ2M296 383 aaKnown RBP18.05■□□□□ 0.48
SMARCA2-216ENST00000457226 COL5A3P25940 1745 aaPredicted RBP18.05■□□□□ 0.48
SMARCA2-216ENST00000457226 MRC1P22897 1456 aa18.05■□□□□ 0.48
SMARCA2-216ENST00000457226 CICQ96RK0 1608 aaPredicted RBP18.05■□□□□ 0.48
SMARCA2-216ENST00000457226 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
SMARCA2-216ENST00000457226 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
SMARCA2-216ENST00000457226 COL3A1P02461 1466 aaPredicted RBP18.03■□□□□ 0.48
SMARCA2-216ENST00000457226 GYS1P13807 737 aa18.03■□□□□ 0.48
SMARCA2-216ENST00000457226 TGFB2P61812 414 aa18.03■□□□□ 0.48
SMARCA2-216ENST00000457226 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
SMARCA2-216ENST00000457226 CCDC87Q9NVE4 849 aa18.03■□□□□ 0.48
SMARCA2-216ENST00000457226 NUDCQ9Y266 331 aa18.03■□□□□ 0.48
SMARCA2-216ENST00000457226 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
SMARCA2-216ENST00000457226 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.48
SMARCA2-216ENST00000457226 GNAT3A8MTJ3 354 aa18.01■□□□□ 0.47
SMARCA2-216ENST00000457226 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
SMARCA2-216ENST00000457226 TTC5Q8N0Z6 440 aa18.01■□□□□ 0.47
SMARCA2-216ENST00000457226 TEFQ10587 303 aa18■□□□□ 0.47
SMARCA2-216ENST00000457226 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
SMARCA2-216ENST00000457226 USP42Q9H9J4 1324 aaKnown RBP17.99■□□□□ 0.47
SMARCA2-216ENST00000457226 GOLGB1Q14789 3259 aaKnown RBP17.99■□□□□ 0.47
SMARCA2-216ENST00000457226 C10orf71Q711Q0 1435 aa17.99■□□□□ 0.47
SMARCA2-216ENST00000457226 ZPR1O75312 459 aa17.99■□□□□ 0.47
SMARCA2-216ENST00000457226 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
SMARCA2-216ENST00000457226 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
SMARCA2-216ENST00000457226 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
SMARCA2-216ENST00000457226 TJP1Q07157 1748 aa17.98■□□□□ 0.47
SMARCA2-216ENST00000457226 STARD3NLO95772 234 aa17.97■□□□□ 0.47
SMARCA2-216ENST00000457226 CYP19A1P11511 503 aaPredicted RBP17.97■□□□□ 0.47
SMARCA2-216ENST00000457226 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
SMARCA2-216ENST00000457226 C4AP0C0L4 1744 aa17.97■□□□□ 0.47
SMARCA2-216ENST00000457226 PXDNLA1KZ92 1463 aa17.96■□□□□ 0.47
SMARCA2-216ENST00000457226 C1QTNF8P60827 252 aa17.96■□□□□ 0.47
SMARCA2-216ENST00000457226 SLC39A6Q13433 755 aa17.96■□□□□ 0.47
SMARCA2-216ENST00000457226 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
SMARCA2-216ENST00000457226 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.46
SMARCA2-216ENST00000457226 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
SMARCA2-216ENST00000457226 FCHSD2O94868 740 aa17.94■□□□□ 0.46
SMARCA2-216ENST00000457226 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
SMARCA2-216ENST00000457226 FKBP8Q14318 412 aa17.94■□□□□ 0.46
SMARCA2-216ENST00000457226 ZNF790Q6PG37 636 aa17.94■□□□□ 0.46
SMARCA2-216ENST00000457226 SRP68Q9UHB9 627 aaKnown RBP17.94■□□□□ 0.46
SMARCA2-216ENST00000457226 NARFQ9UHQ1 456 aa17.94■□□□□ 0.46
SMARCA2-216ENST00000457226 KIF13BQ9NQT8 1826 aa17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 COL15A1P39059 1388 aa17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 ATP10DQ9P241 1426 aa17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 A0A087WZG4 1122 aa17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 RSPH6AQ9H0K4 717 aa17.93■□□□□ 0.46
SMARCA2-216ENST00000457226 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
SMARCA2-216ENST00000457226 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
SMARCA2-216ENST00000457226 RTF1Q92541 710 aaKnown RBP17.92■□□□□ 0.46
SMARCA2-216ENST00000457226 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
SMARCA2-216ENST00000457226 ADCY9O60503 1353 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms