RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
PTCHD1-202ENST00000456522 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
PTCHD1-202ENST00000456522 LTN1O94822 1766 aa12.63□□□□□ -0.39
PTCHD1-202ENST00000456522 NFAT5O94916 1531 aa12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 AMPHP49418 695 aa12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
PTCHD1-202ENST00000456522 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
PTCHD1-202ENST00000456522 JCADQ9P266 1359 aa12.61□□□□□ -0.39
PTCHD1-202ENST00000456522 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
PTCHD1-202ENST00000456522 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
PTCHD1-202ENST00000456522 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
PTCHD1-202ENST00000456522 CCER2I3L3R5 266 aa12.6□□□□□ -0.39
PTCHD1-202ENST00000456522 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
PTCHD1-202ENST00000456522 CFAP53Q96M91 514 aa12.6□□□□□ -0.39
PTCHD1-202ENST00000456522 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
PTCHD1-202ENST00000456522 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
PTCHD1-202ENST00000456522 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
PTCHD1-202ENST00000456522 FECHP22830 423 aa12.58□□□□□ -0.4
PTCHD1-202ENST00000456522 PRDM11Q9NQV5 511 aa12.58□□□□□ -0.4
PTCHD1-202ENST00000456522 NPDC1Q9NQX5 325 aaPredicted RBP12.58□□□□□ -0.4
PTCHD1-202ENST00000456522 PCDHGA10Q9Y5H3 936 aa12.58□□□□□ -0.4
PTCHD1-202ENST00000456522 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
PTCHD1-202ENST00000456522 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
PTCHD1-202ENST00000456522 HOXC9P31274 260 aa12.57□□□□□ -0.4
PTCHD1-202ENST00000456522 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
PTCHD1-202ENST00000456522 IP6K1Q92551 441 aa12.57□□□□□ -0.4
PTCHD1-202ENST00000456522 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
PTCHD1-202ENST00000456522 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
PTCHD1-202ENST00000456522 CPDO75976 1380 aa12.56□□□□□ -0.4
PTCHD1-202ENST00000456522 FLT4P35916 1363 aa12.56□□□□□ -0.4
PTCHD1-202ENST00000456522 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
PTCHD1-202ENST00000456522 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
PTCHD1-202ENST00000456522 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
PTCHD1-202ENST00000456522 COL18A1P39060 1754 aa12.55□□□□□ -0.4
PTCHD1-202ENST00000456522 SPATA31A6Q5VVP1 1343 aa12.55□□□□□ -0.4
PTCHD1-202ENST00000456522 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 INSRP06213 1382 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
PTCHD1-202ENST00000456522 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 EIF4A2Q14240 407 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 PARP9Q8IXQ6 854 aa12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-202ENST00000456522 LRP6O75581 1613 aa12.52□□□□□ -0.4
PTCHD1-202ENST00000456522 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
PTCHD1-202ENST00000456522 IL13P35225 146 aa12.52□□□□□ -0.41
PTCHD1-202ENST00000456522 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.41
PTCHD1-202ENST00000456522 ANKRD24Q8TF21 1146 aa12.52□□□□□ -0.41
PTCHD1-202ENST00000456522 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
PTCHD1-202ENST00000456522 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 FOSBP53539 338 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 EVA1CP58658 441 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 STRN4Q9NRL3 753 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 BLMP54132 1417 aaPredicted RBP12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
PTCHD1-202ENST00000456522 MAP3K7O43318 606 aa12.5□□□□□ -0.41
PTCHD1-202ENST00000456522 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
PTCHD1-202ENST00000456522 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
PTCHD1-202ENST00000456522 ABCC6O95255 1503 aa12.5□□□□□ -0.41
PTCHD1-202ENST00000456522 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
PTCHD1-202ENST00000456522 ADAMTS8Q9UP79 889 aa12.49□□□□□ -0.41
PTCHD1-202ENST00000456522 ERBB3P21860 1342 aa12.48□□□□□ -0.41
PTCHD1-202ENST00000456522 HMOX1P09601 288 aa12.48□□□□□ -0.41
PTCHD1-202ENST00000456522 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
PTCHD1-202ENST00000456522 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
PTCHD1-202ENST00000456522 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
PTCHD1-202ENST00000456522 EYA1Q99502 592 aa12.48□□□□□ -0.41
PTCHD1-202ENST00000456522 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 TSR1Q2NL82 804 aaKnown RBP12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 AEBP1Q8IUX7 1158 aa12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 FAM117AQ9C073 453 aa12.47□□□□□ -0.41
PTCHD1-202ENST00000456522 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms