RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 ATP6V1AP38606 617 aa20.6■□□□□ 0.89
UBE2F-219ENST00000455999 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
UBE2F-219ENST00000455999 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
UBE2F-219ENST00000455999 POLKQ9UBT6 870 aa20.59■□□□□ 0.89
UBE2F-219ENST00000455999 VIRMAQ69YN4 1812 aaKnown RBP20.59■□□□□ 0.89
UBE2F-219ENST00000455999 IFNL2Q8IZJ0 200 aa20.58■□□□□ 0.89
UBE2F-219ENST00000455999 ATG3Q9NT62 314 aa20.58■□□□□ 0.89
UBE2F-219ENST00000455999 IFFO2Q5TF58 517 aa20.57■□□□□ 0.88
UBE2F-219ENST00000455999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.57■□□□□ 0.88
UBE2F-219ENST00000455999 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
UBE2F-219ENST00000455999 PXDNLA1KZ92 1463 aa20.56■□□□□ 0.88
UBE2F-219ENST00000455999 MMP10P09238 476 aa20.55■□□□□ 0.88
UBE2F-219ENST00000455999 HSPA6P17066 643 aa20.55■□□□□ 0.88
UBE2F-219ENST00000455999 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
UBE2F-219ENST00000455999 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
UBE2F-219ENST00000455999 KDRP35968 1356 aa20.55■□□□□ 0.88
UBE2F-219ENST00000455999 SLC4A9Q96Q91 983 aa20.54■□□□□ 0.88
UBE2F-219ENST00000455999 KIF3CO14782 793 aa20.53■□□□□ 0.88
UBE2F-219ENST00000455999 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
UBE2F-219ENST00000455999 SCN11AQ9UI33 1791 aa20.51■□□□□ 0.87
UBE2F-219ENST00000455999 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
UBE2F-219ENST00000455999 SBF1O95248 1867 aa20.51■□□□□ 0.87
UBE2F-219ENST00000455999 TJP1Q07157 1748 aa20.5■□□□□ 0.87
UBE2F-219ENST00000455999 A0A0G2JLW4 131 aa20.5■□□□□ 0.87
UBE2F-219ENST00000455999 RTCBQ9Y3I0 505 aaKnown RBP20.5■□□□□ 0.87
UBE2F-219ENST00000455999 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
UBE2F-219ENST00000455999 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
UBE2F-219ENST00000455999 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
UBE2F-219ENST00000455999 KDM6AO15550 1401 aaPredicted RBP20.49■□□□□ 0.87
UBE2F-219ENST00000455999 C10orf71Q711Q0 1435 aa20.49■□□□□ 0.87
UBE2F-219ENST00000455999 CCDC88AQ3V6T2 1871 aa20.47■□□□□ 0.87
UBE2F-219ENST00000455999 ERVV-2B6SEH9 535 aa20.46■□□□□ 0.87
UBE2F-219ENST00000455999 GYS1P13807 737 aa20.46■□□□□ 0.87
UBE2F-219ENST00000455999 DPEP1P16444 411 aa20.46■□□□□ 0.87
UBE2F-219ENST00000455999 TGFB2P61812 414 aa20.46■□□□□ 0.87
UBE2F-219ENST00000455999 NLGN1Q8N2Q7 840 aa20.46■□□□□ 0.87
UBE2F-219ENST00000455999 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
UBE2F-219ENST00000455999 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
UBE2F-219ENST00000455999 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
UBE2F-219ENST00000455999 ADAMTS7Q9UKP4 1686 aa20.45■□□□□ 0.86
UBE2F-219ENST00000455999 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
UBE2F-219ENST00000455999 ARHGAP27Q6ZUM4 889 aa20.44■□□□□ 0.86
UBE2F-219ENST00000455999 DCAF5Q96JK2 942 aa20.44■□□□□ 0.86
UBE2F-219ENST00000455999 PLEKHG2Q9H7P9 1386 aa20.44■□□□□ 0.86
UBE2F-219ENST00000455999 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
UBE2F-219ENST00000455999 RPS6KA4O75676 772 aa20.43■□□□□ 0.86
UBE2F-219ENST00000455999 RFC4P35249 363 aa20.43■□□□□ 0.86
UBE2F-219ENST00000455999 PLEKHO1Q53GL0 409 aaPredicted RBP20.43■□□□□ 0.86
UBE2F-219ENST00000455999 AEBP1Q8IUX7 1158 aa20.43■□□□□ 0.86
UBE2F-219ENST00000455999 CCDC87Q9NVE4 849 aa20.43■□□□□ 0.86
UBE2F-219ENST00000455999 FCHSD2O94868 740 aa20.42■□□□□ 0.86
UBE2F-219ENST00000455999 ADRA2BP18089 450 aa20.42■□□□□ 0.86
UBE2F-219ENST00000455999 CABP4P57796 275 aa20.42■□□□□ 0.86
UBE2F-219ENST00000455999 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
UBE2F-219ENST00000455999 PTCD1O75127 700 aaKnown RBP20.41■□□□□ 0.86
UBE2F-219ENST00000455999 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
UBE2F-219ENST00000455999 NMRK2Q9NPI5 230 aa20.41■□□□□ 0.86
UBE2F-219ENST00000455999 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
UBE2F-219ENST00000455999 KCNA3P22001 575 aa20.4■□□□□ 0.86
UBE2F-219ENST00000455999 PANK3Q9H999 370 aa20.4■□□□□ 0.86
UBE2F-219ENST00000455999 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
UBE2F-219ENST00000455999 TOMM70O94826 608 aa20.38■□□□□ 0.85
UBE2F-219ENST00000455999 CRKLP46109 303 aaKnown RBP20.38■□□□□ 0.85
UBE2F-219ENST00000455999 MTHFSP49914 203 aa20.38■□□□□ 0.85
UBE2F-219ENST00000455999 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
UBE2F-219ENST00000455999 NFATC2IPQ8NCF5 419 aa20.38■□□□□ 0.85
UBE2F-219ENST00000455999 FKBP8Q14318 412 aa20.37■□□□□ 0.85
UBE2F-219ENST00000455999 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
UBE2F-219ENST00000455999 APLP1P51693 650 aa20.36■□□□□ 0.85
UBE2F-219ENST00000455999 DDR1Q08345 913 aa20.36■□□□□ 0.85
UBE2F-219ENST00000455999 C9orf131Q5VYM1 1079 aa20.36■□□□□ 0.85
UBE2F-219ENST00000455999 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
UBE2F-219ENST00000455999 C1orf141Q5JVX7 400 aa20.35■□□□□ 0.85
UBE2F-219ENST00000455999 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
UBE2F-219ENST00000455999 USP42Q9H9J4 1324 aaKnown RBP20.34■□□□□ 0.85
UBE2F-219ENST00000455999 KCPQ6ZWJ8 1503 aa20.34■□□□□ 0.85
UBE2F-219ENST00000455999 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
UBE2F-219ENST00000455999 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
UBE2F-219ENST00000455999 DNAJC5GQ8N7S2 189 aa20.34■□□□□ 0.85
UBE2F-219ENST00000455999 PIM2Q9P1W9 311 aa20.34■□□□□ 0.85
UBE2F-219ENST00000455999 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.85
UBE2F-219ENST00000455999 CHRNA5P30532 468 aa20.33■□□□□ 0.85
UBE2F-219ENST00000455999 INTS5Q6P9B9 1019 aaKnown RBP20.33■□□□□ 0.85
UBE2F-219ENST00000455999 MORC1Q86VD1 984 aa20.33■□□□□ 0.85
UBE2F-219ENST00000455999 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
UBE2F-219ENST00000455999 DALRD3Q5D0E6 543 aaKnown RBP20.31■□□□□ 0.84
UBE2F-219ENST00000455999 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
UBE2F-219ENST00000455999 HTRA3P83110 453 aa20.3■□□□□ 0.84
UBE2F-219ENST00000455999 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
UBE2F-219ENST00000455999 CACNA1SQ13698 1873 aa20.3■□□□□ 0.84
UBE2F-219ENST00000455999 POLRMTO00411 1230 aaKnown RBP20.29■□□□□ 0.84
UBE2F-219ENST00000455999 TM4SF1P30408 202 aa20.29■□□□□ 0.84
UBE2F-219ENST00000455999 IL13P35225 146 aa20.29■□□□□ 0.84
UBE2F-219ENST00000455999 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
UBE2F-219ENST00000455999 RNF181Q9P0P0 153 aa20.29■□□□□ 0.84
UBE2F-219ENST00000455999 TIAM2Q8IVF5 1701 aa20.29■□□□□ 0.84
UBE2F-219ENST00000455999 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
UBE2F-219ENST00000455999 RBM46Q8TBY0 533 aaKnown RBP20.28■□□□□ 0.84
UBE2F-219ENST00000455999 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
UBE2F-219ENST00000455999 MRC1P22897 1456 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms