RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 KCPQ6ZWJ8 1503 aa22■■□□□ 1.11
NELFE-207ENST00000454913 C10orf71Q711Q0 1435 aa21.99■■□□□ 1.11
NELFE-207ENST00000454913 ARFGEF1Q9Y6D6 1849 aa21.99■■□□□ 1.11
NELFE-207ENST00000454913 DPEP1P16444 411 aa21.98■■□□□ 1.11
NELFE-207ENST00000454913 ATP6V1AP38606 617 aa21.98■■□□□ 1.11
NELFE-207ENST00000454913 CCDC87Q9NVE4 849 aa21.98■■□□□ 1.11
NELFE-207ENST00000454913 TNRC6CQ9HCJ0 1690 aaKnown RBP21.98■■□□□ 1.11
NELFE-207ENST00000454913 ITPK1Q13572 414 aa21.96■■□□□ 1.11
NELFE-207ENST00000454913 HSP90AB2PQ58FF8 381 aa21.96■■□□□ 1.11
NELFE-207ENST00000454913 NLGN1Q8N2Q7 840 aa21.96■■□□□ 1.11
NELFE-207ENST00000454913 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
NELFE-207ENST00000454913 RRAGCQ9HB90 399 aa21.96■■□□□ 1.11
NELFE-207ENST00000454913 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
NELFE-207ENST00000454913 C4AP0C0L4 1744 aa21.96■■□□□ 1.11
NELFE-207ENST00000454913 TMF1P82094 1093 aa21.95■■□□□ 1.1
NELFE-207ENST00000454913 RNF181Q9P0P0 153 aa21.95■■□□□ 1.1
NELFE-207ENST00000454913 INSRP06213 1382 aa21.95■■□□□ 1.1
NELFE-207ENST00000454913 TRAPPC3LQ5T215 181 aa21.94■■□□□ 1.1
NELFE-207ENST00000454913 GGNBP2Q9H3C7 697 aa21.94■■□□□ 1.1
NELFE-207ENST00000454913 ASAP1Q9ULH1 1129 aa21.94■■□□□ 1.1
NELFE-207ENST00000454913 RTCBQ9Y3I0 505 aaKnown RBP21.94■■□□□ 1.1
NELFE-207ENST00000454913 HSPA1AP0DMV8 641 aaKnown RBP21.93■■□□□ 1.1
NELFE-207ENST00000454913 HSPA1BP0DMV9 641 aaKnown RBP21.93■■□□□ 1.1
NELFE-207ENST00000454913 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
NELFE-207ENST00000454913 PARP3Q9Y6F1 533 aa21.93■■□□□ 1.1
NELFE-207ENST00000454913 FLT4P35916 1363 aa21.92■■□□□ 1.1
NELFE-207ENST00000454913 SPG7Q9UQ90 795 aa21.92■■□□□ 1.1
NELFE-207ENST00000454913 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
NELFE-207ENST00000454913 PIM2Q9P1W9 311 aa21.9■■□□□ 1.1
NELFE-207ENST00000454913 KIF20BQ96Q89 1820 aa21.9■■□□□ 1.1
NELFE-207ENST00000454913 FYB1O15117 783 aa21.89■■□□□ 1.09
NELFE-207ENST00000454913 SBF1O95248 1867 aa21.88■■□□□ 1.09
NELFE-207ENST00000454913 RFC4P35249 363 aa21.88■■□□□ 1.09
NELFE-207ENST00000454913 DALRD3Q5D0E6 543 aaKnown RBP21.88■■□□□ 1.09
NELFE-207ENST00000454913 KCNA3P22001 575 aa21.87■■□□□ 1.09
NELFE-207ENST00000454913 ARHGEF1Q92888 912 aaKnown RBP21.87■■□□□ 1.09
NELFE-207ENST00000454913 DCAF5Q96JK2 942 aa21.87■■□□□ 1.09
NELFE-207ENST00000454913 GYS1P13807 737 aa21.86■■□□□ 1.09
NELFE-207ENST00000454913 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
NELFE-207ENST00000454913 KIF24Q5T7B8 1368 aa21.86■■□□□ 1.09
NELFE-207ENST00000454913 ADRA2BP18089 450 aa21.85■■□□□ 1.09
NELFE-207ENST00000454913 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
NELFE-207ENST00000454913 COL5A3P25940 1745 aaPredicted RBP21.84■■□□□ 1.09
NELFE-207ENST00000454913 PPM1GO15355 546 aaPredicted RBP21.82■■□□□ 1.08
NELFE-207ENST00000454913 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
NELFE-207ENST00000454913 KDRP35968 1356 aa21.82■■□□□ 1.08
NELFE-207ENST00000454913 PHKG2P15735 406 aa21.81■■□□□ 1.08
NELFE-207ENST00000454913 EMILIN1Q9Y6C2 1016 aa21.81■■□□□ 1.08
NELFE-207ENST00000454913 ZNF831Q5JPB2 1677 aa21.81■■□□□ 1.08
NELFE-207ENST00000454913 ST20-MTHFSA0A0A6YYL1 179 aa21.8■■□□□ 1.08
NELFE-207ENST00000454913 RPS6KA4O75676 772 aa21.8■■□□□ 1.08
NELFE-207ENST00000454913 CHRNA5P30532 468 aa21.8■■□□□ 1.08
NELFE-207ENST00000454913 RC3H1Q5TC82 1133 aaKnown RBP21.8■■□□□ 1.08
NELFE-207ENST00000454913 TESK2Q96S53 571 aa21.8■■□□□ 1.08
NELFE-207ENST00000454913 NCAPD2Q15021 1401 aa21.8■■□□□ 1.08
NELFE-207ENST00000454913 CNTNAP4Q9C0A0 1308 aa21.8■■□□□ 1.08
NELFE-207ENST00000454913 VEGFAP15692 232 aaPredicted RBP21.79■■□□□ 1.08
NELFE-207ENST00000454913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.082e-7■■□□□ 13.6
NELFE-207ENST00000454913 SLC24A1O60721 1099 aa21.78■■□□□ 1.08
NELFE-207ENST00000454913 RASSF7Q02833 373 aa21.78■■□□□ 1.08
NELFE-207ENST00000454913 SLC4A9Q96Q91 983 aa21.78■■□□□ 1.08
NELFE-207ENST00000454913 MYH14Q7Z406 1995 aaKnown RBP21.78■■□□□ 1.08
NELFE-207ENST00000454913 ZC3H4Q9UPT8 1303 aaKnown RBP21.77■■□□□ 1.07
NELFE-207ENST00000454913 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
NELFE-207ENST00000454913 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
NELFE-207ENST00000454913 CCDC88AQ3V6T2 1871 aa21.75■■□□□ 1.07
NELFE-207ENST00000454913 EYA1Q99502 592 aa21.75■■□□□ 1.07
NELFE-207ENST00000454913 SRP68Q9UHB9 627 aaKnown RBP21.75■■□□□ 1.07
NELFE-207ENST00000454913 GLTPD2A6NH11 291 aa21.74■■□□□ 1.07
NELFE-207ENST00000454913 DDR1Q08345 913 aa21.74■■□□□ 1.07
NELFE-207ENST00000454913 FKBP8Q14318 412 aa21.74■■□□□ 1.07
NELFE-207ENST00000454913 ANKRD26Q9UPS8 1709 aa21.74■■□□□ 1.07
NELFE-207ENST00000454913 LMNB1P20700 586 aa21.73■■□□□ 1.07
NELFE-207ENST00000454913 ERVV-2B6SEH9 535 aa21.71■■□□□ 1.07
NELFE-207ENST00000454913 SLC34A2O95436 690 aa21.71■■□□□ 1.07
NELFE-207ENST00000454913 USP42Q9H9J4 1324 aaKnown RBP21.71■■□□□ 1.07
NELFE-207ENST00000454913 CRKLP46109 303 aaKnown RBP21.7■■□□□ 1.06
NELFE-207ENST00000454913 MKRN1Q9UHC7 482 aaKnown RBP21.7■■□□□ 1.06
NELFE-207ENST00000454913 KDM6AO15550 1401 aaPredicted RBP21.7■■□□□ 1.06
NELFE-207ENST00000454913 PTCD1O75127 700 aaKnown RBP21.69■■□□□ 1.06
NELFE-207ENST00000454913 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
NELFE-207ENST00000454913 CABP4P57796 275 aa21.68■■□□□ 1.06
NELFE-207ENST00000454913 POLRMTO00411 1230 aaKnown RBP21.67■■□□□ 1.06
NELFE-207ENST00000454913 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
NELFE-207ENST00000454913 AFDNP55196 1824 aaKnown RBP21.66■■□□□ 1.06
NELFE-207ENST00000454913 DLEC1Q9Y238 1755 aa21.66■■□□□ 1.06
NELFE-207ENST00000454913 FOXN1O15353 648 aa21.65■■□□□ 1.06
NELFE-207ENST00000454913 DPY19L2Q6NUT2 758 aa21.65■■□□□ 1.06
NELFE-207ENST00000454913 CREBZFQ9NS37 354 aa21.65■■□□□ 1.06
NELFE-207ENST00000454913 TJP1Q07157 1748 aa21.65■■□□□ 1.06
NELFE-207ENST00000454913 ZPR1O75312 459 aa21.64■■□□□ 1.05
NELFE-207ENST00000454913 TM4SF1P30408 202 aa21.63■■□□□ 1.05
NELFE-207ENST00000454913 TTLL6Q8N841 843 aa21.63■■□□□ 1.05
NELFE-207ENST00000454913 AIDAQ96BJ3 306 aa21.63■■□□□ 1.05
NELFE-207ENST00000454913 USPL1Q5W0Q7 1092 aa21.62■■□□□ 1.05
NELFE-207ENST00000454913 PRDM10Q9NQV6 1147 aa21.62■■□□□ 1.05
NELFE-207ENST00000454913 ADAMTS7Q9UKP4 1686 aa21.61■■□□□ 1.05
NELFE-207ENST00000454913 POTECB2RU33 542 aa21.61■■□□□ 1.05
NELFE-207ENST00000454913 ZNF530Q6P9A1 599 aaPredicted RBP21.61■■□□□ 1.05
NELFE-207ENST00000454913 CARD14Q9BXL6 1004 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms