RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 KIF13BQ9NQT8 1826 aa35.51■■■■□ 3.28
NEK6-211ENST00000454453 ATG3Q9NT62 314 aa35.51■■■■□ 3.28
NEK6-211ENST00000454453 PXDNLA1KZ92 1463 aa35.51■■■■□ 3.28
NEK6-211ENST00000454453 MMP10P09238 476 aa35.48■■■■□ 3.27
NEK6-211ENST00000454453 IFNL2Q8IZJ0 200 aa35.48■■■■□ 3.27
NEK6-211ENST00000454453 KDRP35968 1356 aa35.48■■■■□ 3.27
NEK6-211ENST00000454453 SLC4A9Q96Q91 983 aa35.47■■■■□ 3.27
NEK6-211ENST00000454453 POLKQ9UBT6 870 aa35.47■■■■□ 3.27
NEK6-211ENST00000454453 N4BP2Q86UW6 1770 aaPredicted RBP35.46■■■■□ 3.27
NEK6-211ENST00000454453 EIF4A2Q14240 407 aaKnown RBP35.41■■■■□ 3.26
NEK6-211ENST00000454453 C10orf71Q711Q0 1435 aa35.4■■■■□ 3.26
NEK6-211ENST00000454453 ZNF831Q5JPB2 1677 aa35.4■■■■□ 3.26
NEK6-211ENST00000454453 A0A0G2JLW4 131 aa35.39■■■■□ 3.26
NEK6-211ENST00000454453 COL5A3P25940 1745 aaPredicted RBP35.39■■■■□ 3.26
NEK6-211ENST00000454453 TGFB2P61812 414 aa35.38■■■■□ 3.25
NEK6-211ENST00000454453 TRAPPC3LQ5T215 181 aa35.38■■■■□ 3.25
NEK6-211ENST00000454453 RTCBQ9Y3I0 505 aaKnown RBP35.37■■■■□ 3.25
NEK6-211ENST00000454453 ARHGEF1Q92888 912 aaKnown RBP35.36■■■■□ 3.25
NEK6-211ENST00000454453 BCS1LQ9Y276 419 aa35.36■■■■□ 3.25
NEK6-211ENST00000454453 C4AP0C0L4 1744 aa35.35■■■■□ 3.25
NEK6-211ENST00000454453 NLGN1Q8N2Q7 840 aa35.34■■■■□ 3.25
NEK6-211ENST00000454453 BRCA1P38398 1863 aaKnown RBP35.33■■■■□ 3.25
NEK6-211ENST00000454453 GYS1P13807 737 aa35.33■■■■□ 3.25
NEK6-211ENST00000454453 RBM42Q9BTD8 480 aaKnown RBP35.33■■■■□ 3.25
NEK6-211ENST00000454453 PLEKHG2Q9H7P9 1386 aa35.33■■■■□ 3.25
NEK6-211ENST00000454453 ERVV-2B6SEH9 535 aa35.32■■■■□ 3.24
NEK6-211ENST00000454453 DPEP1P16444 411 aa35.32■■■■□ 3.24
NEK6-211ENST00000454453 TNNT2P45379 298 aaPredicted RBP35.32■■■■□ 3.24
NEK6-211ENST00000454453 RC3H1Q5TC82 1133 aaKnown RBP35.32■■■■□ 3.24
NEK6-211ENST00000454453 KDM6AO15550 1401 aaPredicted RBP35.32■■■■□ 3.24
NEK6-211ENST00000454453 CNTNAP4Q9C0A0 1308 aa35.31■■■■□ 3.24
NEK6-211ENST00000454453 MYH14Q7Z406 1995 aaKnown RBP35.29■■■■□ 3.24
NEK6-211ENST00000454453 RPS6KA4O75676 772 aa35.29■■■■□ 3.24
NEK6-211ENST00000454453 ADRA2BP18089 450 aa35.29■■■■□ 3.24
NEK6-211ENST00000454453 KCNA3P22001 575 aa35.28■■■■□ 3.24
NEK6-211ENST00000454453 ARHGAP27Q6ZUM4 889 aa35.28■■■■□ 3.24
NEK6-211ENST00000454453 DCAF5Q96JK2 942 aa35.28■■■■□ 3.24
NEK6-211ENST00000454453 TOMM70O94826 608 aa35.27■■■■□ 3.24
NEK6-211ENST00000454453 DNAJC5GQ8N7S2 189 aa35.27■■■■□ 3.24
NEK6-211ENST00000454453 NMRK2Q9NPI5 230 aa35.27■■■■□ 3.24
NEK6-211ENST00000454453 CCDC87Q9NVE4 849 aa35.27■■■■□ 3.24
NEK6-211ENST00000454453 APLP1P51693 650 aa35.26■■■■□ 3.24
NEK6-211ENST00000454453 FCHSD2O94868 740 aa35.24■■■■□ 3.23
NEK6-211ENST00000454453 RFC4P35249 363 aa35.24■■■■□ 3.23
NEK6-211ENST00000454453 PARP3Q9Y6F1 533 aa35.23■■■■□ 3.23
NEK6-211ENST00000454453 HSP90AB1P08238 724 aaKnown RBP35.22■■■■□ 3.23
NEK6-211ENST00000454453 ARFGEF1Q9Y6D6 1849 aa35.21■■■■□ 3.23
NEK6-211ENST00000454453 PLEKHO1Q53GL0 409 aaPredicted RBP35.2■■■■□ 3.23
NEK6-211ENST00000454453 ZNF530Q6P9A1 599 aaPredicted RBP35.2■■■■□ 3.23
NEK6-211ENST00000454453 CABP4P57796 275 aa35.19■■■■□ 3.22
NEK6-211ENST00000454453 SRP68Q9UHB9 627 aaKnown RBP35.19■■■■□ 3.22
NEK6-211ENST00000454453 POLR3GLQ9BT43 218 aa35.18■■■■□ 3.22
NEK6-211ENST00000454453 TJP1Q07157 1748 aa35.18■■■■□ 3.22
NEK6-211ENST00000454453 PTCD1O75127 700 aaKnown RBP35.17■■■■□ 3.22
NEK6-211ENST00000454453 C9orf131Q5VYM1 1079 aa35.17■■■■□ 3.22
NEK6-211ENST00000454453 AEBP1Q8IUX7 1158 aa35.17■■■■□ 3.22
NEK6-211ENST00000454453 CRKLP46109 303 aaKnown RBP35.16■■■■□ 3.22
NEK6-211ENST00000454453 ADAMTS7Q9UKP4 1686 aa35.15■■■■□ 3.22
NEK6-211ENST00000454453 DDR1Q08345 913 aa35.15■■■■□ 3.22
NEK6-211ENST00000454453 FKBP8Q14318 412 aa35.15■■■■□ 3.22
NEK6-211ENST00000454453 WDR90Q96KV7 1748 aa35.15■■■■□ 3.22
NEK6-211ENST00000454453 AMOTQ4VCS5 1084 aa35.14■■■■□ 3.22
NEK6-211ENST00000454453 USP42Q9H9J4 1324 aaKnown RBP35.13■■■■□ 3.21
NEK6-211ENST00000454453 MTHFSP49914 203 aa35.12■■■■□ 3.21
NEK6-211ENST00000454453 NFATC2IPQ8NCF5 419 aa35.12■■■■□ 3.21
NEK6-211ENST00000454453 PIM2Q9P1W9 311 aa35.12■■■■□ 3.21
NEK6-211ENST00000454453 RBM46Q8TBY0 533 aaKnown RBP35.11■■■■□ 3.21
NEK6-211ENST00000454453 KCPQ6ZWJ8 1503 aa35.11■■■■□ 3.21
NEK6-211ENST00000454453 HTRA3P83110 453 aa35.09■■■■□ 3.21
NEK6-211ENST00000454453 CHRNA5P30532 468 aa35.08■■■■□ 3.21
NEK6-211ENST00000454453 PANK3Q9H999 370 aa35.08■■■■□ 3.21
NEK6-211ENST00000454453 DALRD3Q5D0E6 543 aaKnown RBP35.07■■■■□ 3.2
NEK6-211ENST00000454453 INTS5Q6P9B9 1019 aaKnown RBP35.07■■■■□ 3.2
NEK6-211ENST00000454453 C1orf141Q5JVX7 400 aa35.06■■■■□ 3.2
NEK6-211ENST00000454453 POLRMTO00411 1230 aaKnown RBP35.05■■■■□ 3.2
NEK6-211ENST00000454453 TIMELESSQ9UNS1 1208 aa35.05■■■■□ 3.2
NEK6-211ENST00000454453 SCN11AQ9UI33 1791 aa35.05■■■■□ 3.2
NEK6-211ENST00000454453 TM4SF1P30408 202 aa35.04■■■■□ 3.2
NEK6-211ENST00000454453 RNF181Q9P0P0 153 aa35.04■■■■□ 3.2
NEK6-211ENST00000454453 SBF1O95248 1867 aa35.03■■■■□ 3.2
NEK6-211ENST00000454453 SULT6B1Q6IMI4 303 aa35.02■■■■□ 3.2
NEK6-211ENST00000454453 FSTL1Q12841 308 aa34.99■■■■□ 3.19
NEK6-211ENST00000454453 DNAJC10Q8IXB1 793 aa34.99■■■■□ 3.19
NEK6-211ENST00000454453 C16orf71Q8IYS4 520 aaPredicted RBP34.99■■■■□ 3.19
NEK6-211ENST00000454453 KLRG1Q96E93 195 aa34.99■■■■□ 3.19
NEK6-211ENST00000454453 RRAGCQ9HB90 399 aa34.99■■■■□ 3.19
NEK6-211ENST00000454453 IL13P35225 146 aa34.98■■■■□ 3.19
NEK6-211ENST00000454453 TRIM26Q12899 539 aaPredicted RBP34.98■■■■□ 3.19
NEK6-211ENST00000454453 USPL1Q5W0Q7 1092 aa34.98■■■■□ 3.19
NEK6-211ENST00000454453 KDM2BQ8NHM5 1336 aa34.98■■■■□ 3.19
NEK6-211ENST00000454453 TNRC6CQ9HCJ0 1690 aaKnown RBP34.98■■■■□ 3.19
NEK6-211ENST00000454453 JMYQ8N9B5 988 aa34.97■■■■□ 3.19
NEK6-211ENST00000454453 MORC1Q86VD1 984 aa34.96■■■■□ 3.19
NEK6-211ENST00000454453 SOS1Q07889 1333 aaPredicted RBP34.96■■■■□ 3.19
NEK6-211ENST00000454453 LGR6Q9HBX8 967 aa34.95■■■■□ 3.19
NEK6-211ENST00000454453 AFDNP55196 1824 aaKnown RBP34.95■■■■□ 3.18
NEK6-211ENST00000454453 HSPA5P11021 654 aaKnown RBP34.94■■■■□ 3.18
NEK6-211ENST00000454453 RASSF7Q02833 373 aa34.94■■■■□ 3.18
NEK6-211ENST00000454453 NRXN2Q9P2S2 1712 aa34.94■■■■□ 3.18
NEK6-211ENST00000454453 PCNTO95613 3336 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms