RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SOS2Q07890 1332 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 DPYDQ12882 1025 aa6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 CBLBQ13191 982 aa6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 PPP1R26Q5T8A7 1209 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 IRF7Q92985 503 aa6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 STK17AQ9UEE5 414 aa6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 DNMT3LQ9UJW3 386 aa6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 KIAA1024Q9UPX6 916 aa6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 PCDHGA11Q9Y5H2 935 aa6.58□□□□□ -1.36
HMGB1P15-201ENST00000453854 GTF2IP78347 998 aa6.57□□□□□ -1.36
HMGB1P15-201ENST00000453854 SND1Q7KZF4 910 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P15-201ENST00000453854 NPM2Q86SE8 214 aaKnown RBP6.57□□□□□ -1.36
HMGB1P15-201ENST00000453854 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
HMGB1P15-201ENST00000453854 KCTD15Q96SI1 283 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P15-201ENST00000453854 EMILIN1Q9Y6C2 1016 aa6.57□□□□□ -1.36
HMGB1P15-201ENST00000453854 MAN1A2O60476 641 aa6.56□□□□□ -1.36
HMGB1P15-201ENST00000453854 USP4Q13107 963 aa6.56□□□□□ -1.36
HMGB1P15-201ENST00000453854 OXLD1Q5BKU9 147 aa6.56□□□□□ -1.36
HMGB1P15-201ENST00000453854 C1orf216Q8TAB5 229 aa6.56□□□□□ -1.36
HMGB1P15-201ENST00000453854 CCDC102BQ68D86 513 aa6.55□□□□□ -1.36
HMGB1P15-201ENST00000453854 Q6ZVU0 165 aa6.55□□□□□ -1.36
HMGB1P15-201ENST00000453854 ZNF594Q96JF6 807 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P15-201ENST00000453854 PCDHB11Q9Y5F2 797 aa6.55□□□□□ -1.36
HMGB1P15-201ENST00000453854 PPFIA3O75145 1194 aa6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 UPP2O95045 317 aa6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 VSIG8P0DPA2 414 aa6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 ARID4AP29374 1257 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 SEC13P55735 322 aa6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 INTS6LQ5JSJ4 861 aaKnown RBP6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 CCER1Q8TC90 406 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 TSEN34Q9BSV6 310 aaKnown RBP6.54□□□□□ -1.36
HMGB1P15-201ENST00000453854 ATP2B4P23634 1241 aa6.53□□□□□ -1.36
HMGB1P15-201ENST00000453854 OCLNQ16625 522 aa6.53□□□□□ -1.36
HMGB1P15-201ENST00000453854 TAS1R3Q7RTX0 852 aa6.53□□□□□ -1.36
HMGB1P15-201ENST00000453854 AGBL1Q96MI9 1066 aa6.53□□□□□ -1.36
HMGB1P15-201ENST00000453854 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
HMGB1P15-201ENST00000453854 FIGNL2A6NMB9 653 aa6.52□□□□□ -1.37
HMGB1P15-201ENST00000453854 TTLL8A6PVC2 850 aa6.52□□□□□ -1.37
HMGB1P15-201ENST00000453854 M0R2N6 131 aa6.52□□□□□ -1.37
HMGB1P15-201ENST00000453854 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
HMGB1P15-201ENST00000453854 ZSCAN1Q8NBB4 408 aa6.52□□□□□ -1.37
HMGB1P15-201ENST00000453854 TPCN2Q8NHX9 752 aa6.52□□□□□ -1.37
HMGB1P15-201ENST00000453854 TMPRSS4Q9NRS4 437 aa6.52□□□□□ -1.37
HMGB1P15-201ENST00000453854 SPINT1O43278 529 aa6.51□□□□□ -1.37
HMGB1P15-201ENST00000453854 RANGAP1P46060 587 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P15-201ENST00000453854 ERVK-9P63128 1117 aa6.51□□□□□ -1.37
HMGB1P15-201ENST00000453854 CCDC27Q2M243 656 aa6.51□□□□□ -1.37
HMGB1P15-201ENST00000453854 PGPEP1Q9NXJ5 209 aa6.51□□□□□ -1.37
HMGB1P15-201ENST00000453854 SFI1A8K8P3 1242 aa6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 ADD1P35611 737 aaKnown RBP6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 CTSOP43234 321 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 SCTRP47872 440 aa6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 RAB15P59190 212 aa6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 PTSQ03393 145 aa6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 GPR161Q8N6U8 529 aaKnown RBP6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 KDF1Q8NAX2 398 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 ZNF784Q8NCA9 323 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 CXXC1Q9P0U4 656 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 RBM19Q9Y4C8 960 aaKnown RBP6.5□□□□□ -1.37
HMGB1P15-201ENST00000453854 WASLO00401 505 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 LILRA1O75019 489 aa6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 MYCP01106 439 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 WEE1P30291 646 aa6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 RELBQ01201 579 aa6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 KRT76Q01546 638 aa6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 INSM2Q96T92 566 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P15-201ENST00000453854 SOWAHDA6NJG2 315 aa6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 TMEM229AB2RXF0 380 aa6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 PRMT3O60678 531 aa6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 DHX9Q08211 1270 aaKnown RBP6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 CC2D2BQ6DHV5 1058 aa6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 TRIM52Q96A61 297 aa6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 OSBPL3Q9H4L5 887 aa6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 ZNF395Q9H8N7 513 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P15-201ENST00000453854 SCNN1DP51172 638 aa6.47□□□□□ -1.37
HMGB1P15-201ENST00000453854 PSME1Q06323 249 aa6.47□□□□□ -1.37
HMGB1P15-201ENST00000453854 PRIMPOLQ96LW4 560 aa6.47□□□□□ -1.37
HMGB1P15-201ENST00000453854 EGFL7Q9UHF1 273 aa6.47□□□□□ -1.37
HMGB1P15-201ENST00000453854 AMOTL2Q9Y2J4 779 aa6.47□□□□□ -1.37
HMGB1P15-201ENST00000453854 SCNN1AP37088 669 aa6.46□□□□□ -1.38
HMGB1P15-201ENST00000453854 SERPINB4P48594 390 aa6.46□□□□□ -1.38
HMGB1P15-201ENST00000453854 CCDC155Q8N6L0 562 aa6.46□□□□□ -1.38
HMGB1P15-201ENST00000453854 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB1P15-201ENST00000453854 TSEN2Q8NCE0 465 aaKnown RBP6.46□□□□□ -1.38
HMGB1P15-201ENST00000453854 ZNF358Q9NW07 568 aa6.46□□□□□ -1.38
HMGB1P15-201ENST00000453854 SENP3-EIF4A1A0A087X0R7 540 aa6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 SLC35F4A4IF30 521 aa6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 FOXD4L5Q5VV16 416 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 RNF217Q8TC41 542 aa6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 FOXD4L4Q8WXT5 416 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 COL26A1Q96A83 441 aa6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 SLC4A9Q96Q91 983 aa6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 HINFPQ9BQA5 517 aa6.45□□□□□ -1.38
HMGB1P15-201ENST00000453854 INHAP05111 366 aa6.44□□□□□ -1.38
HMGB1P15-201ENST00000453854 ADH1AP07327 375 aa6.44□□□□□ -1.38
HMGB1P15-201ENST00000453854 EPHA4P54764 986 aa6.44□□□□□ -1.38
HMGB1P15-201ENST00000453854 GDF10P55107 478 aa6.44□□□□□ -1.38
HMGB1P15-201ENST00000453854 DNAJC14Q6Y2X3 702 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms